Literature DB >> 21201543

(Z)-5-(4-Fluoro-benzyl-idene)-1,3-thia-zolidine-2,4-dione.

Hong-Shun Sun1, Ye-Ming Xu, Wei He, Shi-Gui Tang, Cheng Guo.   

Abstract

In the title compound, C(10)H(6)FNO(2)S, the benzene and thia-zolidine rings make a dihedral angle of 7.52 (3)°. Intra-molecular C-H⋯O and C-H⋯S hydrogen bonds result in the formation of nearly planar five- and six-membered rings; the adjacent rings are nearly coplanar. In the crystal structure, inter-molecular N-H⋯O hydrogen bonds link the mol-ecules.

Entities:  

Year:  2008        PMID: 21201543      PMCID: PMC2960296          DOI: 10.1107/S1600536807068316

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For general background, see: Barreca et al. (2002 ▶); Botti et al. (1996 ▶). For a related structure, see: Guo et al. (2006 ▶). For bond-length data, see: Allen et al. (1987 ▶).

Experimental

Crystal data

C10H6FNO2S M = 223.22 Orthorhombic, a = 26.519 (5) Å b = 36.509 (7) Å c = 3.8490 (8) Å V = 3726.6 (13) Å3 Z = 16 Mo Kα radiation μ = 0.34 mm−1 T = 294 (2) K 0.30 × 0.10 × 0.10 mm

Data collection

Enraf–Nonius CAD-4 diffractometer Absorption correction: ψ scan (North et al., 1968 ▶) T min = 0.905, T max = 0.967 2087 measured reflections 1059 independent reflections 790 reflections with I > 2σ(I) R int = 0.042 3 standard reflections frequency: 120 min intensity decay: none

Refinement

R[F 2 > 2σ(F 2)] = 0.053 wR(F 2) = 0.121 S = 1.04 1059 reflections 136 parameters 1 restraint H-atom parameters constrained Δρmax = 0.38 e Å−3 Δρmin = −0.66 e Å−3 Absolute structure: Flack (1983 ▶), no Friedel pairs Flack parameter: 0.0 (2) Data collection: CAD-4 Software (Enraf–Nonius, 1989 ▶); cell refinement: CAD-4 Software; data reduction: XCAD4 (Harms & Wocadlo, 1995 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Siemens, 1996 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536807068316/hk2407sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536807068316/hk2407Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C10H6FNO2SF000 = 1824
Mr = 223.22Dx = 1.591 Mg m3
Orthorhombic, Fdd2Mo Kα radiation λ = 0.71073 Å
Hall symbol: F 2 -2dCell parameters from 25 reflections
a = 26.519 (5) Åθ = 9–13º
b = 36.509 (7) ŵ = 0.34 mm1
c = 3.8490 (8) ÅT = 294 (2) K
V = 3726.6 (13) Å3Block, colorles
Z = 160.30 × 0.10 × 0.10 mm
Enraf–Nonius CAD-4 diffractometerRint = 0.042
Radiation source: fine-focus sealed tubeθmax = 26.0º
Monochromator: graphiteθmin = 1.9º
T = 294(2) Kh = 0→32
ω/2θ scansk = 0→44
Absorption correction: ψ scan(North et al., 1968)l = −4→0
Tmin = 0.905, Tmax = 0.9673 standard reflections
2087 measured reflections every 120 min
1059 independent reflections intensity decay: none
790 reflections with I > 2σ(I)
Refinement on F2Hydrogen site location: inferred from neighbouring sites
Least-squares matrix: fullH-atom parameters constrained
R[F2 > 2σ(F2)] = 0.053  w = 1/[σ2(Fo2) + (0.05P)2 + 3P] where P = (Fo2 + 2Fc2)/3
wR(F2) = 0.121(Δ/σ)max < 0.001
S = 1.04Δρmax = 0.38 e Å3
1059 reflectionsΔρmin = −0.66 e Å3
136 parametersExtinction correction: none
1 restraintAbsolute structure: Flack (1983), no Friedel pairs
Primary atom site location: structure-invariant direct methodsFlack parameter: 0.0 (2)
Secondary atom site location: difference Fourier map
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
S0.08943 (4)−0.00189 (3)−0.0089 (5)0.0379 (3)
F−0.06109 (11)0.13395 (8)0.6207 (12)0.0681 (12)
O10.13745 (13)−0.05739 (9)−0.3062 (14)0.0619 (12)
O20.21942 (10)0.03754 (8)0.2142 (14)0.0493 (10)
N0.18501 (14)−0.01228 (9)−0.0627 (14)0.0425 (11)
H0A0.2136−0.0219−0.11500.051*
C1−0.01787 (17)0.11646 (12)0.5430 (15)0.0416 (12)
C20.02675 (18)0.13443 (12)0.5921 (16)0.0484 (15)
H2A0.02730.15840.67440.058*
C30.07078 (19)0.11621 (11)0.5166 (17)0.0444 (13)
H3A0.10150.12780.55590.053*
C40.07035 (16)0.08082 (10)0.3826 (13)0.0346 (11)
C50.02378 (16)0.06382 (12)0.3314 (15)0.0400 (12)
H5A0.02250.04020.24210.048*
C6−0.02016 (15)0.08195 (12)0.4125 (16)0.0452 (14)
H6A−0.05120.07070.37820.054*
C70.11827 (16)0.06366 (11)0.3095 (14)0.0352 (10)
H7A0.14620.07720.37820.042*
C80.12929 (15)0.03151 (11)0.1597 (14)0.0317 (10)
C90.18224 (17)0.02026 (11)0.1107 (15)0.0370 (12)
C100.14053 (17)−0.02927 (12)−0.1510 (17)0.0450 (13)
U11U22U33U12U13U23
S0.0303 (5)0.0391 (5)0.0444 (6)−0.0005 (4)0.0015 (7)−0.0028 (6)
F0.0400 (16)0.0705 (18)0.094 (3)0.0212 (14)0.003 (2)−0.024 (2)
O10.058 (2)0.0465 (17)0.081 (3)0.0105 (16)0.000 (3)−0.026 (2)
O20.0267 (16)0.0444 (16)0.077 (3)0.0002 (12)−0.0039 (19)0.001 (2)
N0.0295 (18)0.0403 (18)0.058 (3)0.0068 (15)0.001 (2)0.001 (2)
C10.033 (2)0.051 (2)0.041 (3)0.012 (2)0.003 (2)−0.009 (3)
C20.047 (3)0.042 (2)0.056 (4)0.012 (2)−0.009 (3)−0.018 (3)
C30.047 (3)0.036 (2)0.050 (3)−0.0028 (19)−0.002 (3)−0.007 (3)
C40.031 (2)0.036 (2)0.036 (3)0.0030 (17)−0.002 (2)−0.002 (2)
C50.035 (2)0.038 (2)0.047 (3)0.0012 (17)−0.001 (2)−0.006 (2)
C60.0209 (18)0.056 (3)0.058 (4)−0.0019 (18)0.007 (2)−0.018 (3)
C70.030 (2)0.042 (2)0.033 (3)−0.0057 (17)0.000 (2)0.008 (2)
C80.024 (2)0.040 (2)0.031 (3)0.0007 (16)−0.003 (2)0.009 (2)
C90.032 (2)0.037 (2)0.042 (3)0.0039 (18)−0.001 (2)0.011 (2)
C100.038 (2)0.042 (2)0.055 (4)0.0065 (19)−0.002 (3)0.002 (3)
S—C81.739 (4)C2—H2A0.9300
S—C101.770 (5)C3—C41.391 (6)
F—C11.346 (5)C3—H3A0.9300
O1—C101.191 (6)C4—C51.396 (6)
O2—C91.237 (5)C4—C71.445 (6)
N—C91.364 (6)C5—C61.376 (6)
N—C101.375 (6)C5—H5A0.9300
N—H0A0.8600C6—H6A0.9300
C1—C61.358 (6)C7—C81.340 (6)
C1—C21.366 (7)C7—H7A0.9300
C2—C31.375 (6)C8—C91.475 (6)
C8—S—C1092.6 (2)C6—C5—H5A119.9
C9—N—C10117.9 (4)C4—C5—H5A119.9
C9—N—H0A121.1C1—C6—C5119.5 (4)
C10—N—H0A121.1C1—C6—H6A120.3
F—C1—C6119.0 (4)C5—C6—H6A120.3
F—C1—C2118.6 (4)C8—C7—C4131.0 (4)
C6—C1—C2122.4 (4)C8—C7—H7A114.5
C1—C2—C3118.3 (4)C4—C7—H7A114.5
C1—C2—H2A120.9C7—C8—C9120.4 (4)
C3—C2—H2A120.9C7—C8—S129.9 (3)
C2—C3—C4121.4 (4)C9—C8—S109.6 (3)
C2—C3—H3A119.3O2—C9—N124.0 (4)
C4—C3—H3A119.3O2—C9—C8125.1 (4)
C3—C4—C5118.2 (4)N—C9—C8110.9 (4)
C3—C4—C7117.9 (4)O1—C10—N124.9 (4)
C5—C4—C7123.9 (4)O1—C10—S126.1 (4)
C6—C5—C4120.2 (4)N—C10—S109.0 (3)
F—C1—C2—C3179.1 (5)C4—C7—C8—S0.6 (9)
C6—C1—C2—C3−2.2 (9)C10—S—C8—C7177.2 (5)
C1—C2—C3—C42.1 (9)C10—S—C8—C9−1.5 (4)
C2—C3—C4—C5−1.0 (8)C10—N—C9—O2177.5 (5)
C2—C3—C4—C7179.8 (5)C10—N—C9—C8−1.9 (6)
C3—C4—C5—C60.0 (8)C7—C8—C9—O23.9 (8)
C7—C4—C5—C6179.1 (5)S—C8—C9—O2−177.2 (4)
F—C1—C6—C5179.8 (5)C7—C8—C9—N−176.7 (4)
C2—C1—C6—C51.2 (9)S—C8—C9—N2.2 (5)
C4—C5—C6—C1−0.1 (9)C9—N—C10—O1178.9 (6)
C3—C4—C7—C8−174.7 (5)C9—N—C10—S0.7 (6)
C5—C4—C7—C86.3 (9)C8—S—C10—O1−177.6 (6)
C4—C7—C8—C9179.3 (5)C8—S—C10—N0.6 (5)
D—H···AD—HH···AD···AD—H···A
N—H0A···O2i0.861.982.830 (5)171
C5—H5A···S0.932.543.241 (5)133
C7—H7A···O20.932.502.870 (5)104
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N—H0A⋯O2i0.861.982.830 (5)171
C5—H5A⋯S0.932.543.241 (5)133
C7—H7A⋯O20.932.502.870 (5)104

Symmetry code: (i) .

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