Literature DB >> 21201520

(E)-2-Meth-oxy-6-[(5-methyl-isoxazol-3-yl)imino-meth-yl]phenol.

Ren-Gao Zhao, Jie Lu, Ji-Kun Li.   

Abstract

In the title mol-ecule, C(12)H(12)N(2)O(3), the benzene and isoxazole rings form a dihedral angle of 5.9 (6)°. The hydr-oxy group is involved in an intra-molecular O-H⋯N hydrogen bond [O⋯N = 2.616 (5) Å], resulting in approximate planarity of the mol-ecular skeleton. In the crystal structure, mol-ecules related by translation along the c axis are stacked into columns, the shortest inter-molecular CC distance being 3.298 (6) Å.

Entities:  

Year:  2008        PMID: 21201520      PMCID: PMC2960214          DOI: 10.1107/S1600536808001888

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related crystal structures, see Li et al. (2007 ▶). For general background, see Garnovskii et al. (1993 ▶).

Experimental

Crystal data

C12H12N2O3 M = 232.24 Orthorhombic, a = 22.254 (5) Å b = 10.178 (5) Å c = 4.836 (2) Å V = 1095.4 (8) Å3 Z = 4 Mo Kα radiation μ = 0.10 mm−1 T = 273 (2) K 0.12 × 0.10 × 0.08 mm

Data collection

Bruker SMART CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.988, T max = 0.992 3720 measured reflections 1079 independent reflections 651 reflections with I > 2σ(I) R int = 0.069

Refinement

R[F 2 > 2σ(F 2)] = 0.050 wR(F 2) = 0.122 S = 1.02 1079 reflections 156 parameters H-atom parameters constrained Δρmax = 0.24 e Å−3 Δρmin = −0.19 e Å−3 Data collection: SMART (Siemens, 1996 ▶); cell refinement: SMART; data reduction: SAINT (Siemens, 1996 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536808001888/cv2374sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808001888/cv2374Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C12H12N2O3F000 = 488
Mr = 232.24Dx = 1.408 Mg m3Dm = 1.408 Mg m3Dm measured by not measured
Orthorhombic, Pna21Mo Kα radiation λ = 0.71073 Å
Hall symbol: P 2c -2nCell parameters from 401 reflections
a = 22.254 (5) Åθ = 2.7–18.4º
b = 10.178 (5) ŵ = 0.10 mm1
c = 4.836 (2) ÅT = 273 (2) K
V = 1095.4 (8) Å3Block, orange
Z = 40.12 × 0.10 × 0.08 mm
Bruker SMART CCD area-detector diffractometer1079 independent reflections
Radiation source: sealed tube651 reflections with I > 2σ(I)
Monochromator: graphiteRint = 0.069
T = 273(2) Kθmax = 25.1º
φ and ω scansθmin = 1.8º
Absorption correction: multi-scan(SADABS; Sheldrick, 1996)h = −26→12
Tmin = 0.988, Tmax = 0.992k = −11→10
3720 measured reflectionsl = −5→5
Refinement on F2Hydrogen site location: inferred from neighbouring sites
Least-squares matrix: fullH-atom parameters constrained
R[F2 > 2σ(F2)] = 0.050  w = 1/[σ2(Fo2) + (0.052P)2] where P = (Fo2 + 2Fc2)/3
wR(F2) = 0.122(Δ/σ)max < 0.001
S = 1.02Δρmax = 0.24 e Å3
1079 reflectionsΔρmin = −0.19 e Å3
156 parametersExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.009 (3)
Secondary atom site location: difference Fourier map
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.38927 (16)0.1624 (3)0.1475 (8)0.0589 (12)
H10.36050.17110.04330.088*
O20.47481 (17)0.1609 (3)0.5178 (8)0.0642 (12)
O30.19927 (17)0.2331 (3)−0.6386 (9)0.0630 (12)
N10.30586 (18)0.2894 (4)−0.1253 (10)0.0435 (11)
N20.2451 (2)0.1937 (4)−0.4528 (11)0.0600 (14)
C10.3990 (2)0.2760 (5)0.2836 (10)0.0439 (14)
C20.4440 (2)0.2775 (5)0.4844 (12)0.0493 (15)
C30.4554 (2)0.3904 (5)0.6332 (11)0.0507 (14)
H30.48560.39130.76600.061*
C40.4214 (2)0.5035 (5)0.5842 (12)0.0521 (15)
H40.42860.57920.68670.062*
C50.3773 (2)0.5031 (5)0.3843 (12)0.0488 (13)
H50.35510.57900.35200.059*
C60.3655 (2)0.3901 (5)0.2295 (10)0.0408 (13)
C70.5192 (3)0.1552 (6)0.7308 (13)0.0709 (19)
H7A0.55050.21740.69200.106*
H7B0.53590.06830.73840.106*
H7C0.50090.17600.90540.106*
C80.3197 (2)0.3922 (5)0.0215 (11)0.0448 (13)
H80.29900.4702−0.00980.054*
C90.2608 (2)0.3021 (5)−0.3245 (11)0.0457 (14)
C100.2266 (2)0.4109 (5)−0.4155 (12)0.0512 (15)
H100.22950.4971−0.35360.061*
C110.1892 (2)0.3643 (5)−0.6087 (11)0.0464 (14)
C120.1426 (2)0.4195 (6)−0.7923 (12)0.0658 (18)
H12A0.13720.3628−0.94890.099*
H12B0.15480.5050−0.85440.099*
H12C0.10540.4266−0.69280.099*
U11U22U33U12U13U23
O10.069 (3)0.040 (2)0.068 (3)0.0036 (19)−0.016 (2)−0.009 (2)
O20.068 (3)0.056 (2)0.069 (3)0.016 (2)−0.019 (2)−0.004 (2)
O30.070 (3)0.049 (2)0.070 (3)−0.006 (2)−0.013 (2)−0.007 (2)
N10.045 (3)0.036 (2)0.049 (2)−0.002 (2)−0.002 (2)−0.003 (2)
N20.068 (3)0.041 (3)0.071 (3)−0.009 (2)−0.027 (3)0.002 (3)
C10.046 (3)0.041 (3)0.045 (3)−0.009 (3)−0.004 (3)0.000 (3)
C20.049 (4)0.044 (3)0.056 (4)0.003 (3)0.007 (3)−0.001 (3)
C30.048 (3)0.055 (3)0.049 (3)−0.003 (3)−0.002 (3)−0.005 (3)
C40.060 (4)0.044 (3)0.052 (3)−0.009 (3)0.006 (3)−0.002 (3)
C50.056 (3)0.036 (3)0.055 (3)−0.001 (3)0.000 (4)−0.004 (3)
C60.041 (3)0.034 (3)0.047 (3)0.002 (3)0.003 (3)0.001 (2)
C70.069 (4)0.078 (4)0.065 (4)0.027 (3)−0.011 (4)−0.002 (4)
C80.042 (3)0.038 (3)0.055 (3)0.004 (3)0.004 (3)0.000 (3)
C90.050 (4)0.038 (3)0.049 (3)−0.007 (3)0.008 (3)−0.003 (3)
C100.056 (4)0.039 (3)0.059 (4)0.007 (3)−0.003 (3)−0.007 (3)
C110.047 (4)0.045 (3)0.048 (3)−0.001 (3)0.007 (3)−0.006 (3)
C120.064 (4)0.073 (4)0.061 (4)0.008 (3)−0.011 (4)−0.005 (4)
O1—C11.348 (5)C4—H40.9300
O1—H10.8200C5—C61.397 (7)
O2—C21.379 (6)C5—H50.9300
O2—C71.428 (6)C6—C81.433 (7)
O3—C111.362 (6)C7—H7A0.9600
O3—N21.417 (6)C7—H7B0.9600
N1—C81.301 (6)C7—H7C0.9600
N1—C91.397 (7)C8—H80.9300
N2—C91.313 (5)C9—C101.413 (6)
C1—C21.395 (7)C10—C111.338 (7)
C1—C61.405 (7)C10—H100.9300
C2—C31.379 (7)C11—C121.477 (7)
C3—C41.397 (7)C12—H12A0.9600
C3—H30.9300C12—H12B0.9600
C4—C51.377 (7)C12—H12C0.9600
C4···C8i3.298 (6)C6···C9i3.299 (6)
C1—O1—H1109.5O2—C7—H7B109.5
C2—O2—C7117.5 (4)H7A—C7—H7B109.5
C11—O3—N2109.2 (4)O2—C7—H7C109.5
C8—N1—C9118.2 (4)H7A—C7—H7C109.5
C9—N2—O3104.7 (4)H7B—C7—H7C109.5
O1—C1—C2117.7 (5)N1—C8—C6122.6 (5)
O1—C1—C6122.2 (5)N1—C8—H8118.7
C2—C1—C6120.1 (5)C6—C8—H8118.7
O2—C2—C3124.4 (5)N2—C9—N1116.0 (5)
O2—C2—C1115.4 (5)N2—C9—C10111.6 (5)
C3—C2—C1120.2 (5)N1—C9—C10132.3 (5)
C2—C3—C4119.9 (5)C11—C10—C9106.0 (5)
C2—C3—H3120.0C11—C10—H10127.0
C4—C3—H3120.0C9—C10—H10127.0
C5—C4—C3120.1 (5)C10—C11—O3108.6 (5)
C5—C4—H4119.9C10—C11—C12136.3 (5)
C3—C4—H4119.9O3—C11—C12115.1 (5)
C4—C5—C6120.8 (5)C11—C12—H12A109.5
C4—C5—H5119.6C11—C12—H12B109.5
C6—C5—H5119.6H12A—C12—H12B109.5
C5—C6—C1118.8 (5)C11—C12—H12C109.5
C5—C6—C8119.8 (5)H12A—C12—H12C109.5
C1—C6—C8121.4 (5)H12B—C12—H12C109.5
O2—C7—H7A109.5
C11—O3—N2—C9−0.8 (5)O1—C1—C6—C8−1.2 (7)
C7—O2—C2—C33.5 (8)C2—C1—C6—C8179.0 (4)
C7—O2—C2—C1−176.8 (4)C9—N1—C8—C6−179.5 (4)
O1—C1—C2—O21.2 (7)C5—C6—C8—N1−178.6 (5)
C6—C1—C2—O2−179.0 (5)C1—C6—C8—N11.0 (7)
O1—C1—C2—C3−179.0 (5)O3—N2—C9—N1179.6 (4)
C6—C1—C2—C30.8 (7)O3—N2—C9—C100.8 (6)
O2—C2—C3—C4−179.8 (5)C8—N1—C9—N2−175.0 (5)
C1—C2—C3—C40.5 (8)C8—N1—C9—C103.5 (8)
C2—C3—C4—C5−1.1 (8)N2—C9—C10—C11−0.5 (6)
C3—C4—C5—C60.5 (8)N1—C9—C10—C11−179.0 (5)
C4—C5—C6—C10.8 (7)C9—C10—C11—O3−0.1 (5)
C4—C5—C6—C8−179.6 (4)C9—C10—C11—C12−178.7 (6)
O1—C1—C6—C5178.4 (5)N2—O3—C11—C100.6 (5)
C2—C1—C6—C5−1.4 (7)N2—O3—C11—C12179.5 (4)
D—H···AD—HH···AD···AD—H···A
O1—H1···N10.821.892.616 (5)147
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O1—H1⋯N10.821.892.616 (5)147
  1 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

  1 in total
  1 in total

1.  (E)-2-[(6-Ethoxy-benzothia-zol-2-yl)imino-meth-yl]-6-methoxy-phenol.

Authors:  Ling-Qian Kong
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-03-25
  1 in total

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