Literature DB >> 21201519

6,10,16,19-Tetra-oxatrispiro-[4.2.2.4.2.2]nona-deca-ne.

Ji-Kui Wang1, Hai-Bo Wang, Cong-Ren Wu, Jin-Tang Wang.   

Abstract

The asymmetric unit of the title compound, C(15)H(24)O(4), contains one half-mol-ecule; a twofold rotation axis passes through the central C atom. The non-planar six- and five-membered rings adopt chair and envelope conformations, respectively. In the crystal structure, inter-molecular C-H⋯O hydrogen bonds link the mol-ecules.

Entities:  

Year:  2008        PMID: 21201519      PMCID: PMC2960158          DOI: 10.1107/S1600536808001785

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For general background, see: Jermy & Pandurangan (2005 ▶). For related literature, see: Sun et al. (2001 ▶). For ring conformation puckering parameters, see: Cremer & Pople (1975 ▶). For bond-length data, see: Allen et al. (1987 ▶).

Experimental

Crystal data

C15H24O4 M = 268.34 Monoclinic, a = 25.605 (5) Å b = 5.5820 (11) Å c = 10.337 (2) Å β = 90.22 (3)° V = 1477.4 (5) Å3 Z = 4 Mo Kα radiation μ = 0.09 mm−1 T = 294 (2) K 0.30 × 0.20 × 0.10 mm

Data collection

Enraf–Nonius CAD-4 diffractometer Absorption correction: ψ scan (North et al., 1968 ▶) T min = 0.965, T max = 0.982 1547 measured reflections 1457 independent reflections 864 reflections with I > 2σ(I) R int = 0.050 3 standard reflections frequency: 120 min intensity decay: none

Refinement

R[F 2 > 2σ(F 2)] = 0.067 wR(F 2) = 0.173 S = 0.93 1457 reflections 87 parameters H-atom parameters constrained Δρmax = 0.26 e Å−3 Δρmin = −0.21 e Å−3 Data collection: CAD-4 Software (Enraf–Nonius, 1989 ▶); cell refinement: CAD-4 Software; data reduction: XCAD4 (Harms & Wocadlo, 1995 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: PLATON (Spek, 2003 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536808001785/hk2414sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808001785/hk2414Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C15H24O4F000 = 584
Mr = 268.34Dx = 1.206 Mg m3
Monoclinic, C2/cMelting point: 401 K
Hall symbol: -C 2ycMo Kα radiation λ = 0.71073 Å
a = 25.605 (5) ÅCell parameters from 25 reflections
b = 5.5820 (11) Åθ = 10–13º
c = 10.337 (2) ŵ = 0.09 mm1
β = 90.22 (3)ºT = 294 (2) K
V = 1477.4 (5) Å3Block, colorless
Z = 40.30 × 0.20 × 0.10 mm
Enraf–Nonius CAD-4 diffractometerRint = 0.050
Radiation source: fine-focus sealed tubeθmax = 26.0º
Monochromator: graphiteθmin = 1.6º
T = 294(2) Kh = −31→31
ω/2θ scansk = 0→6
Absorption correction: ψ scan(North et al., 1968)l = 0→12
Tmin = 0.965, Tmax = 0.9823 standard reflections
1547 measured reflections every 120 min
1457 independent reflections intensity decay: none
864 reflections with I > 2σ(I)
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.067H-atom parameters constrained
wR(F2) = 0.173  w = 1/[σ2(Fo2) + (0.06P)2 + 4.5P] where P = (Fo2 + 2Fc2)/3
S = 0.93(Δ/σ)max < 0.001
1457 reflectionsΔρmax = 0.26 e Å3
87 parametersΔρmin = −0.21 e Å3
Primary atom site location: structure-invariant direct methodsExtinction correction: none
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.43380 (7)0.3857 (4)0.41870 (16)0.0381 (5)
O20.42692 (7)0.0861 (3)0.26166 (16)0.0324 (5)
C10.30826 (17)0.3438 (9)0.3294 (5)0.0889 (15)
H1A0.28190.31250.26380.107*
H1B0.29740.48160.37970.107*
C20.31481 (15)0.1237 (9)0.4179 (4)0.0803 (13)
H2A0.29730.15140.49960.096*
H2B0.2993−0.01590.37730.096*
C30.36848 (12)0.0842 (7)0.4393 (3)0.0503 (9)
H3A0.3768−0.08350.42620.060*
H3B0.37770.12710.52740.060*
C40.35773 (13)0.3897 (7)0.2697 (3)0.0567 (10)
H4A0.36620.55880.27500.068*
H4B0.35670.34360.17920.068*
C50.39900 (11)0.2397 (5)0.3435 (3)0.0336 (7)
C60.46853 (11)0.5234 (5)0.3396 (2)0.0342 (7)
H6A0.49220.61380.39450.041*
H6B0.44840.63660.28840.041*
C70.50000.3637 (7)0.25000.0278 (8)
C80.46173 (10)0.2072 (5)0.1738 (2)0.0337 (7)
H8A0.44170.30600.11450.040*
H8B0.48090.09010.12350.040*
U11U22U33U12U13U23
O10.0461 (12)0.0405 (12)0.0275 (9)0.0017 (10)−0.0016 (8)−0.0038 (9)
O20.0368 (10)0.0236 (10)0.0368 (10)−0.0008 (9)0.0005 (8)−0.0038 (8)
C10.076 (3)0.098 (4)0.093 (3)0.005 (3)−0.001 (2)0.016 (3)
C20.069 (3)0.089 (3)0.083 (3)−0.005 (3)0.006 (2)0.009 (3)
C30.052 (2)0.053 (2)0.0460 (17)−0.0121 (17)0.0100 (15)−0.0008 (16)
C40.057 (2)0.052 (2)0.061 (2)0.0252 (18)−0.0165 (17)−0.0025 (17)
C50.0338 (14)0.0256 (15)0.0413 (15)0.0057 (12)−0.0035 (12)−0.0032 (12)
C60.0469 (16)0.0252 (15)0.0306 (13)−0.0021 (13)−0.0012 (12)−0.0044 (11)
C70.040 (2)0.023 (2)0.0204 (16)0.000−0.0036 (15)0.000
C80.0393 (15)0.0322 (16)0.0296 (13)−0.0017 (13)−0.0019 (12)−0.0004 (12)
O1—C51.434 (3)C3—H3B0.9700
O1—C61.434 (3)C4—C51.547 (4)
O2—C51.402 (3)C4—H4A0.9700
O2—C81.443 (3)C4—H4B0.9700
C1—C41.434 (5)C6—C71.519 (3)
C1—C21.540 (6)C6—H6A0.9700
C1—H1A0.9700C6—H6B0.9700
C1—H1B0.9700C7—C6i1.519 (3)
C2—C31.408 (5)C7—C81.529 (3)
C2—H2A0.9700C7—C8i1.529 (3)
C2—H2B0.9700C8—H8A0.9700
C3—C51.533 (4)C8—H8B0.9700
C3—H3A0.9700
C5—O1—C6112.37 (19)H4A—C4—H4B108.6
C5—O2—C8114.2 (2)O2—C5—O1110.9 (2)
C4—C1—C2107.7 (4)O2—C5—C3107.8 (2)
C4—C1—H1A110.2O1—C5—C3106.8 (2)
C2—C1—H1A110.2O2—C5—C4112.5 (2)
C4—C1—H1B110.2O1—C5—C4112.4 (2)
C2—C1—H1B110.2C3—C5—C4106.0 (3)
H1A—C1—H1B108.5O1—C6—C7111.4 (2)
C3—C2—C1108.8 (4)O1—C6—H6A109.4
C3—C2—H2A109.9C7—C6—H6A109.4
C1—C2—H2A109.9O1—C6—H6B109.4
C3—C2—H2B109.9C7—C6—H6B109.4
C1—C2—H2B109.9H6A—C6—H6B108.0
H2A—C2—H2B108.3C6—C7—C6i108.1 (3)
C2—C3—C5108.0 (3)C6—C7—C8107.99 (15)
C2—C3—H3A110.1C6i—C7—C8111.22 (14)
C5—C3—H3A110.1C6—C7—C8i111.22 (14)
C2—C3—H3B110.1C6i—C7—C8i107.99 (15)
C5—C3—H3B110.1C8—C7—C8i110.3 (3)
H3A—C3—H3B108.4O2—C8—C7109.86 (18)
C1—C4—C5107.1 (3)O2—C8—H8A109.7
C1—C4—H4A110.3C7—C8—H8A109.7
C5—C4—H4A110.3O2—C8—H8B109.7
C1—C4—H4B110.3C7—C8—H8B109.7
C5—C4—H4B110.3H8A—C8—H8B108.2
D—H···AD—HH···AD···AD—H···A
C6—H6B···O2ii0.972.583.413 (4)143
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C6—H6B⋯O2i0.972.583.413 (4)143

Symmetry code: (i) .

  1 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

  1 in total
  1 in total

1.  7,11,18,21-Tetra-oxatrispiro-[5.2.2.5.2.2]heneicosa-ne.

Authors:  Jiang-Hua Shi; Xian-You Yuan; Min Zhang; Seik Weng Ng
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-10-10
  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.