Literature DB >> 21201475

(S)-2-(3-Nitro-phen-yl)-1,2-dihydro-quinazolin-4(3H)-one.

Lijun Zhang1, Jiarong Li, Daxin Shi, Ling Zhang, Yanqiu Fan.   

Abstract

In the racemic title compound, C(14)H(11)N(3)O(3), the pyrimidine ring has an envelope conformation with the puckering parameters Q = 0.3338 (17) Å, Θ = 60.1 (3) and ϕ = 290.4 (3)°. The two N-H groups form hydrogen bonds with symmetry-related mol-ecules, building a two-dimensional network parallel to the (10) plane.

Entities:  

Year:  2008        PMID: 21201475      PMCID: PMC2960258          DOI: 10.1107/S1600536807066251

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related literature, see: Bernstein et al. (1995 ▶); Cremer & Pople (1975 ▶); Etter et al. (1990 ▶); Chen et al. (2007 ▶).

Experimental

Crystal data

C14H11N3O3 M = 269.26 Monoclinic, a = 10.9766 (13) Å b = 9.8626 (9) Å c = 11.7636 (14) Å β = 109.697 (7)° V = 1199.0 (2) Å3 Z = 4 Mo Kα radiation μ = 0.11 mm−1 T = 113 (2) K 0.16 × 0.12 × 0.10 mm

Data collection

Rigaku Saturn diffractometer Absorption correction: multi-scan (CrystalClear; Rigaku, 2004 ▶) T min = 0.981, T max = 0.988 12847 measured reflections 2358 independent reflections 2209 reflections with I > 2σ(I) R int = 0.043

Refinement

R[F 2 > 2σ(F 2)] = 0.053 wR(F 2) = 0.134 S = 1.15 2358 reflections 187 parameters 2 restraints H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.30 e Å−3 Δρmin = −0.27 e Å−3 Data collection: CrystalClear (Rigaku, 2004 ▶); cell refinement: CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXS97 (Sheldrick, 1997 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997 ▶); molecular graphics: ORTEPIII (Burnett & Johnson, 1996 ▶), ORTEP-3 for Windows (Farrugia, 1997 ▶) and CAMERON (Watkin et al., 1993 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536807066251/dn2300sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536807066251/dn2300Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C14H11N3O3F000 = 560
Mr = 269.26Dx = 1.492 Mg m3
Monoclinic, P21/nMo Kα radiation λ = 0.71070 Å
Hall symbol: -P 2ynCell parameters from 4115 reflections
a = 10.9766 (13) Åθ = 1.8–27.9º
b = 9.8626 (9) ŵ = 0.11 mm1
c = 11.7636 (14) ÅT = 113 (2) K
β = 109.697 (7)ºBlock, yellow
V = 1199.0 (2) Å30.16 × 0.12 × 0.10 mm
Z = 4
Rigaku Saturn diffractometer2358 independent reflections
Radiation source: rotating anode2209 reflections with I > 2σ(I)
Monochromator: confocalRint = 0.043
Detector resolution: 14.63 pixels mm-1θmax = 26.0º
T = 113(2) Kθmin = 2.2º
ω scansh = −13→13
Absorption correction: multi-scan(CrystalClear; Rigaku, 2004)k = −12→12
Tmin = 0.981, Tmax = 0.988l = −14→14
12847 measured reflections
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.053H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.134  w = 1/[σ2(Fo2) + (0.0628P)2 + 0.2875P] where P = (Fo2 + 2Fc2)/3
S = 1.15(Δ/σ)max = 0.001
2358 reflectionsΔρmax = 0.30 e Å3
187 parametersΔρmin = −0.27 e Å3
2 restraintsExtinction correction: none
Primary atom site location: structure-invariant direct methods
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.38313 (11)0.37578 (12)0.01748 (10)0.0300 (3)
O20.88573 (16)0.82212 (18)0.63964 (16)0.0661 (6)
O31.00163 (13)0.66568 (15)0.59857 (12)0.0405 (4)
N10.59073 (14)0.40329 (15)0.13946 (12)0.0251 (3)
H10.5980 (18)0.4683 (15)0.0939 (15)0.030*
N20.69081 (13)0.25348 (14)0.30194 (13)0.0241 (3)
H20.7543 (14)0.2352 (19)0.3656 (12)0.029*
N30.89721 (16)0.71853 (17)0.58678 (14)0.0369 (4)
C10.47429 (16)0.34319 (17)0.11042 (15)0.0248 (4)
C20.46290 (16)0.23302 (17)0.19167 (14)0.0237 (4)
C30.57453 (16)0.19070 (17)0.28587 (14)0.0226 (4)
C40.56527 (17)0.07855 (17)0.35660 (15)0.0265 (4)
H40.63790.04820.41850.032*
C50.44777 (17)0.01378 (18)0.33363 (16)0.0287 (4)
H50.4425−0.06060.38030.034*
C60.33707 (18)0.05748 (18)0.24215 (16)0.0299 (4)
H60.25840.01380.22880.036*
C70.34564 (17)0.16652 (18)0.17147 (16)0.0272 (4)
H70.27230.19580.10980.033*
C80.69237 (16)0.39113 (17)0.25765 (14)0.0235 (4)
H80.77580.40490.24590.028*
C90.67990 (15)0.49851 (16)0.34659 (14)0.0227 (4)
C100.79123 (16)0.55921 (17)0.42414 (15)0.0248 (4)
H100.87230.53490.42200.030*
C110.77919 (17)0.65619 (17)0.50431 (15)0.0269 (4)
C120.66122 (18)0.69635 (18)0.51111 (16)0.0306 (4)
H120.65600.76330.56490.037*
C130.55171 (18)0.63387 (19)0.43545 (17)0.0326 (4)
H130.47110.65730.43910.039*
C140.56071 (17)0.53628 (18)0.35387 (16)0.0282 (4)
H140.48580.49540.30310.034*
U11U22U33U12U13U23
O10.0275 (7)0.0325 (7)0.0214 (6)−0.0004 (5)−0.0029 (5)0.0017 (5)
O20.0589 (11)0.0685 (12)0.0687 (12)−0.0165 (9)0.0185 (9)−0.0473 (10)
O30.0295 (8)0.0512 (9)0.0354 (8)−0.0077 (6)0.0040 (6)−0.0056 (6)
N10.0249 (8)0.0281 (8)0.0182 (7)−0.0030 (6)0.0018 (6)0.0025 (6)
N20.0206 (7)0.0258 (8)0.0206 (7)0.0013 (6)0.0001 (6)0.0013 (6)
N30.0398 (10)0.0399 (10)0.0290 (9)−0.0098 (8)0.0089 (7)−0.0087 (7)
C10.0261 (9)0.0254 (9)0.0202 (9)0.0000 (7)0.0042 (7)−0.0027 (7)
C20.0248 (9)0.0246 (9)0.0194 (8)0.0003 (7)0.0047 (7)−0.0027 (7)
C30.0260 (9)0.0227 (8)0.0183 (8)0.0012 (7)0.0062 (7)−0.0044 (6)
C40.0316 (9)0.0254 (9)0.0210 (9)0.0025 (7)0.0070 (7)−0.0004 (7)
C50.0393 (10)0.0244 (9)0.0246 (9)−0.0023 (8)0.0138 (8)−0.0009 (7)
C60.0305 (10)0.0310 (10)0.0309 (10)−0.0069 (8)0.0138 (8)−0.0067 (7)
C70.0239 (9)0.0313 (9)0.0246 (9)−0.0011 (7)0.0057 (7)−0.0046 (7)
C80.0213 (8)0.0277 (9)0.0183 (8)−0.0019 (7)0.0026 (7)0.0009 (6)
C90.0258 (9)0.0219 (8)0.0188 (8)−0.0004 (7)0.0056 (7)0.0044 (6)
C100.0253 (9)0.0280 (9)0.0204 (8)−0.0023 (7)0.0066 (7)0.0023 (7)
C110.0305 (10)0.0267 (9)0.0205 (9)−0.0050 (7)0.0045 (7)0.0000 (7)
C120.0397 (11)0.0254 (9)0.0256 (9)0.0033 (8)0.0097 (8)−0.0014 (7)
C130.0286 (10)0.0329 (10)0.0343 (10)0.0066 (8)0.0079 (8)0.0000 (8)
C140.0253 (9)0.0279 (9)0.0271 (9)0.0009 (7)0.0034 (7)0.0000 (7)
O1—C11.250 (2)C5—H50.9300
O2—N31.224 (2)C6—C71.382 (2)
O3—N31.224 (2)C6—H60.9300
N1—C11.344 (2)C7—H70.9300
N1—C81.465 (2)C8—C91.527 (2)
N1—H10.857 (9)C8—H80.9800
N2—C31.373 (2)C9—C101.390 (2)
N2—C81.456 (2)C9—C141.390 (2)
N2—H20.853 (9)C10—C111.381 (2)
N3—C111.466 (2)C10—H100.9300
C1—C21.480 (2)C11—C121.382 (3)
C2—C71.392 (2)C12—C131.377 (3)
C2—C31.410 (2)C12—H120.9300
C3—C41.408 (2)C13—C141.386 (3)
C4—C51.382 (2)C13—H130.9300
C4—H40.9300C14—H140.9300
C5—C61.392 (3)
C1—N1—C8124.04 (14)C6—C7—C2120.70 (16)
C1—N1—H1116.9 (13)C6—C7—H7119.7
C8—N1—H1116.9 (13)C2—C7—H7119.7
C3—N2—C8119.58 (14)N2—C8—N1108.59 (13)
C3—N2—H2118.2 (13)N2—C8—C9112.76 (13)
C8—N2—H2114.0 (13)N1—C8—C9112.21 (13)
O3—N3—O2123.41 (17)N2—C8—H8107.7
O3—N3—C11118.77 (15)N1—C8—H8107.7
O2—N3—C11117.82 (17)C9—C8—H8107.7
O1—C1—N1121.41 (16)C10—C9—C14118.78 (16)
O1—C1—C2122.46 (15)C10—C9—C8119.10 (15)
N1—C1—C2116.08 (14)C14—C9—C8122.11 (15)
C7—C2—C3120.22 (16)C11—C10—C9118.77 (16)
C7—C2—C1120.68 (15)C11—C10—H10120.6
C3—C2—C1118.99 (15)C9—C10—H10120.6
N2—C3—C4121.45 (15)C10—C11—C12123.05 (16)
N2—C3—C2119.73 (15)C10—C11—N3118.41 (16)
C4—C3—C2118.70 (16)C12—C11—N3118.53 (16)
C5—C4—C3119.74 (16)C13—C12—C11117.73 (17)
C5—C4—H4120.1C13—C12—H12121.1
C3—C4—H4120.1C11—C12—H12121.1
C4—C5—C6121.46 (17)C12—C13—C14120.52 (17)
C4—C5—H5119.3C12—C13—H13119.7
C6—C5—H5119.3C14—C13—H13119.7
C7—C6—C5119.16 (16)C13—C14—C9121.12 (16)
C7—C6—H6120.4C13—C14—H14119.4
C5—C6—H6120.4C9—C14—H14119.4
D—H···AD—HH···AD···AD—H···A
N1—H1···O1i0.857 (9)2.075 (10)2.9318 (19)179.3 (19)
N2—H2···O1ii0.853 (9)2.165 (11)2.9837 (18)160.9 (17)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1⋯O1i0.857 (9)2.075 (10)2.9318 (19)179.3 (19)
N2—H2⋯O1ii0.853 (9)2.165 (11)2.9837 (18)160.9 (17)

Symmetry codes: (i) ; (ii) .

  2 in total

1.  Molecular-docking-guided design, synthesis, and biologic evaluation of radioiodinated quinazolinone prodrugs.

Authors:  Kai Chen; Ayman F Al Aowad; S James Adelstein; Amin I Kassis
Journal:  J Med Chem       Date:  2007-01-27       Impact factor: 7.446

2.  Graph-set analysis of hydrogen-bond patterns in organic crystals.

Authors:  M C Etter; J C MacDonald; J Bernstein
Journal:  Acta Crystallogr B       Date:  1990-04-01
  2 in total
  2 in total

1.  Cyclo-hexa-nespiro-2'-[2',3',6',7'-tetra-hydro-1'H-cyclo-penta-[d]pyrimidin]-4'(5'H)-one.

Authors:  Daxin Shi; Dongfeng Qian; Qi Zhang; Jiarong Li
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-02-28

2.  2,2,7-Trimethyl-2,3-dihydro-quinazolin-4(1H)-one.

Authors:  Ling Zhang; Daxin Shi; Yanqiu Fan; Dongfeng Qian; Jiarong Li
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-05-20
  2 in total

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