| Literature DB >> 21201425 |
Abstract
The title compound, C(20)H(14)N(2)O(4)·H(2)O, was synthesized by the reaction of fluorescein and hydrazine hydrate in ethanol. In the crystal structure, the organic mol-ecules are linked into extended two-dimensional networks by inter-molecular hydrogen bonding. Additional face-to-face π-π stacking inter-actions between the phenolic benzene rings in two adjacent mol-ecules [centroid-to-centroid separation = 3.773 (3) Å] link the mol-ecules into a three-dimensional framework.Entities:
Year: 2008 PMID: 21201425 PMCID: PMC2960396 DOI: 10.1107/S1600536808000032
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C20H14N2O4·H2O | |
| Triclinic, | |
| Hall symbol: -P 1 | Mo |
| Cell parameters from 988 reflections | |
| θ = 2.4–24.3º | |
| µ = 0.11 mm−1 | |
| α = 103.857 (2)º | |
| β = 110.432 (2)º | Block, light orange |
| γ = 99.704 (2)º | 0.32 × 0.26 × 0.22 mm |
| Bruker SAMRT Apex CCD area-detector diffractometer | 2892 independent reflections |
| Radiation source: sealed tube | 1975 reflections with |
| Monochromator: graphite | |
| θmax = 25.1º | |
| phi and ω scans | θmin = 2.0º |
| Absorption correction: multi-scan(SADABS; Bruker, 1997) | |
| 4192 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H atoms treated by a mixture of independent and constrained refinement | |
| | |
| (Δ/σ)max < 0.001 | |
| 2892 reflections | Δρmax = 0.23 e Å−3 |
| 256 parameters | Δρmin = −0.21 e Å−3 |
| 2 restraints | Extinction correction: none |
| Primary atom site location: structure-invariant direct methods |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| C1 | 0.7582 (4) | 0.8546 (3) | 1.0078 (3) | 0.0383 (7) | |
| C2 | 0.8972 (4) | 0.7821 (3) | 0.9920 (3) | 0.0363 (7) | |
| C3 | 1.0760 (4) | 0.7941 (3) | 1.0832 (3) | 0.0480 (8) | |
| H3 | 1.1261 | 0.8547 | 1.1699 | 0.058* | |
| C4 | 1.1785 (4) | 0.7131 (3) | 1.0418 (3) | 0.0537 (9) | |
| H4 | 1.2993 | 0.7193 | 1.1012 | 0.064* | |
| C5 | 1.1019 (4) | 0.6226 (3) | 0.9121 (3) | 0.0514 (8) | |
| H5 | 1.1725 | 0.5688 | 0.8859 | 0.062* | |
| C6 | 0.9215 (4) | 0.6111 (3) | 0.8207 (3) | 0.0425 (7) | |
| H6 | 0.8709 | 0.5510 | 0.7337 | 0.051* | |
| C7 | 0.8206 (4) | 0.6910 (3) | 0.8629 (3) | 0.0342 (6) | |
| C8 | 0.6212 (4) | 0.6958 (2) | 0.7840 (2) | 0.0323 (6) | |
| C9 | 0.4728 (4) | 0.5651 (3) | 0.7417 (2) | 0.0322 (6) | |
| C10 | 0.4807 (4) | 0.4862 (3) | 0.8257 (3) | 0.0375 (7) | |
| H10 | 0.5825 | 0.5137 | 0.9089 | 0.045* | |
| C11 | 0.3430 (4) | 0.3696 (3) | 0.7891 (3) | 0.0409 (7) | |
| H11 | 0.3522 | 0.3195 | 0.8471 | 0.049* | |
| C12 | 0.1896 (4) | 0.3268 (3) | 0.6649 (3) | 0.0398 (7) | |
| C13 | 0.1775 (4) | 0.4022 (3) | 0.5803 (3) | 0.0426 (7) | |
| H13 | 0.0753 | 0.3747 | 0.4973 | 0.051* | |
| C14 | 0.3180 (4) | 0.5193 (3) | 0.6192 (3) | 0.0354 (6) | |
| C15 | 0.4389 (4) | 0.6917 (3) | 0.5467 (3) | 0.0340 (6) | |
| C16 | 0.4123 (4) | 0.7408 (3) | 0.4402 (3) | 0.0384 (7) | |
| H16 | 0.3018 | 0.7034 | 0.3621 | 0.046* | |
| C17 | 0.5519 (4) | 0.8459 (3) | 0.4512 (3) | 0.0372 (7) | |
| C18 | 0.7171 (4) | 0.9011 (3) | 0.5690 (3) | 0.0415 (7) | |
| H18 | 0.8112 | 0.9723 | 0.5770 | 0.050* | |
| C19 | 0.7401 (4) | 0.8499 (3) | 0.6729 (3) | 0.0399 (7) | |
| H19 | 0.8511 | 0.8870 | 0.7507 | 0.048* | |
| C20 | 0.6026 (4) | 0.7444 (2) | 0.6654 (2) | 0.0332 (6) | |
| N1 | 0.4419 (4) | 0.8470 (3) | 0.8590 (3) | 0.0480 (7) | |
| N2 | 0.6013 (3) | 0.7991 (2) | 0.8911 (2) | 0.0360 (6) | |
| O1 | 0.7722 (3) | 0.9475 (2) | 1.1028 (2) | 0.0588 (7) | |
| O2 | 0.0591 (3) | 0.2089 (2) | 0.6320 (2) | 0.0560 (6) | |
| H2 | −0.0062 | 0.1822 | 0.5509 | 0.084* | |
| O3 | 0.2926 (3) | 0.5867 (2) | 0.52644 (19) | 0.0460 (6) | |
| O4 | 0.5213 (3) | 0.8911 (2) | 0.34392 (19) | 0.0501 (6) | |
| H4A | 0.6073 | 0.9578 | 0.3637 | 0.075* | |
| O1W | 0.1874 (3) | 0.9043 (2) | 0.6353 (2) | 0.0548 (6) | |
| H1A | 0.379 (6) | 0.820 (4) | 0.896 (4) | 0.072 (14)* | |
| H1B | 0.481 (4) | 0.936 (3) | 0.889 (2) | 0.091 (14)* | |
| H1WA | 0.2675 | 0.8615 | 0.6600 | 0.16 (3)* | |
| H1WB | 0.1586 | 0.9439 | 0.7003 | 0.13 (2)* |
| C1 | 0.0487 (17) | 0.0328 (14) | 0.0279 (14) | 0.0084 (13) | 0.0136 (13) | 0.0054 (12) |
| C2 | 0.0392 (16) | 0.0332 (14) | 0.0284 (14) | 0.0057 (12) | 0.0089 (12) | 0.0061 (11) |
| C3 | 0.0485 (18) | 0.0438 (17) | 0.0339 (16) | 0.0090 (15) | 0.0035 (14) | 0.0043 (13) |
| C4 | 0.0378 (17) | 0.063 (2) | 0.0484 (19) | 0.0163 (16) | 0.0036 (15) | 0.0157 (16) |
| C5 | 0.0401 (18) | 0.0547 (19) | 0.055 (2) | 0.0219 (15) | 0.0148 (15) | 0.0115 (15) |
| C6 | 0.0410 (17) | 0.0423 (16) | 0.0359 (15) | 0.0126 (14) | 0.0117 (13) | 0.0034 (13) |
| C7 | 0.0353 (15) | 0.0317 (14) | 0.0300 (14) | 0.0065 (12) | 0.0095 (12) | 0.0078 (11) |
| C8 | 0.0351 (15) | 0.0309 (13) | 0.0261 (13) | 0.0099 (12) | 0.0100 (11) | 0.0044 (11) |
| C9 | 0.0293 (14) | 0.0337 (14) | 0.0300 (14) | 0.0100 (12) | 0.0104 (11) | 0.0061 (11) |
| C10 | 0.0374 (16) | 0.0418 (16) | 0.0289 (14) | 0.0120 (13) | 0.0103 (12) | 0.0081 (12) |
| C11 | 0.0458 (17) | 0.0408 (16) | 0.0390 (16) | 0.0125 (14) | 0.0186 (14) | 0.0153 (13) |
| C12 | 0.0347 (16) | 0.0394 (16) | 0.0427 (16) | 0.0064 (13) | 0.0168 (13) | 0.0098 (13) |
| C13 | 0.0350 (16) | 0.0464 (17) | 0.0368 (16) | 0.0057 (13) | 0.0069 (13) | 0.0127 (13) |
| C14 | 0.0335 (15) | 0.0383 (15) | 0.0322 (14) | 0.0091 (12) | 0.0115 (12) | 0.0113 (12) |
| C15 | 0.0315 (15) | 0.0325 (14) | 0.0335 (15) | 0.0059 (12) | 0.0112 (12) | 0.0082 (11) |
| C16 | 0.0364 (16) | 0.0400 (15) | 0.0310 (15) | 0.0084 (13) | 0.0064 (12) | 0.0105 (12) |
| C17 | 0.0424 (16) | 0.0368 (15) | 0.0338 (15) | 0.0152 (13) | 0.0146 (13) | 0.0120 (12) |
| C18 | 0.0407 (17) | 0.0352 (15) | 0.0400 (16) | 0.0036 (13) | 0.0120 (13) | 0.0086 (12) |
| C19 | 0.0355 (16) | 0.0391 (15) | 0.0317 (15) | 0.0033 (13) | 0.0054 (12) | 0.0057 (12) |
| C20 | 0.0335 (15) | 0.0305 (14) | 0.0292 (14) | 0.0081 (12) | 0.0089 (12) | 0.0051 (11) |
| N1 | 0.0478 (17) | 0.0555 (19) | 0.0450 (15) | 0.0277 (14) | 0.0185 (13) | 0.0150 (13) |
| N2 | 0.0363 (13) | 0.0395 (13) | 0.0299 (12) | 0.0183 (11) | 0.0110 (10) | 0.0057 (10) |
| O1 | 0.0704 (15) | 0.0539 (13) | 0.0362 (12) | 0.0245 (12) | 0.0133 (10) | −0.0055 (10) |
| O2 | 0.0523 (14) | 0.0523 (13) | 0.0484 (13) | −0.0072 (11) | 0.0124 (11) | 0.0178 (11) |
| O3 | 0.0350 (11) | 0.0515 (12) | 0.0369 (11) | −0.0028 (9) | 0.0006 (9) | 0.0206 (9) |
| O4 | 0.0568 (14) | 0.0488 (13) | 0.0396 (12) | 0.0090 (10) | 0.0116 (10) | 0.0214 (10) |
| O1W | 0.0552 (14) | 0.0654 (14) | 0.0384 (12) | 0.0146 (12) | 0.0160 (11) | 0.0133 (11) |
| C1—O1 | 1.229 (3) | C12—O2 | 1.362 (3) |
| C1—N2 | 1.356 (3) | C12—C13 | 1.375 (4) |
| C1—C2 | 1.477 (4) | C13—C14 | 1.384 (4) |
| C2—C3 | 1.381 (4) | C13—H13 | 0.9300 |
| C2—C7 | 1.388 (4) | C14—O3 | 1.380 (3) |
| C3—C4 | 1.385 (4) | C15—O3 | 1.377 (3) |
| C3—H3 | 0.9300 | C15—C16 | 1.382 (4) |
| C4—C5 | 1.391 (4) | C15—C20 | 1.394 (4) |
| C4—H4 | 0.9300 | C16—C17 | 1.381 (4) |
| C5—C6 | 1.393 (4) | C16—H16 | 0.9300 |
| C5—H5 | 0.9300 | C17—O4 | 1.362 (3) |
| C6—C7 | 1.371 (4) | C17—C18 | 1.396 (4) |
| C6—H6 | 0.9300 | C18—C19 | 1.373 (4) |
| C7—C8 | 1.523 (4) | C18—H18 | 0.9300 |
| C8—N2 | 1.497 (3) | C19—C20 | 1.389 (4) |
| C8—C20 | 1.511 (4) | C19—H19 | 0.9300 |
| C8—C9 | 1.513 (4) | N1—N2 | 1.396 (3) |
| C9—C14 | 1.384 (4) | N1—H1A | 0.81 (4) |
| C9—C10 | 1.400 (4) | N1—H1B | 0.89 (3) |
| C10—C11 | 1.373 (4) | O2—H2 | 0.8200 |
| C10—H10 | 0.9300 | O4—H4A | 0.8200 |
| C11—C12 | 1.391 (4) | O1W—H1WA | 0.8473 |
| C11—H11 | 0.9300 | O1W—H1WB | 0.8723 |
| O1—C1—N2 | 124.0 (3) | O2—C12—C11 | 117.6 (3) |
| O1—C1—C2 | 130.1 (3) | C13—C12—C11 | 119.4 (3) |
| N2—C1—C2 | 105.9 (2) | C12—C13—C14 | 119.8 (3) |
| C3—C2—C7 | 121.4 (3) | C12—C13—H13 | 120.1 |
| C3—C2—C1 | 129.7 (3) | C14—C13—H13 | 120.1 |
| C7—C2—C1 | 108.8 (2) | O3—C14—C9 | 122.5 (2) |
| C2—C3—C4 | 118.0 (3) | O3—C14—C13 | 115.0 (2) |
| C2—C3—H3 | 121.0 | C9—C14—C13 | 122.4 (3) |
| C4—C3—H3 | 121.0 | O3—C15—C16 | 115.0 (2) |
| C3—C4—C5 | 120.5 (3) | O3—C15—C20 | 122.6 (2) |
| C3—C4—H4 | 119.8 | C16—C15—C20 | 122.3 (3) |
| C5—C4—H4 | 119.8 | C17—C16—C15 | 119.2 (2) |
| C4—C5—C6 | 121.2 (3) | C17—C16—H16 | 120.4 |
| C4—C5—H5 | 119.4 | C15—C16—H16 | 120.4 |
| C6—C5—H5 | 119.4 | O4—C17—C16 | 117.5 (2) |
| C7—C6—C5 | 117.9 (3) | O4—C17—C18 | 122.6 (3) |
| C7—C6—H6 | 121.0 | C16—C17—C18 | 119.9 (3) |
| C5—C6—H6 | 121.0 | C19—C18—C17 | 119.7 (3) |
| C6—C7—C2 | 121.0 (2) | C19—C18—H18 | 120.2 |
| C6—C7—C8 | 128.1 (2) | C17—C18—H18 | 120.2 |
| C2—C7—C8 | 110.9 (2) | C18—C19—C20 | 122.0 (2) |
| N2—C8—C20 | 109.8 (2) | C18—C19—H19 | 119.0 |
| N2—C8—C9 | 109.7 (2) | C20—C19—H19 | 119.0 |
| C20—C8—C9 | 110.8 (2) | C19—C20—C15 | 117.0 (2) |
| N2—C8—C7 | 99.09 (19) | C19—C20—C8 | 121.8 (2) |
| C20—C8—C7 | 113.7 (2) | C15—C20—C8 | 121.0 (2) |
| C9—C8—C7 | 113.1 (2) | N2—N1—H1A | 108 (3) |
| C14—C9—C10 | 116.4 (2) | N2—N1—H1B | 108.0 (14) |
| C14—C9—C8 | 121.5 (2) | H1A—N1—H1B | 110 (3) |
| C10—C9—C8 | 122.1 (2) | C1—N2—N1 | 124.5 (2) |
| C11—C10—C9 | 122.1 (2) | C1—N2—C8 | 115.0 (2) |
| C11—C10—H10 | 118.9 | N1—N2—C8 | 119.5 (2) |
| C9—C10—H10 | 118.9 | C12—O2—H2 | 109.5 |
| C10—C11—C12 | 119.8 (3) | C15—O3—C14 | 118.9 (2) |
| C10—C11—H11 | 120.1 | C17—O4—H4A | 109.5 |
| C12—C11—H11 | 120.1 | H1WA—O1W—H1WB | 112.6 |
| O2—C12—C13 | 123.0 (3) | ||
| O1—C1—C2—C3 | 4.5 (5) | C8—C9—C14—C13 | −177.9 (2) |
| N2—C1—C2—C3 | −176.3 (3) | C12—C13—C14—O3 | 179.6 (3) |
| O1—C1—C2—C7 | −175.8 (3) | C12—C13—C14—C9 | −0.2 (4) |
| N2—C1—C2—C7 | 3.3 (3) | O3—C15—C16—C17 | −179.8 (2) |
| C7—C2—C3—C4 | 0.6 (5) | C20—C15—C16—C17 | −0.2 (4) |
| C1—C2—C3—C4 | −179.8 (3) | C15—C16—C17—O4 | 179.6 (2) |
| C2—C3—C4—C5 | −0.2 (5) | C15—C16—C17—C18 | −0.1 (4) |
| C3—C4—C5—C6 | 0.1 (5) | O4—C17—C18—C19 | −179.3 (3) |
| C4—C5—C6—C7 | −0.6 (5) | C16—C17—C18—C19 | 0.4 (4) |
| C5—C6—C7—C2 | 1.0 (4) | C17—C18—C19—C20 | −0.5 (4) |
| C5—C6—C7—C8 | −178.8 (3) | C18—C19—C20—C15 | 0.2 (4) |
| C3—C2—C7—C6 | −1.1 (4) | C18—C19—C20—C8 | −174.9 (3) |
| C1—C2—C7—C6 | 179.2 (3) | O3—C15—C20—C19 | 179.7 (2) |
| C3—C2—C7—C8 | 178.8 (3) | C16—C15—C20—C19 | 0.1 (4) |
| C1—C2—C7—C8 | −0.9 (3) | O3—C15—C20—C8 | −5.2 (4) |
| C6—C7—C8—N2 | 178.2 (3) | C16—C15—C20—C8 | 175.3 (2) |
| C2—C7—C8—N2 | −1.7 (3) | N2—C8—C20—C19 | 69.3 (3) |
| C6—C7—C8—C20 | −65.4 (4) | C9—C8—C20—C19 | −169.3 (2) |
| C2—C7—C8—C20 | 114.7 (3) | C7—C8—C20—C19 | −40.6 (3) |
| C6—C7—C8—C9 | 62.1 (4) | N2—C8—C20—C15 | −105.5 (3) |
| C2—C7—C8—C9 | −117.8 (2) | C9—C8—C20—C15 | 15.8 (3) |
| N2—C8—C9—C14 | 106.9 (3) | C7—C8—C20—C15 | 144.5 (2) |
| C20—C8—C9—C14 | −14.5 (3) | O1—C1—N2—N1 | 5.6 (5) |
| C7—C8—C9—C14 | −143.5 (3) | C2—C1—N2—N1 | −173.6 (3) |
| N2—C8—C9—C10 | −70.9 (3) | O1—C1—N2—C8 | 174.5 (3) |
| C20—C8—C9—C10 | 167.7 (2) | C2—C1—N2—C8 | −4.7 (3) |
| C7—C8—C9—C10 | 38.7 (3) | C20—C8—N2—C1 | −115.3 (3) |
| C14—C9—C10—C11 | 0.0 (4) | C9—C8—N2—C1 | 122.7 (2) |
| C8—C9—C10—C11 | 178.0 (2) | C7—C8—N2—C1 | 4.0 (3) |
| C9—C10—C11—C12 | 0.1 (4) | C20—C8—N2—N1 | 54.2 (3) |
| C10—C11—C12—O2 | 178.5 (3) | C9—C8—N2—N1 | −67.8 (3) |
| C10—C11—C12—C13 | −0.2 (4) | C7—C8—N2—N1 | 173.5 (3) |
| O2—C12—C13—C14 | −178.3 (3) | C16—C15—O3—C14 | 170.9 (2) |
| C11—C12—C13—C14 | 0.3 (4) | C20—C15—O3—C14 | −8.7 (4) |
| C10—C9—C14—O3 | −179.7 (2) | C9—C14—O3—C15 | 10.1 (4) |
| C8—C9—C14—O3 | 2.3 (4) | C13—C14—O3—C15 | −169.6 (2) |
| C10—C9—C14—C13 | 0.0 (4) |
| H··· | ||||
| O4—H4A···O1Wi | 0.82 | 1.99 | 2.790 (3) | 165 |
| N1—H1B···O1ii | 0.89 (3) | 2.534 (16) | 3.025 (3) | 115.4 (19) |
| O2—H2···O1Wiii | 0.82 | 1.95 | 2.760 (3) | 170 |
| O1W—H1WA···N1 | 0.85 | 2.23 | 2.883 (3) | 134 |
| O1W—H1WB···O1ii | 0.87 | 2.06 | 2.861 (3) | 152 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O4—H4 | 0.82 | 1.99 | 2.790 (3) | 165 |
| N1—H1 | 0.89 (3) | 2.534 (16) | 3.025 (3) | 115.4 (19) |
| O2—H2⋯O1 | 0.82 | 1.95 | 2.760 (3) | 170 |
| O1 | 0.85 | 2.23 | 2.883 (3) | 134 |
| O1 | 0.87 | 2.06 | 2.861 (3) | 152 |
Symmetry codes: (i) ; (ii) ; (iii) .