Literature DB >> 21201387

Urea-N,N-dimethyl-acetamide (1/1).

Philippe Fernandes, Alastair J Florence, Francesca Fabbiani, William I F David, Kenneth Shankland.   

Abstract

Urea forms a 1:1 solvate with N,N-dimethyl-acetamide (DMA) [systematic name: diamino-methanal-N,N-dimethyl-acetamide (1/1), C(4)H(9)NO·CH(4)N(2)O] with both mol-ecules positioned on a twofold axis, giving rise to rotational disorder of the DMA mol-ecule. The mol-ecules display a layered structure in which urea mol-ecules form hydrogen-bonded ribbons bounded by mol-ecules of solvent.

Entities:  

Year:  2008        PMID: 21201387      PMCID: PMC2960435          DOI: 10.1107/S1600536807067232

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For details on experimental methods used to obtain this crystalline compound, see: Florence et al. (2003 ▶). For crystal structures of urea, see: Fernandes et al. (2007 ▶); Vaughan & Donohue (1952 ▶), and references therein; Swaminathan et al. (1984 ▶); Pryor & Sanger (1970 ▶); Guth et al. (1980 ▶); Weber et al. (2002 ▶). For related literature, see: Etter (1990 ▶).

Experimental

Crystal data

C4H9NO·CH4N2O M = 147.18 Monoclinic, a = 7.2770 (3) Å b = 17.5394 (9) Å c = 7.3789 (4) Å β = 119.450 (3)° V = 820.11 (7) Å3 Z = 4 Mo Kα radiation μ = 0.09 mm−1 T = 120 K 0.40 × 0.12 × 0.04 mm

Data collection

Bruker–Nonius KappaCCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2007 ▶) T min = 0.867, T max = 1 (expected range = 0.864–0.996) 5338 measured reflections 941 independent reflections 552 reflections with I > 2.0σ(I) R int = 0.048

Refinement

R[F 2 > 2σ(F 2)] = 0.050 wR(F 2) = 0.150 S = 0.89 939 reflections 63 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.31 e Å−3 Δρmin = −0.39 e Å−3 Data collection: COLLECT (Hooft, 1998 ▶); cell refinement: DENZO (Otwinowski & Minor, 1997 ▶) and COLLECT; data reduction: DENZO and COLLECT; program(s) used to solve structure: SIR92 (Altomare et al., 1994 ▶); program(s) used to refine structure: CRYSTALS (Betteridge et al., 2003 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶) and Mercury (Macrae et al., 2006 ▶); software used to prepare material for publication: enCIFer (Allen et al., 2004 ▶) and publCIF (Westrip, 2008 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536807067232/ga2020sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536807067232/ga2020Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C4H9NO·CH4N2OF000 = 320
Mr = 147.18Dx = 1.192 Mg m3
Monoclinic, C2/cMelting point: 406 K
Hall symbol: -C 2ycMo Kα radiation λ = 0.71073 Å
a = 7.2770 (3) ÅCell parameters from 2218 reflections
b = 17.5394 (9) Åθ = 3–27º
c = 7.3789 (4) ŵ = 0.09 mm1
β = 119.450 (3)ºT = 120 K
V = 820.11 (7) Å3Lath, colourless
Z = 40.40 × 0.12 × 0.04 mm
Bruker–Nonius KappaCCD diffractometer941 independent reflections
Radiation source: Bruker-Nonius FR591 rotating anode552 reflections with I > 2.0σ(I)
Monochromator: graphiteRint = 0.048
Detector resolution: 9.091 pixels mm-1θmax = 27.6º
T = 120(2) Kθmin = 3.4º
φ & ω scansh = −9→9
Absorption correction: multi-scan(SADABS; Bruker, 2007)k = −22→22
Tmin = 0.867, Tmax = 1l = −9→9
5338 measured reflections
Refinement on F2Hydrogen site location: geom + difmap
Least-squares matrix: fullH atoms treated by a mixture of independent and constrained refinement
R[F2 > 2σ(F2)] = 0.050  Method = Modified Sheldrick w = 1/[σ2(F2) + ( 0.07P)2] ,where P = (max(Fo2,0) + 2Fc2)/3
wR(F2) = 0.150(Δ/σ)max = 0.0001
S = 0.89Δρmax = 0.31 e Å3
939 reflectionsΔρmin = −0.39 e Å3
63 parametersExtinction correction: none
Primary atom site location: structure-invariant direct methods
xyzUiso*/UeqOcc. (<1)
C10.00000.30587 (14)0.25000.0293
O20.00000.23473 (9)0.25000.0380
N30.1649 (2)0.34642 (10)0.3935 (3)0.0360
N40.0668 (4)0.37977 (18)0.7962 (5)0.03470.5000
C60.2835 (3)0.40670 (13)0.9670 (4)0.0525
C70.00000.29897 (16)0.75000.0508
C8−0.0735 (5)0.4351 (2)0.6946 (6)0.03470.5000
O90.00000.50307 (11)0.75000.0628
H310.264 (3)0.3224 (11)0.499 (4)0.0365*
H320.158 (3)0.3959 (13)0.393 (3)0.0360*
H71−0.14090.29690.63800.0608*0.5000
H720.00740.27600.86960.0608*0.5000
H730.09080.27320.71240.0608*0.5000
H610.28800.46080.96650.0542*0.5000
H620.30560.38941.09800.0542*0.5000
H630.38890.38660.94090.0542*0.5000
H640.28270.35260.96570.0542*0.5000
H650.31080.42441.09940.0542*0.5000
H660.38850.42500.93770.0542*0.5000
U11U22U33U12U13U23
C10.0239 (11)0.0284 (14)0.0251 (13)0.00000.0038 (10)0.0000
O20.0315 (9)0.0245 (10)0.0342 (11)0.0000−0.0022 (8)0.0000
N30.0289 (8)0.0261 (9)0.0325 (10)−0.0009 (6)−0.0006 (7)0.0011 (7)
N40.0290 (18)0.0271 (17)0.038 (2)0.0003 (11)0.0085 (16)−0.0020 (14)
C60.0327 (10)0.0554 (14)0.0474 (14)−0.0003 (9)0.0026 (10)0.0046 (11)
C70.0663 (19)0.0236 (14)0.059 (2)0.00000.0286 (17)0.0000
C80.0332 (19)0.030 (2)0.031 (2)−0.0004 (14)0.0084 (16)0.0008 (16)
O90.0855 (16)0.0210 (11)0.0587 (16)0.00000.0176 (13)0.0000
O9—C81.288 (4)C6—H630.9500
O9—C8i1.288 (4)C6—H640.9500
O2—C11.248 (3)C6—H650.9500
N4—C61.531 (4)C6—H610.9500
N4—C81.339 (5)C6—H660.9500
N4—C71.483 (4)C7—H72i0.9500
N3—C11.348 (2)C7—H73i0.9500
N3—H320.87 (2)C7—H71i0.9500
N3—H310.87 (2)C7—H710.9500
C6—C8i1.488 (5)C7—H720.9500
C6—H620.9500C7—H730.9500
C6—N4—C7124.9 (2)C8i—C6—H6172.00
C6—N4—C8115.5 (3)H62—C6—H63110.00
C7—N4—C8119.4 (3)H62—C6—H6472.00
C1—N3—H32119.8 (14)C8i—C6—H66109.00
H31—N3—H32120.7 (19)N4—C7—H71i75.00
C1—N3—H31118.4 (14)N4—C7—H72i119.00
N4—C8—C6i114.0 (3)N4—C7—H73109.00
O9—C8—N4114.2 (3)H71—C7—H72110.00
O9—C8—C6i131.8 (3)H71—C7—H73110.00
N4—C6—H61109.00N4—C7—H73i126.00
N4—C6—H62109.00H71—C7—H71i176.00
N4—C6—H63109.00H71—C7—H72i68.00
N4—C6—H6472.00H71—C7—H73i68.00
H61—C6—H63110.00H72—C7—H73110.00
H61—C6—H64178.00N4i—C7—H72119.00
H61—C6—H6572.00H71i—C7—H7268.00
H61—C6—H6668.00N4i—C7—H7175.00
N4—C6—H65124.00N4i—C7—H73126.00
N4—C6—H66122.00H71i—C7—H7368.00
H61—C6—H62110.00N4i—C7—H71i109.00
H62—C6—H66126.00N4i—C7—H72i109.00
C8i—C6—H62121.00N4i—C7—H73i109.00
H63—C6—H6468.00H71i—C7—H72i110.00
H63—C6—H65123.00H71i—C7—H73i110.00
C8i—C6—H63125.00N4—C7—H71109.00
H64—C6—H65110.00N4—C7—H72109.00
H64—C6—H66110.00O2—C1—N3121.84 (12)
C8i—C6—H64109.00O2—C1—N3ii121.84 (12)
H65—C6—H66110.00N3—C1—N3ii116.3 (2)
C8i—C6—H65109.00
D—H···AD—HH···AD···AD—H···A
N3—H31···O2iii0.87 (2)2.06 (2)2.930 (2)180 (3)
N3—H32···O9iv0.87 (2)2.09 (2)2.878 (3)149.7 (19)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N3—H31⋯O2i0.87 (2)2.06 (2)2.930 (2)180 (3)
N3—H32⋯O9ii0.87 (2)2.09 (2)2.878 (3)149.7 (19)

Symmetry codes: (i) ; (ii) .

  1 in total

1.  Indexing powder patterns in physical form screening: instrumentation and data quality.

Authors:  Alastair J Florence; Bruno Baumgartner; Chris Weston; Norman Shankland; Alan R Kennedy; Kenneth Shankland; William I F David
Journal:  J Pharm Sci       Date:  2003-09       Impact factor: 3.534

  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.