Literature DB >> 21201351

Acetato(1,10-phenanthroline-5,6-dione)silver(I) trihydrate.

Jonathan Onuegbu1, Ray J Butcher, Charles Hosten, Uche Charles Udeochu, Oladapo Bakare.   

Abstract

In the structure of the title compound, [Ag(C(2)H(3)O(2))(C(12)H(6)N(2)O(2))]·3H(2)O, the Ag(I) atom is coordinated by both 1,10-phenanthroline-5,6-dione N atoms and one O atom from the acetate anion. The three water mol-ecules are involved in extensive hydrogen bonding to each other and to the acetate O and 1,10-phenanthroline-5,6-dione O atoms. In addition, there are weak C-H⋯O inter-actions.

Entities:  

Year:  2008        PMID: 21201351      PMCID: PMC2960336          DOI: 10.1107/S1600536808000846

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related literature, see: Allen (2002 ▶); Armaroli (2001 ▶); Burrows et al. (1995 ▶); Calderazzo et al. (1999 ▶, 2002 ▶); Calucci et al. (2006 ▶); Fox et al. (1991 ▶); Galet et al. (2005 ▶); Hilt et al. (1997 ▶); Lei et al. (1996 ▶); Leschke et al. (2002 ▶); Ma et al. (2002 ▶); Okamura et al. (2006 ▶); Onuegbu et al. (2007 ▶); Pallenberg et al. (1997 ▶); Paramonov et al. (2003 ▶); Paw & Eisenberg (1997 ▶); Ruiz et al. (1999 ▶); Scaltrito et al. (2000 ▶); Shavaleev et al. (2003a ▶, 2003b ▶); Titze et al. (1997 ▶); Uche et al. (2007 ▶); Whitesides et al. (1991 ▶).

Experimental

Crystal data

[Ag(C2H3O2)(C12H6N2O2)]·3H2O M = 431.15 Triclinic, a = 6.6851 (11) Å b = 9.6407 (17) Å c = 12.818 (2) Å α = 96.200 (2)° β = 103.490 (2)° γ = 104.629 (2)° V = 765.0 (2) Å3 Z = 2 Mo Kα radiation μ = 1.36 mm−1 T = 103 (2) K 0.58 × 0.20 × 0.15 mm

Data collection

Bruker SMART 1000 CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.505, T max = 0.821 8724 measured reflections 4315 independent reflections 4105 reflections with I > 2σ(I) R int = 0.020

Refinement

R[F 2 > 2σ(F 2)] = 0.028 wR(F 2) = 0.068 S = 1.07 4315 reflections 243 parameters 6 restraints H atoms treated by a mixture of independent and constrained refinement Δρmax = 1.28 e Å−3 Δρmin = −1.03 e Å−3 Data collection: SMART (Bruker, 2003 ▶); cell refinement: SAINT (Bruker, 2003 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536808000846/ci2544sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808000846/ci2544Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Ag(C2H3O2)(C12H6N2O2)]·3H2OZ = 2
Mr = 431.15F000 = 432
Triclinic, P1Dx = 1.872 Mg m3
Hall symbol: -P 1Mo Kα radiation λ = 0.71073 Å
a = 6.6851 (11) ÅCell parameters from 6131 reflections
b = 9.6407 (17) Åθ = 2.0–30.6º
c = 12.818 (2) ŵ = 1.36 mm1
α = 96.200 (2)ºT = 103 (2) K
β = 103.490 (2)ºNeedle, colorless
γ = 104.629 (2)º0.58 × 0.20 × 0.15 mm
V = 765.0 (2) Å3
Bruker SMART 1000 CCD area-detector diffractometer4315 independent reflections
Radiation source: fine-focus sealed tube4105 reflections with I > 2σ(I)
Monochromator: graphiteRint = 0.020
T = 103(2) Kθmax = 30.7º
φ and ω scansθmin = 2.5º
Absorption correction: multi-scan(SADABS; Sheldrick, 1996)h = −9→9
Tmin = 0.505, Tmax = 0.821k = −13→12
8724 measured reflectionsl = −18→18
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.028H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.068  w = 1/[σ2(Fo2) + (0.0247P)2 + 0.7651P] where P = (Fo2 + 2Fc2)/3
S = 1.07(Δ/σ)max = 0.007
4315 reflectionsΔρmax = 1.28 e Å3
243 parametersΔρmin = −1.03 e Å3
6 restraintsExtinction correction: SHELXL97 (Sheldrick, 1997), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.026 (2)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Ag0.26396 (2)0.328765 (18)0.530264 (13)0.02701 (7)
O10.2255 (3)0.94093 (16)0.31707 (14)0.0314 (3)
O20.1697 (3)0.73936 (18)0.13835 (13)0.0291 (3)
O1A0.3458 (2)0.19712 (16)0.65468 (11)0.0237 (3)
O2A0.2011 (2)0.34851 (16)0.73262 (11)0.0226 (3)
N10.2608 (3)0.57669 (19)0.53824 (13)0.0212 (3)
N20.2125 (3)0.37873 (18)0.35977 (13)0.0196 (3)
C10.2860 (3)0.6716 (3)0.62821 (16)0.0271 (4)
H1A0.29930.63810.69580.033*
C20.2936 (4)0.8165 (3)0.62682 (18)0.0304 (5)
H2A0.31280.88090.69230.036*
C30.2725 (3)0.8656 (2)0.52843 (18)0.0267 (4)
H3A0.27670.96420.52510.032*
C40.2451 (3)0.7677 (2)0.43425 (15)0.0193 (3)
C50.2224 (3)0.8171 (2)0.32790 (17)0.0212 (4)
C60.1923 (3)0.7039 (2)0.22726 (16)0.0196 (3)
C70.1930 (3)0.5547 (2)0.24261 (14)0.0168 (3)
C80.1725 (3)0.4507 (2)0.15281 (16)0.0229 (4)
H8A0.15910.47550.08230.028*
C90.1722 (3)0.3120 (2)0.16871 (17)0.0265 (4)
H9A0.15930.23940.10930.032*
C100.1909 (3)0.2797 (2)0.27241 (17)0.0242 (4)
H10A0.18840.18310.28240.029*
C110.2144 (3)0.51492 (19)0.34543 (14)0.0154 (3)
C120.2408 (3)0.6235 (2)0.44269 (14)0.0166 (3)
C1A0.2816 (3)0.2439 (2)0.73360 (15)0.0187 (3)
C2A0.3012 (4)0.1690 (3)0.83090 (17)0.0290 (4)
H2AA0.15790.11410.83340.043*
H2AB0.37010.24190.89760.043*
H2AC0.38830.10200.82510.043*
O1W0.2028 (3)0.98250 (18)0.03879 (14)0.0279 (3)
H1W10.190 (5)0.927 (3)0.081 (2)0.045 (9)*
H1W20.111 (9)1.023 (8)0.026 (7)0.18 (3)*
O2W0.3820 (3)0.8231 (2)0.89715 (14)0.0336 (4)
H2W10.315 (6)0.858 (4)0.931 (3)0.072 (13)*
H2W20.505 (4)0.874 (5)0.910 (4)0.097 (17)*
O3W0.3387 (3)0.5397 (2)0.93172 (14)0.0354 (4)
H3W10.296 (6)0.483 (3)0.874 (2)0.053 (10)*
H3W20.359 (9)0.627 (3)0.927 (5)0.12 (2)*
U11U22U33U12U13U23
Ag0.02657 (10)0.03085 (11)0.02929 (10)0.01137 (7)0.00869 (6)0.01938 (7)
O10.0345 (8)0.0148 (7)0.0441 (9)0.0076 (6)0.0070 (7)0.0094 (6)
O20.0393 (8)0.0280 (8)0.0268 (7)0.0127 (7)0.0137 (6)0.0158 (6)
O1A0.0339 (8)0.0221 (7)0.0216 (6)0.0145 (6)0.0113 (6)0.0081 (5)
O2A0.0278 (7)0.0211 (7)0.0230 (6)0.0120 (6)0.0078 (5)0.0071 (5)
N10.0188 (7)0.0254 (8)0.0194 (7)0.0053 (6)0.0055 (6)0.0056 (6)
N20.0197 (7)0.0153 (7)0.0238 (7)0.0055 (6)0.0047 (6)0.0061 (6)
C10.0220 (9)0.0387 (12)0.0190 (8)0.0060 (8)0.0065 (7)0.0020 (8)
C20.0280 (10)0.0340 (12)0.0245 (9)0.0050 (9)0.0077 (8)−0.0069 (8)
C30.0261 (10)0.0194 (9)0.0318 (10)0.0047 (8)0.0076 (8)−0.0026 (8)
C40.0180 (8)0.0162 (8)0.0225 (8)0.0039 (6)0.0048 (6)0.0026 (7)
C50.0192 (8)0.0151 (8)0.0290 (9)0.0043 (7)0.0058 (7)0.0061 (7)
C60.0201 (8)0.0170 (8)0.0247 (8)0.0061 (7)0.0083 (7)0.0094 (7)
C70.0178 (8)0.0149 (8)0.0187 (8)0.0049 (6)0.0054 (6)0.0050 (6)
C80.0242 (9)0.0249 (10)0.0199 (8)0.0077 (7)0.0062 (7)0.0027 (7)
C90.0294 (10)0.0214 (9)0.0266 (9)0.0079 (8)0.0058 (8)−0.0025 (7)
C100.0252 (9)0.0143 (8)0.0323 (10)0.0064 (7)0.0054 (8)0.0035 (7)
C110.0141 (7)0.0138 (8)0.0181 (7)0.0036 (6)0.0041 (6)0.0044 (6)
C120.0127 (7)0.0171 (8)0.0191 (8)0.0030 (6)0.0038 (6)0.0041 (6)
C1A0.0190 (8)0.0174 (8)0.0189 (8)0.0038 (6)0.0043 (6)0.0044 (6)
C2A0.0376 (11)0.0334 (11)0.0232 (9)0.0173 (9)0.0103 (8)0.0142 (8)
O1W0.0313 (8)0.0228 (7)0.0339 (8)0.0100 (6)0.0103 (6)0.0146 (6)
O2W0.0390 (9)0.0294 (9)0.0304 (8)0.0073 (7)0.0084 (7)0.0045 (7)
O3W0.0431 (10)0.0308 (9)0.0279 (8)0.0114 (8)0.0049 (7)−0.0039 (7)
Ag—O1A2.1987 (14)C6—C71.474 (3)
Ag—N22.2554 (17)C7—C111.398 (2)
Ag—N12.3870 (18)C7—C81.399 (3)
O1—C51.212 (2)C8—C91.373 (3)
O2—C61.212 (2)C8—H8A0.95
O1A—C1A1.270 (2)C9—C101.383 (3)
O2A—C1A1.257 (2)C9—H9A0.95
N1—C121.340 (2)C10—H10A0.95
N1—C11.341 (3)C11—C121.484 (2)
N2—C111.343 (2)C1A—C2A1.504 (3)
N2—C101.346 (3)C2A—H2AA0.98
C1—C21.387 (3)C2A—H2AB0.98
C1—H1A0.95C2A—H2AC0.98
C2—C31.384 (3)O1W—H1W10.80 (2)
C2—H2A0.95O1W—H1W20.81 (2)
C3—C41.395 (3)O2W—H2W10.79 (2)
C3—H3A0.95O2W—H2W20.81 (2)
C4—C121.399 (3)O3W—H3W10.82 (2)
C4—C51.479 (3)O3W—H3W20.82 (2)
C5—C61.536 (3)
O1A—Ag—N2153.49 (6)C11—C7—C6121.26 (16)
O1A—Ag—N1133.64 (6)C8—C7—C6119.55 (17)
N2—Ag—N171.57 (6)C9—C8—C7118.65 (18)
C1A—O1A—Ag104.47 (12)C9—C8—H8A120.7
C12—N1—C1118.63 (18)C7—C8—H8A120.7
C12—N1—Ag114.93 (12)C8—C9—C10119.10 (18)
C1—N1—Ag126.37 (15)C8—C9—H9A120.5
C11—N2—C10118.50 (17)C10—C9—H9A120.5
C11—N2—Ag118.68 (12)N2—C10—C9122.98 (19)
C10—N2—Ag122.73 (13)N2—C10—H10A118.5
N1—C1—C2122.9 (2)C9—C10—H10A118.5
N1—C1—H1A118.6N2—C11—C7121.57 (16)
C2—C1—H1A118.6N2—C11—C12117.94 (16)
C3—C2—C1118.84 (19)C7—C11—C12120.49 (16)
C3—C2—H2A120.6N1—C12—C4122.01 (17)
C1—C2—H2A120.6N1—C12—C11116.75 (17)
C2—C3—C4118.8 (2)C4—C12—C11121.23 (16)
C2—C3—H3A120.6O2A—C1A—O1A122.59 (17)
C4—C3—H3A120.6O2A—C1A—C2A119.33 (17)
C3—C4—C12118.85 (18)O1A—C1A—C2A118.08 (17)
C3—C4—C5120.01 (18)C1A—C2A—H2AA109.5
C12—C4—C5121.14 (17)C1A—C2A—H2AB109.5
O1—C5—C4123.23 (19)H2AA—C2A—H2AB109.5
O1—C5—C6119.30 (18)C1A—C2A—H2AC109.5
C4—C5—C6117.47 (16)H2AA—C2A—H2AC109.5
O2—C6—C7122.05 (18)H2AB—C2A—H2AC109.5
O2—C6—C5119.57 (18)H1W1—O1W—H1W2115 (6)
C7—C6—C5118.39 (16)H2W1—O2W—H2W2112 (5)
C11—C7—C8119.19 (17)H3W1—O3W—H3W2115 (5)
N2—Ag—O1A—C1A−165.35 (13)C11—C7—C8—C90.6 (3)
N1—Ag—O1A—C1A35.72 (16)C6—C7—C8—C9−179.60 (18)
O1A—Ag—N1—C12167.44 (11)C7—C8—C9—C100.3 (3)
N2—Ag—N1—C12−2.82 (12)C11—N2—C10—C90.5 (3)
O1A—Ag—N1—C1−9.46 (19)Ag—N2—C10—C9−176.01 (15)
N2—Ag—N1—C1−179.72 (17)C8—C9—C10—N2−0.9 (3)
O1A—Ag—N2—C11−161.23 (13)C10—N2—C11—C70.5 (3)
N1—Ag—N2—C112.85 (13)Ag—N2—C11—C7177.12 (13)
O1A—Ag—N2—C1015.3 (2)C10—N2—C11—C12−179.30 (16)
N1—Ag—N2—C10179.36 (17)Ag—N2—C11—C12−2.6 (2)
C12—N1—C1—C2−0.3 (3)C8—C7—C11—N2−1.0 (3)
Ag—N1—C1—C2176.46 (15)C6—C7—C11—N2179.17 (16)
N1—C1—C2—C30.5 (3)C8—C7—C11—C12178.76 (16)
C1—C2—C3—C4−0.2 (3)C6—C7—C11—C12−1.1 (3)
C2—C3—C4—C12−0.3 (3)C1—N1—C12—C4−0.2 (3)
C2—C3—C4—C5−179.94 (19)Ag—N1—C12—C4−177.32 (13)
C3—C4—C5—O1−0.3 (3)C1—N1—C12—C11179.68 (16)
C12—C4—C5—O1−179.91 (19)Ag—N1—C12—C112.52 (19)
C3—C4—C5—C6−179.92 (17)C3—C4—C12—N10.5 (3)
C12—C4—C5—C60.4 (3)C5—C4—C12—N1−179.88 (17)
O1—C5—C6—O2−0.8 (3)C3—C4—C12—C11−179.36 (17)
C4—C5—C6—O2178.84 (18)C5—C4—C12—C110.3 (3)
O1—C5—C6—C7178.90 (18)N2—C11—C12—N1−0.1 (2)
C4—C5—C6—C7−1.4 (2)C7—C11—C12—N1−179.85 (16)
O2—C6—C7—C11−178.52 (18)N2—C11—C12—C4179.77 (16)
C5—C6—C7—C111.8 (3)C7—C11—C12—C40.0 (3)
O2—C6—C7—C81.7 (3)Ag—O1A—C1A—O2A−3.1 (2)
C5—C6—C7—C8−178.06 (17)Ag—O1A—C1A—C2A176.13 (15)
D—H···AD—HH···AD···AD—H···A
O1W—H1W1···O20.80 (2)2.01 (2)2.773 (2)158 (3)
O1W—H1W2···O1Wi0.81 (2)2.05 (4)2.781 (3)151 (7)
O2W—H2W1···O1Wii0.79 (2)2.12 (2)2.904 (2)168 (4)
O2W—H2W2···O1Wiii0.81 (2)2.00 (2)2.805 (3)170 (5)
O3W—H3W1···O2A0.82 (2)1.97 (2)2.791 (2)178 (4)
O3W—H3W2···O2W0.82 (2)1.95 (2)2.769 (3)172 (6)
C3—H3A···O1Aiv0.952.523.286 (3)138
C8—H8A···O3Wv0.952.553.393 (3)148
C10—H10A···O1vi0.952.483.431 (3)174
Ag—O1A2.1987 (14)
Ag—N22.2554 (17)
Ag—N12.3870 (18)
O1A—Ag—N2153.49 (6)
O1A—Ag—N1133.64 (6)
N2—Ag—N171.57 (6)
Table 2

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O1W—H1W1⋯O20.80 (2)2.01 (2)2.773 (2)158 (3)
O1W—H1W2⋯O1Wi0.81 (2)2.05 (4)2.781 (3)151 (7)
O2W—H2W1⋯O1Wii0.79 (2)2.12 (2)2.904 (2)168 (4)
O2W—H2W2⋯O1Wiii0.81 (2)2.00 (2)2.805 (3)170 (5)
O3W—H3W1⋯O2A0.82 (2)1.97 (2)2.791 (2)178 (4)
O3W—H3W2⋯O2W0.82 (2)1.95 (2)2.769 (3)172 (6)
C3—H3A⋯O1Aiv0.952.523.286 (3)138
C8—H8A⋯O3Wv0.952.553.393 (3)148
C10—H10A⋯O1vi0.952.483.431 (3)174

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) ; (vi) .

  7 in total

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Authors:  Frank H Allen
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Authors:  Nail M Shavaleev; Lucy P Moorcraft; Simon J A Pope; Zöe R Bell; Stephen Faulkner; Michael D Ward
Journal:  Chemistry       Date:  2003-11-07       Impact factor: 5.236

3.  Synthesis, Characterization, and Spectroscopy of Dipyridocatecholate Complexes of Platinum.

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4.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

Review 5.  Molecular self-assembly and nanochemistry: a chemical strategy for the synthesis of nanostructures.

Authors:  G M Whitesides; J P Mathias; C T Seto
Journal:  Science       Date:  1991-11-29       Impact factor: 47.728

6.  Sensitised near-infrared emission from lanthanides using a covalently-attached Pt(II) fragment as an antenna group.

Authors:  Nail M Shavaleev; Lucy P Moorcraft; Simon J A Pope; Zöe R Bell; Stephen Faulkner; Michael D Ward
Journal:  Chem Commun (Camb)       Date:  2003-05-21       Impact factor: 6.222

7.  Vibrational assignment of the Raman active modes of 1,10-phenanthroline-5,6-dione using DFT calculations.

Authors:  Uche Udeochu; Toiya Jimerson; Alberto Vivoni; Oladapo Bakare; Charles M Hosten
Journal:  J Phys Chem A       Date:  2007-04-10       Impact factor: 2.781

  7 in total

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