Literature DB >> 21201314

Diaqua-bis(5-phenyl-1H-pyrazole-3-carboxyl-ato)copper(II).

Yuan-Hui Wu, Tian-Mo Liu, Su-Xing Luo.   

Abstract

In the centrosymmetric title compound, [Cu(C(10)H(7)N(2)O(2))(2)(H(2)O)(2)], the Cu(II) ion occupies an inversion centre and exhibits a distorted octa-hedral geometry. The phenyl and pyrazole rings of the ligand are twisted by an angle of 11.36 (8)°. In the crystal structure, mol-ecules are linked into a two-dimensional network parallel to the (010) plane by O-H⋯O and N-H⋯O hydrogen bonds.

Entities:  

Year:  2008        PMID: 21201314      PMCID: PMC2960242          DOI: 10.1107/S1600536808000810

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For ligand preparation, see: Crane et al. (1999 ▶); Gharbaoui et al. (2007 ▶). For general background, see: van Herk et al. (2003 ▶); Knopp (1999 ▶).

Experimental

Crystal data

[Cu(C10H7N2O2)2(H2O)2] M = 473.92 Monoclinic, a = 5.0443 (6) Å b = 32.161 (4) Å c = 6.3234 (8) Å β = 106.293 (1)° V = 984.6 (2) Å3 Z = 2 Mo Kα radiation μ = 1.16 mm−1 T = 292 (2) K 0.35 × 0.25 × 0.17 mm

Data collection

Bruker SMART CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.690, T max = 0.829 8611 measured reflections 2254 independent reflections 1907 reflections with I > 2σ(I) R int = 0.027

Refinement

R[F 2 > 2σ(F 2)] = 0.037 wR(F 2) = 0.084 S = 1.08 2254 reflections 150 parameters 3 restraints H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.34 e Å−3 Δρmin = −0.32 e Å−3 Data collection: SMART (Bruker, 1997 ▶); cell refinement: SAINT (Bruker, 1997 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536808000810/ci2551sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808000810/ci2551Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Cu(C10H7N2O2)2(H2O)2]F000 = 486
Mr = 473.92Dx = 1.599 Mg m3
Monoclinic, P21/nMo Kα radiation λ = 0.71073 Å
Hall symbol: -P 2ynCell parameters from 2772 reflections
a = 5.0443 (6) Åθ = 2.5–26.6º
b = 32.161 (4) ŵ = 1.16 mm1
c = 6.3234 (8) ÅT = 292 (2) K
β = 106.293 (1)ºBlock, blue
V = 984.6 (2) Å30.35 × 0.25 × 0.17 mm
Z = 2
Bruker SMART CCD area-detector diffractometer2254 independent reflections
Radiation source: fine-focus sealed tube1907 reflections with I > 2σ(I)
Monochromator: graphiteRint = 0.027
T = 292(2) Kθmax = 27.5º
φ and ω scansθmin = 2.5º
Absorption correction: multi-scan(SADABS; Sheldrick, 1996)h = −6→6
Tmin = 0.690, Tmax = 0.829k = −41→39
8611 measured reflectionsl = −8→8
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.037H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.084  w = 1/[σ2(Fo2) + (0.0302P)2 + 0.72P] where P = (Fo2 + 2Fc2)/3
S = 1.08(Δ/σ)max = 0.001
2254 reflectionsΔρmax = 0.34 e Å3
150 parametersΔρmin = −0.32 e Å3
3 restraintsExtinction correction: none
Primary atom site location: structure-invariant direct methods
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cu10.50000.00000.00000.03166 (13)
O10.3462 (3)0.01796 (5)0.2440 (2)0.0325 (3)
O20.3301 (4)0.07235 (5)0.4604 (3)0.0404 (4)
O30.0850 (4)0.03336 (6)−0.2706 (3)0.0380 (4)
N10.6670 (4)0.05536 (5)0.0513 (3)0.0294 (4)
N20.8212 (4)0.08034 (5)−0.0348 (3)0.0301 (4)
H20.89560.0730−0.13590.036*
C10.4084 (4)0.05525 (7)0.3144 (3)0.0288 (5)
C20.5895 (4)0.07783 (7)0.2015 (3)0.0277 (4)
C30.6964 (4)0.11779 (7)0.2111 (4)0.0302 (5)
H30.67320.13950.30170.036*
C40.8454 (4)0.11852 (6)0.0569 (4)0.0282 (4)
C51.0091 (5)0.15138 (7)−0.0085 (4)0.0328 (5)
C61.0740 (6)0.18727 (8)0.1155 (5)0.0473 (6)
H61.00670.19110.23680.057*
C71.2389 (7)0.21770 (9)0.0605 (6)0.0641 (9)
H71.28210.24170.14540.077*
C81.3376 (6)0.21240 (9)−0.1183 (6)0.0642 (9)
H81.44820.2328−0.15430.077*
C91.2744 (6)0.17720 (10)−0.2448 (5)0.0565 (8)
H91.34190.1738−0.36630.068*
C101.1097 (5)0.14664 (8)−0.1918 (4)0.0438 (6)
H101.06620.1229−0.27860.053*
H1W0.138 (6)0.0417 (9)−0.376 (4)0.069 (10)*
H2W−0.041 (5)0.0163 (8)−0.312 (5)0.075 (11)*
U11U22U33U12U13U23
Cu10.0386 (2)0.0297 (2)0.0341 (2)−0.00911 (17)0.02227 (17)−0.00583 (17)
O10.0365 (9)0.0338 (8)0.0339 (8)−0.0071 (7)0.0207 (7)−0.0019 (7)
O20.0523 (11)0.0407 (9)0.0388 (9)−0.0031 (8)0.0301 (8)−0.0036 (7)
O30.0416 (10)0.0443 (10)0.0361 (9)−0.0093 (8)0.0239 (8)−0.0051 (8)
N10.0332 (10)0.0304 (10)0.0301 (9)−0.0060 (7)0.0177 (8)−0.0028 (7)
N20.0334 (10)0.0325 (10)0.0311 (10)−0.0064 (8)0.0203 (8)−0.0029 (8)
C10.0276 (11)0.0349 (12)0.0264 (11)0.0006 (9)0.0115 (9)0.0032 (9)
C20.0286 (11)0.0311 (11)0.0260 (10)0.0004 (8)0.0119 (9)−0.0003 (8)
C30.0315 (11)0.0298 (11)0.0320 (12)0.0002 (9)0.0133 (9)−0.0033 (9)
C40.0282 (10)0.0277 (11)0.0296 (11)0.0005 (8)0.0094 (9)0.0016 (9)
C50.0285 (11)0.0303 (11)0.0402 (12)0.0008 (9)0.0108 (9)0.0071 (10)
C60.0478 (15)0.0366 (14)0.0641 (18)−0.0063 (11)0.0264 (13)−0.0051 (12)
C70.0610 (19)0.0357 (15)0.104 (3)−0.0135 (13)0.0363 (19)−0.0046 (15)
C80.0521 (18)0.0476 (17)0.101 (3)−0.0060 (14)0.0345 (18)0.0248 (17)
C90.0530 (17)0.0655 (19)0.0588 (18)−0.0018 (14)0.0287 (14)0.0232 (15)
C100.0481 (15)0.0462 (15)0.0411 (14)−0.0060 (11)0.0189 (12)0.0055 (11)
Cu1—N11.9572 (17)C3—C41.388 (3)
Cu1—N1i1.9573 (17)C3—H30.93
Cu1—O1i1.9968 (14)C4—C51.470 (3)
Cu1—O11.9968 (14)C5—C61.382 (3)
Cu1—O32.5400 (19)C5—C101.398 (3)
O1—C11.287 (3)C6—C71.390 (4)
O2—C11.231 (3)C6—H60.93
O3—H1W0.827 (10)C7—C81.368 (5)
O3—H2W0.825 (10)C7—H70.93
N1—C21.336 (3)C8—C91.371 (5)
N1—N21.336 (2)C8—H80.93
N2—C41.349 (3)C9—C101.387 (3)
N2—H20.86C9—H90.93
C1—C21.496 (3)C10—H100.93
C2—C31.388 (3)
N1—Cu1—N1i180C3—C2—C1135.23 (19)
N1—Cu1—O1i98.56 (6)C4—C3—C2105.36 (19)
N1i—Cu1—O1i81.44 (6)C4—C3—H3127.3
N1—Cu1—O181.44 (6)C2—C3—H3127.3
N1i—Cu1—O198.56 (6)N2—C4—C3106.56 (18)
O1i—Cu1—O1180N2—C4—C5121.60 (19)
N1—Cu1—O387.85 (7)C3—C4—C5131.8 (2)
N1i—Cu1—O392.15 (7)C6—C5—C10118.6 (2)
O1i—Cu1—O391.56 (6)C6—C5—C4120.2 (2)
O1—Cu1—O388.44 (6)C10—C5—C4121.2 (2)
C1—O1—Cu1115.29 (13)C5—C6—C7120.6 (3)
Cu1—O3—H1W107 (2)C5—C6—H6119.7
Cu1—O3—H2W110 (2)C7—C6—H6119.7
H1W—O3—H2W111 (2)C8—C7—C6120.1 (3)
C2—N1—N2106.51 (17)C8—C7—H7120.0
C2—N1—Cu1114.33 (14)C6—C7—H7120.0
N2—N1—Cu1138.77 (14)C7—C8—C9120.4 (3)
N1—N2—C4111.41 (17)C7—C8—H8119.8
N1—N2—H2124.3C9—C8—H8119.8
C4—N2—H2124.3C8—C9—C10120.1 (3)
O2—C1—O1125.27 (19)C8—C9—H9120.0
O2—C1—C2120.58 (19)C10—C9—H9120.0
O1—C1—C2114.14 (18)C9—C10—C5120.3 (3)
N1—C2—C3110.16 (18)C9—C10—H10119.9
N1—C2—C1114.60 (18)C5—C10—H10119.9
N1—Cu1—O1—C12.75 (15)O1—C1—C2—C3176.1 (2)
N1i—Cu1—O1—C1−177.25 (15)N1—C2—C3—C40.0 (2)
O3—Cu1—O1—C1−85.31 (15)C1—C2—C3—C4−178.6 (2)
O1i—Cu1—N1—C2175.94 (15)N1—N2—C4—C3−0.1 (2)
O1—Cu1—N1—C2−4.06 (15)N1—N2—C4—C5179.06 (19)
O3—Cu1—N1—C284.69 (16)C2—C3—C4—N20.1 (2)
O1i—Cu1—N1—N24.4 (2)C2—C3—C4—C5−179.0 (2)
O1—Cu1—N1—N2−175.6 (2)N2—C4—C5—C6−167.6 (2)
O3—Cu1—N1—N2−86.8 (2)C3—C4—C5—C611.3 (4)
C2—N1—N2—C40.1 (2)N2—C4—C5—C1010.3 (3)
Cu1—N1—N2—C4172.02 (17)C3—C4—C5—C10−170.8 (2)
Cu1—O1—C1—O2178.61 (18)C10—C5—C6—C7−0.8 (4)
Cu1—O1—C1—C2−1.0 (2)C4—C5—C6—C7177.2 (3)
N2—N1—C2—C30.0 (2)C5—C6—C7—C80.3 (5)
Cu1—N1—C2—C3−174.22 (15)C6—C7—C8—C90.2 (5)
N2—N1—C2—C1178.84 (17)C7—C8—C9—C10−0.1 (5)
Cu1—N1—C2—C14.7 (2)C8—C9—C10—C5−0.5 (4)
O2—C1—C2—N1178.0 (2)C6—C5—C10—C90.9 (4)
O1—C1—C2—N1−2.4 (3)C4—C5—C10—C9−177.1 (2)
O2—C1—C2—C3−3.5 (4)
D—H···AD—HH···AD···AD—H···A
O3—H1W···O2ii0.83 (3)1.88 (3)2.679 (3)161 (3)
N2—H2···O3iii0.861.932.719 (3)152
O3—H2W···O1iv0.83 (3)2.04 (3)2.773 (3)149 (3)
Cu1—N11.9572 (17)
Cu1—O11.9968 (14)
Cu1—O32.5400 (19)
N1—Cu1—N1i180
N1—Cu1—O1i98.56 (6)
N1—Cu1—O181.44 (6)
O1i—Cu1—O1180
N1—Cu1—O387.85 (7)
N1i—Cu1—O392.15 (7)
O1i—Cu1—O391.56 (6)
O1—Cu1—O388.44 (6)

Symmetry code: (i) .

Table 2

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O3—H1W⋯O2ii0.83 (3)1.88 (3)2.679 (3)161 (3)
N2—H2⋯O3iii0.861.932.719 (3)152
O3—H2W⋯O1iv0.83 (3)2.04 (3)2.773 (3)149 (3)

Symmetry codes: (ii) ; (iii) ; (iv) .

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