Literature DB >> 21201304

Di-μ-chlorido-bis-{[2-(2-pyridylmethyl-amino)ethanesulfonato-κN,N',O]copper(II)}.

Zhong-Xiang Du1, Jian-Hua Qin, Jian-Ge Wang.   

Abstract

In the title compound, [Cu(2)(C(8)H(11)N(2)O(3)S)(2)Cl(2)], the Cu atoms are five-coordinated in a distorted square-pyramidal geometry by three donor atoms of the deprotonated anionic 2-(2-pyridylmethyl-amino)ethanesulfonate (pmt) ligand and two Cl atoms. The Cl atoms bridge two Cu atoms, giving a binuclear structure; the centroid of the Cu(2)Cl(2) ring lies on a crystallographic center of inversion. The complex is stabilized by hydrogen bonds and π-π stacking inter-actions [average inter-planar distance = 3.4969 (1) Å and ring-centroid separation distance = 4.1068 (4) Å].

Entities:  

Year:  2008        PMID: 21201304      PMCID: PMC2960365          DOI: 10.1107/S1600536808000779

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related literature, see: Li et al. (2006 ▶, 2007a ▶,b ▶).

Experimental

Crystal data

[Cu2(C8H11N2O3S)2Cl2] M = 628.48 Triclinic, a = 8.294 (1) Å b = 8.362 (1) Å c = 9.110 (1) Å α = 103.773 (2)° β = 98.118 (2)° γ = 113.043 (2)° V = 544.9 (1) Å3 Z = 1 Mo Kα radiation μ = 2.43 mm−1 T = 291 (2) K 0.33 × 0.20 × 0.09 mm

Data collection

Bruker APEXII CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.504, T max = 0.811 3270 measured reflections 2385 independent reflections 2224 reflections with I > 2σ(I) R int = 0.009

Refinement

R[F 2 > 2σ(F 2)] = 0.023 wR(F 2) = 0.067 S = 1.10 2385 reflections 149 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.48 e Å−3 Δρmin = −0.34 e Å−3 Data collection: APEX2 (Bruker, 2004 ▶); cell refinement: APEX2; data reduction: SAINT (Bruker, 2004 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536808000779/im2051sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808000779/im2051Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Cu2(C8H11N2O3S)2Cl2]Z = 1
Mr = 628.28F000 = 318
Triclinic, P1Dx = 1.915 Mg m3
Hall symbol: -P 1Mo Kα radiation λ = 0.71073 Å
a = 8.294 (1) ÅCell parameters from 2667 reflections
b = 8.362 (1) Åθ = 2.4–28.3º
c = 9.110 (1) ŵ = 2.43 mm1
α = 103.773 (2)ºT = 291 (2) K
β = 98.118 (2)ºBlock, blue
γ = 113.043 (2)º0.33 × 0.20 × 0.09 mm
V = 544.9 (1) Å3
Bruker APEXII CCD area-detector diffractometer2385 independent reflections
Radiation source: fine-focus sealed tube2224 reflections with I > 2σ(I)
Monochromator: graphiteRint = 0.009
T = 291(2) Kθmax = 27.5º
φ and ω scansθmin = 2.4º
Absorption correction: multi-scan(SADABS; Sheldrick, 1996)h = −10→10
Tmin = 0.505, Tmax = 0.811k = −10→10
3270 measured reflectionsl = −9→11
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.023H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.067  w = 1/[σ2(Fo2) + (0.037P)2 + 0.2091P] where P = (Fo2 + 2Fc2)/3
S = 1.10(Δ/σ)max = 0.001
2385 reflectionsΔρmax = 0.48 e Å3
149 parametersΔρmin = −0.34 e Å3
Primary atom site location: structure-invariant direct methodsExtinction correction: none
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes)are estimated using the full covariance matrix. The cell e.s.d.'s are takeninto account individually in the estimation of e.s.d.'s in distances, anglesand torsion angles; correlations between e.s.d.'s in cell parameters are onlyused when they are defined by crystal symmetry. An approximate (isotropic)treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger
xyzUiso*/Ueq
Cu1−0.00815 (3)0.79189 (3)0.40050 (2)0.02480 (9)
Cl10.21525 (6)1.15056 (7)0.48221 (5)0.02695 (12)
S10.25729 (6)0.72960 (7)0.64825 (6)0.02540 (12)
O10.09412 (19)0.7556 (2)0.59265 (16)0.0311 (3)
O20.4160 (2)0.9013 (2)0.72554 (19)0.0385 (4)
O30.2140 (2)0.6050 (2)0.74013 (19)0.0381 (4)
N1−0.1223 (2)0.7825 (2)0.18742 (18)0.0257 (3)
N20.1380 (2)0.6952 (2)0.2771 (2)0.0276 (3)
C1−0.2789 (3)0.7931 (4)0.1445 (3)0.0382 (5)
H1−0.34260.80780.21880.046*
C2−0.3480 (3)0.7828 (4)−0.0065 (3)0.0443 (6)
H2−0.45780.7878−0.03400.053*
C3−0.2519 (3)0.7652 (3)−0.1151 (2)0.0391 (5)
H3−0.29610.7581−0.21740.047*
C4−0.0881 (3)0.7580 (3)−0.0712 (2)0.0332 (5)
H4−0.02030.7481−0.14300.040*
C5−0.0275 (3)0.7659 (3)0.0813 (2)0.0264 (4)
C60.1491 (3)0.7631 (3)0.1417 (2)0.0314 (4)
H6A0.17260.68350.06000.038*
H6B0.24780.88570.17310.038*
C70.3187 (3)0.7178 (3)0.3579 (2)0.0287 (4)
H7A0.39880.84720.40990.034*
H7B0.37250.66990.28120.034*
C80.2998 (3)0.6170 (3)0.4776 (2)0.0296 (4)
H8A0.41040.60490.50740.035*
H8B0.20110.49440.42970.035*
H1N0.051 (4)0.570 (4)0.233 (3)0.045 (7)*
U11U22U33U12U13U23
Cu10.02148 (14)0.03819 (16)0.02055 (13)0.01626 (11)0.00702 (9)0.01323 (10)
Cl10.0222 (2)0.0363 (3)0.0269 (2)0.01426 (19)0.01029 (18)0.01360 (18)
S10.0178 (2)0.0297 (3)0.0285 (2)0.00845 (19)0.00306 (18)0.01438 (19)
O10.0270 (7)0.0504 (9)0.0255 (7)0.0230 (7)0.0082 (6)0.0174 (6)
O20.0268 (8)0.0346 (8)0.0401 (8)0.0044 (6)0.0010 (6)0.0087 (6)
O30.0324 (8)0.0455 (9)0.0432 (9)0.0154 (7)0.0091 (7)0.0296 (7)
N10.0243 (8)0.0332 (9)0.0211 (7)0.0132 (7)0.0053 (6)0.0109 (6)
N20.0229 (8)0.0328 (9)0.0281 (8)0.0125 (7)0.0071 (7)0.0112 (7)
C10.0324 (11)0.0617 (15)0.0289 (10)0.0259 (11)0.0085 (9)0.0196 (10)
C20.0384 (13)0.0680 (17)0.0339 (11)0.0295 (12)0.0035 (10)0.0217 (11)
C30.0485 (14)0.0455 (13)0.0227 (10)0.0210 (11)0.0021 (9)0.0139 (9)
C40.0422 (12)0.0353 (11)0.0224 (9)0.0166 (10)0.0103 (9)0.0096 (8)
C50.0294 (10)0.0245 (9)0.0236 (9)0.0101 (8)0.0073 (8)0.0080 (7)
C60.0297 (10)0.0429 (12)0.0262 (9)0.0174 (9)0.0123 (8)0.0139 (8)
C70.0204 (9)0.0343 (11)0.0319 (10)0.0118 (8)0.0072 (8)0.0115 (8)
C80.0246 (10)0.0280 (10)0.0388 (11)0.0132 (8)0.0078 (8)0.0130 (8)
Cu1—O11.9775 (14)C1—H10.9300
Cu1—N12.0051 (16)C2—C31.371 (4)
Cu1—N22.0268 (17)C2—H20.9300
Cu1—Cl1i2.2901 (5)C3—C41.390 (3)
Cu1—Cl12.6796 (7)C3—H30.9300
Cl1—Cu1i2.2901 (5)C4—C51.386 (3)
S1—O21.4380 (16)C4—H40.9300
S1—O31.4568 (15)C5—C61.501 (3)
S1—O11.4916 (14)C6—H6A0.9700
S1—C81.774 (2)C6—H6B0.9700
N1—C51.345 (3)C7—C81.519 (3)
N1—C11.346 (3)C7—H7A0.9700
N2—C61.475 (3)C7—H7B0.9700
N2—C71.492 (2)C8—H8A0.9700
N2—H1N0.95 (3)C8—H8B0.9700
C1—C21.382 (3)
O1—Cu1—N1169.95 (7)C3—C2—C1118.9 (2)
O1—Cu1—N292.73 (6)C3—C2—H2120.5
N1—Cu1—N281.18 (7)C1—C2—H2120.5
O1—Cu1—Cl1i89.03 (4)C2—C3—C4119.45 (19)
N1—Cu1—Cl1i95.57 (5)C2—C3—H3120.3
N2—Cu1—Cl1i169.68 (5)C4—C3—H3120.3
O1—Cu1—Cl196.00 (5)C5—C4—C3118.9 (2)
N1—Cu1—Cl192.76 (5)C5—C4—H4120.5
N2—Cu1—Cl197.82 (5)C3—C4—H4120.5
Cl1i—Cu1—Cl192.091 (19)N1—C5—C4121.49 (19)
Cu1i—Cl1—Cu187.910 (19)N1—C5—C6115.27 (16)
O2—S1—O3114.61 (10)C4—C5—C6123.21 (18)
O2—S1—O1112.23 (10)N2—C6—C5108.83 (16)
O3—S1—O1109.38 (9)N2—C6—H6A109.9
O2—S1—C8107.16 (10)C5—C6—H6A109.9
O3—S1—C8106.96 (10)N2—C6—H6B109.9
O1—S1—C8105.98 (9)C5—C6—H6B109.9
S1—O1—Cu1134.45 (9)H6A—C6—H6B108.3
C5—N1—C1119.10 (17)N2—C7—C8110.64 (16)
C5—N1—Cu1114.53 (13)N2—C7—H7A109.5
C1—N1—Cu1126.36 (14)C8—C7—H7A109.5
C6—N2—C7111.18 (16)N2—C7—H7B109.5
C6—N2—Cu1108.32 (13)C8—C7—H7B109.5
C7—N2—Cu1120.32 (13)H7A—C7—H7B108.1
C6—N2—H1N104.2 (16)C7—C8—S1113.05 (14)
C7—N2—H1N112.8 (16)C7—C8—H8A109.0
Cu1—N2—H1N98.3 (16)S1—C8—H8A109.0
N1—C1—C2122.1 (2)C7—C8—H8B109.0
N1—C1—H1119.0S1—C8—H8B109.0
C2—C1—H1119.0H8A—C8—H8B107.8
O1—Cu1—Cl1—Cu1i−89.25 (4)N1—Cu1—N2—C7158.15 (16)
N1—Cu1—Cl1—Cu1i95.68 (5)Cl1i—Cu1—N2—C7−129.6 (2)
N2—Cu1—Cl1—Cu1i177.15 (5)Cl1—Cu1—N2—C766.55 (14)
Cl1i—Cu1—Cl1—Cu1i0.0C5—N1—C1—C21.6 (4)
O2—S1—O1—Cu186.40 (15)Cu1—N1—C1—C2−179.12 (19)
O3—S1—O1—Cu1−145.24 (13)N1—C1—C2—C3−1.4 (4)
C8—S1—O1—Cu1−30.26 (16)C1—C2—C3—C40.0 (4)
N1—Cu1—O1—S170.6 (4)C2—C3—C4—C51.1 (4)
N2—Cu1—O1—S118.24 (15)C1—N1—C5—C4−0.5 (3)
Cl1i—Cu1—O1—S1−171.93 (14)Cu1—N1—C5—C4−179.82 (16)
Cl1—Cu1—O1—S1−79.93 (14)C1—N1—C5—C6177.54 (19)
O1—Cu1—N1—C5−68.7 (4)Cu1—N1—C5—C6−1.8 (2)
N2—Cu1—N1—C5−15.48 (14)C3—C4—C5—N1−0.9 (3)
Cl1i—Cu1—N1—C5174.39 (13)C3—C4—C5—C6−178.7 (2)
Cl1—Cu1—N1—C582.02 (14)C7—N2—C6—C5−170.83 (17)
O1—Cu1—N1—C1112.1 (4)Cu1—N2—C6—C5−36.51 (19)
N2—Cu1—N1—C1165.2 (2)N1—C5—C6—N225.8 (2)
Cl1i—Cu1—N1—C1−4.89 (19)C4—C5—C6—N2−156.21 (19)
Cl1—Cu1—N1—C1−97.27 (19)C6—N2—C7—C8−169.70 (17)
O1—Cu1—N2—C6−159.28 (14)Cu1—N2—C7—C862.2 (2)
N1—Cu1—N2—C628.76 (14)N2—C7—C8—S1−74.07 (19)
Cl1i—Cu1—N2—C6101.0 (3)O2—S1—C8—C7−65.44 (17)
Cl1—Cu1—N2—C6−62.84 (13)O3—S1—C8—C7171.21 (14)
O1—Cu1—N2—C7−29.89 (15)O1—S1—C8—C754.58 (17)
D—H···AD—HH···AD···AD—H···A
N2—H1N···O3ii0.95 (3)2.20 (3)2.966 (2)137 (2)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N2—H1N⋯O3i0.95 (3)2.20 (3)2.966 (2)137 (2)

Symmetry code: (i) .

  1 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

  1 in total
  1 in total

1.  Di-μ-chlorido-bis-[(2'-carb-oxybiphen-yl-2-carboxyl-ato-κO)(2,2':6',2''-terpyridine-κN,N',N'')cadmium(II)] hemihydrate.

Authors:  Wu Zhang; Wen-Juan Li
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-10-23
  1 in total

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