Literature DB >> 21201258

Tetra-aqua-diimidazole-nickel(II) naphthalene-1,5-disulfonate.

Ping Liu, Dong-Sheng Deng.   

Abstract

The triclinic unit cell of the title compound, [Ni(C(3)H(4)N(2))(2)(H(2)O)(4)](C(10)H(6)O(6)S(2)), contains one centrosymmetric cation and one centrosymmetric anion. In the cation, the Ni(II) ion is six-coordinated by two imidazole ligands [Ni-N = 2.0568 (14) Å] and four water mol-ecules [both independent Ni-O distances are 2.098 (1) Å] in a distorted octa-hedral geometry. Inter-molecular O-H⋯O and N-H⋯O hydrogen bonds form an extensive three-dimensional network, which consolidates the crystal packing.

Entities:  

Year:  2008        PMID: 21201258      PMCID: PMC2960432          DOI: 10.1107/S1600536807067761

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related literature, see: Côté & Shimizu (2003 ▶); Cai (2004 ▶); Cai et al. (2001 ▶); Chen et al. (2001 ▶, 2002 ▶); Lian et al. (2007 ▶); Liu et al. (2006 ▶); Zhou et al. (2004 ▶).

Experimental

Crystal data

[Ni(C3H4N2)2(H2O)4](C10H6O6S2) M = 553.21 Triclinic, a = 8.285 (3) Å b = 8.925 (3) Å c = 9.088 (3) Å α = 107.705 (5)° β = 101.628 (5)° γ = 111.967 (5)° V = 554.6 (3) Å3 Z = 1 Mo Kα radiation μ = 1.12 mm−1 T = 273 (2) K 0.37 × 0.28 × 0.22 mm

Data collection

Bruker SMART 1K CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2001 ▶) T min = 0.681, T max = 0.790 4834 measured reflections 2499 independent reflections 2262 reflections with I > 2σ(I) R int = 0.011

Refinement

R[F 2 > 2σ(F 2)] = 0.024 wR(F 2) = 0.067 S = 1.08 2499 reflections 167 parameters 6 restraints H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.35 e Å−3 Δρmin = −0.25 e Å−3 Data collection: SMART (Bruker, 1997 ▶); cell refinement: SAINT (Bruker, 2001 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 1997 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997 ▶); molecular graphics: SHELXTL (Bruker, 1997 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536807067761/cv2373sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536807067761/cv2373Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Ni(C3H4N2)2(H2O)4](C10H6O6S2)Z = 1
Mr = 553.21F000 = 286
Triclinic, P1Dx = 1.656 Mg m3
Hall symbol: -P 1Mo Kα radiation λ = 0.71073 Å
a = 8.285 (3) ÅCell parameters from 2499 reflections
b = 8.925 (3) Åθ = 2.5–27.5º
c = 9.088 (3) ŵ = 1.12 mm1
α = 107.705 (5)ºT = 273 (2) K
β = 101.628 (5)ºPlate, blue
γ = 111.967 (5)º0.37 × 0.28 × 0.22 mm
V = 554.6 (3) Å3
Bruker SMART 1K CCD diffractometer2499 independent reflections
Radiation source: fine-focus sealed tube2262 reflections with I > 2σ(I)
Monochromator: graphiteRint = 0.011
T = 273(2) Kθmax = 27.5º
φ and ω scansθmin = 2.5º
Absorption correction: multi-scan(SADABS; Bruker, 2001)h = −10→10
Tmin = 0.681, Tmax = 0.790k = −11→11
4834 measured reflectionsl = −11→11
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.024H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.067  w = 1/[σ2(Fo2) + (0.0346P)2 + 0.1772P] where P = (Fo2 + 2Fc2)/3
S = 1.08(Δ/σ)max = 0.001
2499 reflectionsΔρmax = 0.35 e Å3
167 parametersΔρmin = −0.25 e Å3
6 restraintsExtinction correction: none
Primary atom site location: structure-invariant direct methods
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Ni10.50000.50000.50000.02611 (9)
N10.28615 (18)0.55991 (17)0.43827 (16)0.0318 (3)
O1W0.31627 (16)0.23254 (16)0.43179 (17)0.0400 (3)
O2W0.50259 (17)0.42911 (17)0.25854 (14)0.0370 (3)
S10.21612 (5)0.14229 (5)0.81936 (4)0.02708 (10)
C10.41626 (19)0.11368 (19)0.88348 (17)0.0259 (3)
C50.41915 (19)0.01134 (18)0.97747 (17)0.0248 (3)
O30.06491 (16)−0.03557 (16)0.71539 (15)0.0406 (3)
O20.18864 (17)0.22940 (17)0.96754 (15)0.0407 (3)
O10.25746 (18)0.25029 (18)0.72669 (17)0.0436 (3)
N20.1179 (2)0.6991 (2)0.4648 (2)0.0478 (4)
H7A0.08260.77570.50810.057*
C20.5648 (2)0.1890 (2)0.8392 (2)0.0353 (3)
H2A0.56100.25600.77890.042*
C30.7231 (2)0.1653 (2)0.8846 (2)0.0390 (4)
H3A0.82350.21690.85410.047*
C70.0278 (3)0.5634 (3)0.3116 (3)0.0449 (4)
H2B−0.08310.53500.23350.054*
C80.1323 (2)0.4782 (2)0.2957 (2)0.0384 (4)
H8A0.10450.37920.20250.046*
C60.2709 (3)0.6926 (3)0.5365 (2)0.0459 (4)
H6A0.35600.77190.64250.055*
C40.7313 (2)0.0678 (2)0.9726 (2)0.0317 (3)
H4A0.83660.05261.00060.038*
H2WA0.570 (3)0.510 (2)0.241 (3)0.057 (7)*
H2WB0.402 (3)0.368 (3)0.176 (3)0.054 (6)*
H1WA0.215 (2)0.179 (3)0.357 (2)0.062 (7)*
H1WB0.302 (3)0.211 (4)0.511 (2)0.075 (9)*
U11U22U33U12U13U23
Ni10.02173 (14)0.02598 (14)0.02342 (14)0.00944 (11)0.00564 (10)0.00513 (10)
N10.0287 (6)0.0320 (7)0.0311 (6)0.0147 (5)0.0101 (5)0.0084 (5)
O1W0.0273 (6)0.0327 (6)0.0433 (7)0.0060 (5)0.0060 (5)0.0096 (5)
O2W0.0350 (6)0.0404 (7)0.0274 (6)0.0143 (5)0.0094 (5)0.0094 (5)
S10.02158 (17)0.02921 (19)0.02718 (19)0.01217 (14)0.00530 (14)0.00956 (14)
C10.0207 (6)0.0278 (7)0.0256 (7)0.0112 (5)0.0059 (5)0.0086 (5)
C50.0207 (6)0.0249 (7)0.0235 (6)0.0089 (5)0.0068 (5)0.0063 (5)
O30.0256 (5)0.0360 (6)0.0415 (7)0.0106 (5)0.0003 (5)0.0055 (5)
O20.0353 (6)0.0498 (7)0.0359 (6)0.0267 (6)0.0115 (5)0.0088 (5)
O10.0405 (7)0.0530 (7)0.0522 (7)0.0265 (6)0.0175 (6)0.0337 (6)
N20.0513 (9)0.0465 (9)0.0621 (10)0.0348 (8)0.0301 (8)0.0216 (8)
C20.0299 (8)0.0428 (9)0.0413 (9)0.0175 (7)0.0154 (7)0.0251 (7)
C30.0267 (8)0.0513 (10)0.0506 (10)0.0182 (7)0.0214 (7)0.0308 (8)
C70.0343 (9)0.0536 (11)0.0540 (11)0.0253 (8)0.0156 (8)0.0254 (9)
C80.0304 (8)0.0403 (9)0.0368 (9)0.0181 (7)0.0064 (7)0.0083 (7)
C60.0470 (10)0.0432 (10)0.0400 (9)0.0251 (8)0.0129 (8)0.0049 (8)
C40.0215 (7)0.0382 (8)0.0372 (8)0.0145 (6)0.0116 (6)0.0168 (7)
Ni1—N1i2.0568 (14)C1—C51.431 (2)
Ni1—N12.0568 (14)C5—C4ii1.422 (2)
Ni1—O2Wi2.0979 (13)C5—C5ii1.427 (3)
Ni1—O2W2.0979 (13)N2—C61.334 (2)
Ni1—O1W2.0978 (13)N2—C71.357 (3)
Ni1—O1Wi2.0978 (13)N2—H7A0.8600
N1—C61.315 (2)C2—C31.407 (2)
N1—C81.378 (2)C2—H2A0.9300
O1W—H1WA0.82 (2)C3—C41.359 (2)
O1W—H1WB0.82 (2)C3—H3A0.9300
O2W—H2WA0.81 (2)C7—C81.351 (2)
O2W—H2WB0.81 (2)C7—H2B0.9300
S1—O21.4453 (12)C8—H8A0.9300
S1—O31.4508 (13)C6—H6A0.9300
S1—O11.4556 (13)C4—C5ii1.422 (2)
S1—C11.7811 (15)C4—H4A0.9300
C1—C21.369 (2)
N1i—Ni1—N1180.0O1—S1—C1106.33 (7)
N1i—Ni1—O2Wi91.34 (5)C2—C1—C5121.07 (13)
N1—Ni1—O2Wi88.66 (5)C2—C1—S1118.79 (12)
N1i—Ni1—O2W88.66 (5)C5—C1—S1120.14 (10)
N1—Ni1—O2W91.34 (5)C4ii—C5—C5ii119.05 (17)
O2Wi—Ni1—O2W180.0C4ii—C5—C1122.89 (13)
N1i—Ni1—O1W87.22 (6)C5ii—C5—C1118.05 (16)
N1—Ni1—O1W92.78 (6)C6—N2—C7107.87 (15)
O2Wi—Ni1—O1W91.48 (5)C6—N2—H7A126.1
O2W—Ni1—O1W88.52 (5)C7—N2—H7A126.1
N1i—Ni1—O1Wi92.78 (6)C1—C2—C3120.14 (15)
N1—Ni1—O1Wi87.22 (6)C1—C2—H2A119.9
O2Wi—Ni1—O1Wi88.52 (5)C3—C2—H2A119.9
O2W—Ni1—O1Wi91.48 (5)C4—C3—C2120.80 (14)
O1W—Ni1—O1Wi180.0C4—C3—H3A119.6
C6—N1—C8104.96 (14)C2—C3—H3A119.6
C6—N1—Ni1124.39 (12)C8—C7—N2105.88 (16)
C8—N1—Ni1130.65 (11)C8—C7—H2B127.1
Ni1—O1W—H1WA122.5 (16)N2—C7—H2B127.1
Ni1—O1W—H1WB113.1 (19)C7—C8—N1109.81 (16)
H1WA—O1W—H1WB107.7 (19)C7—C8—H8A125.1
Ni1—O2W—H2WA115.4 (16)N1—C8—H8A125.1
Ni1—O2W—H2WB121.1 (15)N1—C6—N2111.48 (16)
H2WA—O2W—H2WB106.8 (18)N1—C6—H6A124.3
O2—S1—O3113.08 (8)N2—C6—H6A124.3
O2—S1—O1112.57 (8)C3—C4—C5ii120.88 (14)
O3—S1—O1111.83 (8)C3—C4—H4A119.6
O2—S1—C1106.98 (7)C5ii—C4—H4A119.6
O3—S1—C1105.41 (7)
O2Wi—Ni1—N1—C637.27 (15)S1—C1—C5—C4ii−1.5 (2)
O2W—Ni1—N1—C6−142.73 (15)C2—C1—C5—C5ii−0.5 (2)
O1W—Ni1—N1—C6128.69 (15)S1—C1—C5—C5ii178.52 (13)
O1Wi—Ni1—N1—C6−51.31 (15)C5—C1—C2—C30.6 (2)
O2Wi—Ni1—N1—C8−142.13 (15)S1—C1—C2—C3−178.51 (14)
O2W—Ni1—N1—C837.87 (15)C1—C2—C3—C40.0 (3)
O1W—Ni1—N1—C8−50.71 (15)C6—N2—C7—C8−0.1 (2)
O1Wi—Ni1—N1—C8129.29 (15)N2—C7—C8—N10.2 (2)
O2—S1—C1—C2−121.03 (14)C6—N1—C8—C7−0.1 (2)
O3—S1—C1—C2118.35 (14)Ni1—N1—C8—C7179.38 (12)
O1—S1—C1—C2−0.52 (15)C8—N1—C6—N20.0 (2)
O2—S1—C1—C559.89 (13)Ni1—N1—C6—N2−179.51 (12)
O3—S1—C1—C5−60.73 (13)C7—N2—C6—N10.1 (2)
O1—S1—C1—C5−179.60 (12)C2—C3—C4—C5ii−0.6 (3)
C2—C1—C5—C4ii179.40 (15)
D—H···AD—HH···AD···AD—H···A
O1W—H1WA···O3iii0.82 (2)2.022 (15)2.7507 (18)148 (2)
O1W—H1WB···O10.82 (2)2.018 (14)2.788 (2)156 (3)
O2W—H2WA···O1i0.81 (2)1.962 (10)2.7496 (19)161 (2)
O2W—H2WB···O2iv0.81 (2)1.96 (2)2.7979 (18)173 (2)
N2—H7A···O3v0.862.192.981 (2)154
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O1W—H1WA⋯O3i0.82 (2)2.022 (15)2.7507 (18)148 (2)
O1W—H1WB⋯O10.82 (2)2.018 (14)2.788 (2)156 (3)
O2W—H2WA⋯O1ii0.81 (2)1.962 (10)2.7496 (19)161 (2)
O2W—H2WB⋯O2iii0.81 (2)1.96 (2)2.7979 (18)173 (2)
N2—H7A⋯O3iv0.862.192.981 (2)154

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .

  2 in total

1.  Variation in the coordination mode of arenedisulfonates: syntheses and structural characterization of mononuclear and dinuclear cadmium(II) arenedisulfonate complexes with two- to zero-dimensional architectures.

Authors:  Cai-Hong Chen; Jiwen Cai; Cheng-Zhu Liao; Xiao-Long Feng; Xiao-Ming Chen; Seik Weng Ng
Journal:  Inorg Chem       Date:  2002-09-23       Impact factor: 5.165

2.  Reversible and selective amine interactions of [Cd(mu2-N,O-p-NH2C6H4SO3)2(H2O)2]n.

Authors:  Jin-Sen Zhou; Jiwen Cai; Li Wang; Seik-Weng Ng
Journal:  Dalton Trans       Date:  2004-03-31       Impact factor: 4.390

  2 in total

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