| Literature DB >> 21201251 |
Ya-Hui Zhao1, Xing Yuan, Wei-Chao Qin, Lian-Xi Sheng, Yun-Zheng Ding.
Abstract
The title compound, [Cd(C(11)H(5)N(2)O(2))(2)(H(2)O)(2)], is a mononuclear complex consisting of a Cd(II) atom, two 3-hydr-oxy-4,5-diaza-fluoren-9-one ligands and two coordinated water mol-ecules. The Cd(II) atom, lying on a twofold axis, displays a distorted octa-hedral coordintion. Adjacent mol-ecules are linked by O-H⋯O hydrogen bonds and π-π inter-actions [centroid-centroid distance = 3.84 (1) Å], leading to a one-dimensional chain. Weak C-H⋯O hydrogen bonds connect the chains into a two-dimensional supra-molecular structure.Entities:
Year: 2008 PMID: 21201251 PMCID: PMC2960196 DOI: 10.1107/S1600536807067323
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Cd(C11H5N2O2)2(H2O)2] | |
| Monoclinic, | Mo |
| Hall symbol: -C 2yc | Cell parameters from 4465 reflections |
| θ = 3.0–28.3º | |
| µ = 1.12 mm−1 | |
| β = 110.622 (5)º | Block, colorless |
| 0.26 × 0.21 × 0.17 mm | |
| Rigaku R-AXIS RAPID diffractometer | 2406 independent reflections |
| Radiation source: rotation anode | 1965 reflections with |
| Monochromator: graphite | |
| θmax = 28.3º | |
| ω scans | θmin = 3.0º |
| Absorption correction: multi-scan(ABSCOR; Higashi, 1995) | |
| 5972 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H atoms treated by a mixture of independent and constrained refinement | |
| | |
| (Δ/σ)max < 0.001 | |
| 2406 reflections | Δρmax = 0.62 e Å−3 |
| 158 parameters | Δρmin = −0.36 e Å−3 |
| 2 restraints | Extinction correction: none |
| Primary atom site location: structure-invariant direct methods |
| Cd1 | 1.0000 | 0.24267 (5) | 0.2500 | 0.04153 (11) | |
| N1 | 0.91692 (7) | 0.1412 (4) | 0.15373 (15) | 0.0337 (4) | |
| N2 | 0.90481 (8) | 0.5376 (4) | −0.00770 (16) | 0.0400 (5) | |
| O2 | 0.95401 (7) | −0.0756 (3) | 0.29552 (14) | 0.0455 (4) | |
| O3 | 0.75172 (7) | 0.0883 (4) | −0.09790 (15) | 0.0553 (5) | |
| C1 | 0.91486 (9) | −0.0461 (4) | 0.21600 (18) | 0.0358 (5) | |
| C2 | 0.87029 (11) | −0.1903 (5) | 0.1904 (2) | 0.0430 (6) | |
| H2 | 0.8695 | −0.3203 | 0.2317 | 0.052* | |
| C3 | 0.82874 (10) | −0.1395 (5) | 0.1061 (2) | 0.0423 (6) | |
| H3 | 0.7995 | −0.2322 | 0.0897 | 0.051* | |
| C4 | 0.83130 (9) | 0.0555 (5) | 0.04508 (18) | 0.0366 (5) | |
| C5 | 0.79449 (9) | 0.1567 (5) | −0.0489 (2) | 0.0404 (6) | |
| C6 | 0.82108 (9) | 0.3654 (5) | −0.07684 (18) | 0.0377 (5) | |
| C7 | 0.80569 (10) | 0.5278 (5) | −0.1560 (2) | 0.0470 (6) | |
| H7 | 0.7731 | 0.5249 | −0.2045 | 0.056* | |
| C8 | 0.84113 (12) | 0.6963 (5) | −0.1601 (2) | 0.0501 (7) | |
| H8 | 0.8325 | 0.8102 | −0.2122 | 0.060* | |
| C9 | 0.88918 (12) | 0.6950 (5) | −0.0868 (2) | 0.0460 (7) | |
| H9 | 0.9122 | 0.8091 | −0.0920 | 0.055* | |
| C10 | 0.87021 (9) | 0.3786 (4) | −0.00494 (17) | 0.0334 (5) | |
| C11 | 0.87612 (9) | 0.1865 (4) | 0.07194 (19) | 0.0327 (5) | |
| O1 | 0.99406 (8) | 0.4960 (4) | 0.36946 (16) | 0.0505 (5) | |
| H1A | 1.0223 (8) | 0.519 (6) | 0.412 (2) | 0.065 (10)* | |
| H1B | 0.9809 (13) | 0.630 (4) | 0.353 (3) | 0.067 (11)* |
| Cd1 | 0.02980 (15) | 0.03837 (17) | 0.04841 (18) | 0.000 | 0.00383 (11) | 0.000 |
| N1 | 0.0281 (10) | 0.0314 (10) | 0.0377 (11) | −0.0028 (8) | 0.0066 (8) | 0.0013 (9) |
| N2 | 0.0387 (11) | 0.0401 (12) | 0.0400 (11) | −0.0032 (9) | 0.0125 (9) | 0.0036 (9) |
| O2 | 0.0427 (10) | 0.0407 (10) | 0.0454 (10) | 0.0028 (8) | 0.0058 (8) | 0.0076 (8) |
| O3 | 0.0343 (10) | 0.0707 (14) | 0.0495 (11) | −0.0142 (9) | 0.0005 (8) | −0.0081 (10) |
| C1 | 0.0369 (12) | 0.0317 (12) | 0.0382 (13) | 0.0023 (10) | 0.0124 (10) | 0.0002 (10) |
| C2 | 0.0489 (16) | 0.0348 (13) | 0.0490 (15) | −0.0056 (11) | 0.0218 (13) | 0.0017 (11) |
| C3 | 0.0385 (14) | 0.0400 (14) | 0.0494 (15) | −0.0123 (11) | 0.0168 (12) | −0.0068 (12) |
| C4 | 0.0296 (11) | 0.0403 (13) | 0.0385 (13) | −0.0051 (10) | 0.0103 (10) | −0.0061 (11) |
| C5 | 0.0331 (13) | 0.0464 (14) | 0.0396 (13) | −0.0031 (11) | 0.0100 (11) | −0.0089 (12) |
| C6 | 0.0317 (12) | 0.0444 (15) | 0.0345 (12) | −0.0003 (10) | 0.0085 (10) | −0.0048 (11) |
| C7 | 0.0415 (14) | 0.0581 (17) | 0.0355 (13) | 0.0076 (12) | 0.0062 (11) | 0.0035 (12) |
| C8 | 0.0597 (18) | 0.0509 (16) | 0.0383 (14) | 0.0123 (14) | 0.0154 (13) | 0.0101 (12) |
| C9 | 0.0500 (16) | 0.0423 (15) | 0.0499 (16) | 0.0011 (12) | 0.0227 (13) | 0.0083 (12) |
| C10 | 0.0318 (11) | 0.0350 (13) | 0.0312 (11) | −0.0004 (9) | 0.0086 (9) | −0.0022 (10) |
| C11 | 0.0296 (12) | 0.0320 (12) | 0.0353 (12) | −0.0025 (9) | 0.0097 (10) | −0.0030 (10) |
| O1 | 0.0448 (12) | 0.0426 (11) | 0.0532 (12) | 0.0076 (9) | 0.0039 (10) | −0.0025 (10) |
| Cd1—O1 | 2.233 (2) | C3—C4 | 1.397 (4) |
| Cd1—O1i | 2.233 (2) | C3—H3 | 0.9300 |
| Cd1—N1i | 2.3217 (19) | C4—C11 | 1.391 (3) |
| Cd1—N1 | 2.3217 (19) | C4—C5 | 1.468 (4) |
| Cd1—O2 | 2.410 (2) | C5—C6 | 1.507 (4) |
| Cd1—O2i | 2.410 (2) | C6—C7 | 1.374 (4) |
| N1—C11 | 1.327 (3) | C6—C10 | 1.396 (3) |
| N1—C1 | 1.371 (3) | C7—C8 | 1.386 (4) |
| N2—C10 | 1.328 (3) | C7—H7 | 0.9300 |
| N2—C9 | 1.355 (3) | C8—C9 | 1.380 (4) |
| O2—C1 | 1.269 (3) | C8—H8 | 0.9300 |
| O3—C5 | 1.219 (3) | C9—H9 | 0.9300 |
| C1—C2 | 1.427 (4) | C10—C11 | 1.482 (4) |
| C2—C3 | 1.365 (4) | O1—H1A | 0.817 (18) |
| C2—H2 | 0.9300 | O1—H1B | 0.832 (19) |
| O1—Cd1—O1i | 101.59 (13) | C4—C3—H3 | 120.9 |
| O1—Cd1—N1i | 92.77 (7) | C11—C4—C3 | 118.8 (2) |
| O1i—Cd1—N1i | 105.03 (8) | C11—C4—C5 | 109.1 (2) |
| O1—Cd1—N1 | 105.03 (8) | C3—C4—C5 | 132.1 (2) |
| O1i—Cd1—N1 | 92.77 (7) | O3—C5—C4 | 128.9 (3) |
| N1i—Cd1—N1 | 151.82 (11) | O3—C5—C6 | 125.5 (3) |
| O1—Cd1—O2 | 94.62 (9) | C4—C5—C6 | 105.5 (2) |
| O1i—Cd1—O2 | 148.19 (7) | C7—C6—C10 | 119.6 (2) |
| N1i—Cd1—O2 | 101.27 (7) | C7—C6—C5 | 132.1 (2) |
| N1—Cd1—O2 | 56.38 (7) | C10—C6—C5 | 108.3 (2) |
| O1—Cd1—O2i | 148.19 (7) | C6—C7—C8 | 116.8 (2) |
| O1i—Cd1—O2i | 94.62 (9) | C6—C7—H7 | 121.6 |
| N1i—Cd1—O2i | 56.38 (7) | C8—C7—H7 | 121.6 |
| N1—Cd1—O2i | 101.27 (7) | C9—C8—C7 | 120.0 (3) |
| O2—Cd1—O2i | 85.23 (11) | C9—C8—H8 | 120.0 |
| C11—N1—C1 | 118.1 (2) | C7—C8—H8 | 120.0 |
| C11—N1—Cd1 | 147.41 (17) | N2—C9—C8 | 124.0 (3) |
| C1—N1—Cd1 | 94.51 (14) | N2—C9—H9 | 118.0 |
| C10—N2—C9 | 115.1 (2) | C8—C9—H9 | 118.0 |
| C1—O2—Cd1 | 93.31 (15) | N2—C10—C6 | 124.6 (2) |
| O2—C1—N1 | 115.7 (2) | N2—C10—C11 | 127.3 (2) |
| O2—C1—C2 | 124.3 (2) | C6—C10—C11 | 108.1 (2) |
| N1—C1—C2 | 120.0 (2) | N1—C11—C4 | 124.2 (2) |
| C3—C2—C1 | 120.8 (3) | N1—C11—C10 | 126.9 (2) |
| C3—C2—H2 | 119.6 | C4—C11—C10 | 108.9 (2) |
| C1—C2—H2 | 119.6 | Cd1—O1—H1A | 109 (2) |
| C2—C3—C4 | 118.2 (2) | Cd1—O1—H1B | 120 (2) |
| C2—C3—H3 | 120.9 | H1A—O1—H1B | 107 (3) |
| O1—Cd1—N1—C11 | 93.5 (3) | C3—C4—C5—C6 | −179.4 (3) |
| O1i—Cd1—N1—C11 | −9.3 (3) | O3—C5—C6—C7 | 2.3 (5) |
| N1i—Cd1—N1—C11 | −139.1 (3) | C4—C5—C6—C7 | −179.5 (3) |
| O2—Cd1—N1—C11 | 179.0 (3) | O3—C5—C6—C10 | −176.9 (3) |
| O2i—Cd1—N1—C11 | −104.6 (3) | C4—C5—C6—C10 | 1.4 (3) |
| O1—Cd1—N1—C1 | −87.51 (16) | C10—C6—C7—C8 | 0.9 (4) |
| O1i—Cd1—N1—C1 | 169.70 (14) | C5—C6—C7—C8 | −178.2 (3) |
| N1i—Cd1—N1—C1 | 39.89 (13) | C6—C7—C8—C9 | 0.1 (4) |
| O2—Cd1—N1—C1 | −2.01 (13) | C10—N2—C9—C8 | 0.3 (4) |
| O2i—Cd1—N1—C1 | 74.44 (15) | C7—C8—C9—N2 | −0.7 (5) |
| O1—Cd1—O2—C1 | 107.16 (15) | C9—N2—C10—C6 | 0.7 (4) |
| O1i—Cd1—O2—C1 | −13.7 (2) | C9—N2—C10—C11 | −179.8 (2) |
| N1i—Cd1—O2—C1 | −159.08 (14) | C7—C6—C10—N2 | −1.3 (4) |
| N1—Cd1—O2—C1 | 2.17 (14) | C5—C6—C10—N2 | 178.0 (2) |
| O2i—Cd1—O2—C1 | −104.75 (16) | C7—C6—C10—C11 | 179.0 (2) |
| Cd1—O2—C1—N1 | −3.4 (2) | C5—C6—C10—C11 | −1.7 (3) |
| Cd1—O2—C1—C2 | 177.7 (2) | C1—N1—C11—C4 | −0.2 (4) |
| C11—N1—C1—O2 | −177.1 (2) | Cd1—N1—C11—C4 | 178.7 (2) |
| Cd1—N1—C1—O2 | 3.5 (2) | C1—N1—C11—C10 | −180.0 (2) |
| C11—N1—C1—C2 | 1.9 (3) | Cd1—N1—C11—C10 | −1.1 (5) |
| Cd1—N1—C1—C2 | −177.5 (2) | C3—C4—C11—N1 | −1.3 (4) |
| O2—C1—C2—C3 | 176.7 (2) | C5—C4—C11—N1 | 179.7 (2) |
| N1—C1—C2—C3 | −2.2 (4) | C3—C4—C11—C10 | 178.6 (2) |
| C1—C2—C3—C4 | 0.7 (4) | C5—C4—C11—C10 | −0.5 (3) |
| C2—C3—C4—C11 | 0.9 (4) | N2—C10—C11—N1 | 1.6 (4) |
| C2—C3—C4—C5 | 179.7 (3) | C6—C10—C11—N1 | −178.8 (2) |
| C11—C4—C5—O3 | 177.7 (3) | N2—C10—C11—C4 | −178.3 (2) |
| C3—C4—C5—O3 | −1.2 (5) | C6—C10—C11—C4 | 1.4 (3) |
| C11—C4—C5—C6 | −0.5 (3) |
| H··· | ||||
| O1—H1A···N2i | 0.82 (2) | 2.02 (2) | 2.832 (3) | 172 (3) |
| O1—H1B···O2ii | 0.83 (2) | 1.86 (2) | 2.686 (3) | 170 (4) |
| C3—H3···O3iii | 0.93 | 2.48 | 3.351 (5) | 156 |
| Cd1—O1 | 2.233 (2) |
| Cd1—N1 | 2.3217 (19) |
| Cd1—O2 | 2.410 (2) |
| O1—Cd1—O1i | 101.59 (13) |
| O1—Cd1—N1i | 92.77 (7) |
| O1—Cd1—N1 | 105.03 (8) |
| N1i—Cd1—N1 | 151.82 (11) |
| O1—Cd1—O2 | 94.62 (9) |
| O1i—Cd1—O2 | 148.19 (7) |
| N1i—Cd1—O2 | 101.27 (7) |
| N1—Cd1—O2 | 56.38 (7) |
| O2—Cd1—O2i | 85.23 (11) |
Symmetry code: (i) .
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O1—H1 | 0.82 (2) | 2.02 (2) | 2.832 (3) | 172 (3) |
| O1—H1 | 0.83 (2) | 1.86 (2) | 2.686 (3) | 170 (4) |
| C3—H3⋯O3iii | 0.93 | 2.48 | 3.351 (5) | 156 |
Symmetry codes: (i) ; (ii) ; (iii) .