Literature DB >> 21201246

The dehydrated copper silicate Na(2)[Cu(2)Si(4)O(11)]: a three-dimensional microporous framework with a linear Si-O-Si linkage.

Luís Cunha-Silva1, Paula Brandão, João Rocha, Filipe A Almeida Paz.   

Abstract

The structure of the title dehydrated copper silicate, disodium dicopper undeca-oxide tetra-silicate, Na(2)(Cu(2)O(11)Si(4)), was determined by single-crystal X-ray diffraction from a non-merohedral twin. It exhibits an effective three-dimensional microporous framework with the major channels, in which the Na(+) cations are placed, running along the a-axis direction and smaller channels observed along the b-axis direction. The structure is unusual in that it contains a symmetry-constrained Si-O-Si angle of 180°. The Cu centre is coordinated to five O atoms, exhibiting a slightly distorted square-pyramidal coordination geometry. The Na cation is interacting with five neighbouring O atoms, exhibiting an uncharacteristic coordination environment.

Entities:  

Year:  2008        PMID: 21201246      PMCID: PMC2960335          DOI: 10.1107/S1600536808001608

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related literature, see: Brandão et al. (2005 ▶); Haile & Wuensch (2000 ▶); Liebau (1985 ▶); Rocha & Anderson (2000 ▶); Rocha & Lin (2005 ▶); dos Santos et al. (2005 ▶); Ananias et al. (2001 ▶, 2006 ▶); Anderson et al. (1994 ▶); Ferreira et al. (2003 ▶).

Experimental

Crystal data

Na2(Cu2O11Si4) M = 461.44 Triclinic, a = 5.190 (2) Å b = 6.299 (3) Å c = 8.196 (4) Å α = 96.390 (7)° β = 97.281 (7)° γ = 100.461 (7)° V = 258.9 (2) Å3 Z = 1 Mo Kα radiation μ = 4.71 mm−1 T = 298 (2) K 0.28 × 0.08 × 0.04 mm

Data collection

Bruker SMART CCD 1000 diffractometer Absorption correction: multi-scan (TWINABS; Sheldrick, 2002 ▶) T min = 0.627, T max = 0.834 1587 measured reflections 1043 independent reflections 782 reflections with I > 2σ(I) R int = 0.042

Refinement

R[F 2 > 2σ(F 2)] = 0.042 wR(F 2) = 0.119 S = 1.01 1043 reflections 88 parameters Δρmax = 1.40 e Å−3 Δρmin = −1.58 e Å−3 Data collection: SMART (Bruker, 1998 ▶); cell refinement: SMART; data reduction: SAINT-Plus (Bruker, 2003 ▶); program(s) used to solve structure: SIR92 (Altomare et al., 1993 ▶); program(s) used to refine structure: SHELXTL (Sheldrick, 2008 ▶); molecular graphics: DIAMOND (Brandenburg, 2007 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536808001608/br2065sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808001608/br2065Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
Na2(Cu2O11Si4)Z = 1
Mr = 461.44F000 = 224
Triclinic, P1Dx = 2.960 Mg m3
Hall symbol: -P 1Mo Kα radiation λ = 0.71073 Å
a = 5.190 (2) ÅCell parameters from 758 reflections
b = 6.299 (3) Åθ = 8.1–58.1º
c = 8.196 (4) ŵ = 4.71 mm1
α = 96.390 (7)ºT = 298 (2) K
β = 97.281 (7)ºPlate, black
γ = 100.461 (7)º0.28 × 0.08 × 0.04 mm
V = 258.9 (2) Å3
Bruker SMART CCD 1000 diffractometer1043 independent reflections
Radiation source: fine-focus sealed tube782 reflections with I > 2σ(I)
Monochromator: graphiteRint = 0.042
T = 298(2) Kθmax = 26.4º
ω scansθmin = 3.9º
Absorption correction: multi-scan(TWINABS; Sheldrick, 2002)h = −6→6
Tmin = 0.627, Tmax = 0.834k = −7→7
1587 measured reflectionsl = 0→10
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.042  w = 1/[σ2(Fo2) + (0.0809P)2] where P = (Fo2 + 2Fc2)/3
wR(F2) = 0.119(Δ/σ)max < 0.001
S = 1.01Δρmax = 1.40 e Å3
1043 reflectionsΔρmin = −1.58 e Å3
88 parametersExtinction correction: none
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cu10.70666 (10)−0.10891 (9)0.93472 (8)0.0096 (3)
Na10.8700 (4)0.3540 (3)1.1990 (3)0.0235 (6)
Si11.0175 (2)0.1358 (2)0.67930 (18)0.0087 (4)
Si20.5954 (3)0.3456 (2)0.80969 (18)0.0089 (4)
O11.00000.00000.50000.0217 (13)
O21.0064 (7)−0.0190 (6)0.8196 (5)0.0127 (8)
O30.7804 (6)0.2736 (6)0.6719 (5)0.0126 (8)
O40.2923 (6)0.3209 (5)0.7137 (5)0.0144 (8)
O50.7200 (7)0.5899 (6)0.8873 (5)0.0170 (9)
O60.5974 (6)0.1760 (5)0.9452 (5)0.0107 (8)
U11U22U33U12U13U23
Cu10.0054 (4)0.0083 (4)0.0159 (4)0.0011 (2)0.0051 (2)0.0018 (2)
Na10.0137 (11)0.0161 (12)0.0396 (16)0.0021 (9)0.0072 (10)−0.0030 (10)
Si10.0048 (7)0.0096 (7)0.0124 (8)0.0018 (5)0.0034 (5)0.0009 (5)
Si20.0040 (6)0.0078 (7)0.0155 (8)0.0013 (5)0.0042 (5)0.0018 (5)
O10.020 (3)0.024 (3)0.021 (3)0.006 (2)0.007 (2)−0.006 (2)
O20.0078 (17)0.0137 (18)0.018 (2)0.0033 (13)0.0040 (14)0.0045 (14)
O30.0057 (16)0.0169 (19)0.018 (2)0.0068 (14)0.0049 (14)0.0018 (14)
O40.0063 (16)0.0140 (18)0.023 (2)0.0017 (14)0.0014 (14)0.0061 (15)
O50.0145 (18)0.0100 (18)0.028 (2)0.0000 (14)0.0129 (16)0.0016 (15)
O60.0082 (16)0.0111 (17)0.016 (2)0.0039 (13)0.0061 (14)0.0050 (14)
Cu1—O5i1.909 (3)Si1—O4iv1.642 (4)
Cu1—O21.950 (4)Si2—O51.583 (4)
Cu1—O6ii1.970 (4)Si2—O61.625 (4)
Cu1—O61.974 (3)Si2—O41.639 (3)
Cu1—O2iii2.316 (4)Si2—O31.650 (4)
Cu1—Cu1ii2.9921 (13)Si2—Cu1ii3.1221 (19)
Cu1—Cu1iii3.1031 (15)O1—Si1v1.5991 (14)
Cu1—Si2ii3.1221 (19)O2—Cu1iii2.316 (4)
Cu1—Si13.1673 (19)O4—Si1vi1.642 (4)
Si1—O21.588 (4)O5—Cu1vii1.909 (3)
Si1—O11.5991 (14)O6—Cu1ii1.970 (4)
Si1—O31.629 (3)
O5i—Cu1—O292.49 (15)O2iii—Cu1—Si1100.98 (10)
O5i—Cu1—O6ii91.91 (15)Cu1ii—Cu1—Si1115.23 (4)
O2—Cu1—O6ii175.60 (13)Cu1iii—Cu1—Si164.33 (4)
O5i—Cu1—O6164.27 (15)Si2ii—Cu1—Si1179.25 (4)
O2—Cu1—O694.42 (14)O2—Si1—O1111.33 (15)
O6ii—Cu1—O681.32 (16)O2—Si1—O3112.6 (2)
O5i—Cu1—O2iii105.60 (16)O1—Si1—O3108.16 (15)
O2—Cu1—O2iii87.05 (15)O2—Si1—O4iv111.48 (19)
O6ii—Cu1—O2iii91.76 (14)O1—Si1—O4iv108.08 (16)
O6—Cu1—O2iii88.87 (14)O3—Si1—O4iv104.92 (18)
O5i—Cu1—Cu1ii131.06 (12)O1—Si1—Cu1115.96 (7)
O2—Cu1—Cu1ii135.03 (10)O3—Si1—Cu184.08 (15)
O6ii—Cu1—Cu1ii40.70 (10)O4iv—Si1—Cu1129.55 (15)
O6—Cu1—Cu1ii40.62 (10)O5—Si2—O6113.2 (2)
O2iii—Cu1—Cu1ii90.41 (9)O5—Si2—O4111.75 (19)
O5i—Cu1—Cu1iii103.18 (12)O6—Si2—O4109.3 (2)
O2—Cu1—Cu1iii48.19 (11)O5—Si2—O3107.1 (2)
O6ii—Cu1—Cu1iii130.50 (11)O6—Si2—O3107.00 (19)
O6—Cu1—Cu1iii91.93 (10)O4—Si2—O3108.15 (19)
O2iii—Cu1—Cu1iii38.86 (9)O5—Si2—Cu1ii109.62 (16)
Cu1ii—Cu1—Cu1iii116.74 (4)O4—Si2—Cu1ii81.61 (15)
O5i—Cu1—Si2ii73.75 (12)O3—Si2—Cu1ii134.72 (14)
O2—Cu1—Si2ii156.11 (11)Si1v—O1—Si1180.0
O6ii—Cu1—Si2ii26.72 (10)Si1—O2—Cu1126.8 (2)
O6—Cu1—Si2ii103.96 (11)Si1—O2—Cu1iii116.29 (18)
O2iii—Cu1—Si2ii78.31 (10)Cu1—O2—Cu1iii92.95 (15)
Cu1ii—Cu1—Si2ii64.59 (4)Si1—O3—Si2132.7 (3)
Cu1iii—Cu1—Si2ii115.04 (5)Si2—O4—Si1vi137.0 (2)
O5i—Cu1—Si1106.73 (13)Si2—O5—Cu1vii152.9 (2)
O2—Cu1—Si123.68 (11)Si2—O6—Cu1ii120.24 (18)
O6ii—Cu1—Si1153.39 (10)Si2—O6—Cu1130.3 (2)
O6—Cu1—Si175.74 (11)Cu1ii—O6—Cu198.68 (16)
Table 1

Selected bond lengths (Å)

Cu1—O5i1.909 (3)
Cu1—O21.950 (4)
Cu1—O6ii1.970 (4)
Cu1—O61.974 (3)
Cu1—O2iii2.316 (4)

Symmetry codes: (i) ; (ii) ; (iii) .

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