Literature DB >> 21201231

tert-Butyl 3-oxo-2-oxa-5-aza-bicyclo-[2.2.1]heptane-5-carboxyl-ate.

Marie-Charlotte Lechner, Emmanuel Aubert, Gilles Guichard, Claude Didierjean.   

Abstract

The title compound, C(10)H(15)NO(4), also known as N-tert-butyl-oxycarbonyl-allohydr-oxy-l-proline lactone, is quite similar to N-acetyl-allohydr-oxy-l-proline lactone [Lenstra, Petit & Geise (1979 ▶). Cryst. Struct. Commun. 8, 1023-1029], whereby both carbonyl groups point roughly in the same direction because of the trans conformation of the peptide bond.

Entities:  

Year:  2008        PMID: 21201231      PMCID: PMC2959344          DOI: 10.1107/S1600536808030651

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For general background, see: Allen (2002 ▶). For related structures, see: Didier et al. (2004 ▶); Lenstra et al. (1979 ▶); Papaioannou et al. (1989 ▶). For related synthesis, see: Gómez-Vidal & Silverman (2001 ▶). For related literature, see: Flack & Schwarzenbach (1988 ▶).

Experimental

Crystal data

C10H15NO4 M = 213.23 Monoclinic, a = 6.0710 (7) Å b = 9.3703 (11) Å c = 9.3002 (10) Å β = 100.013 (5)° V = 521.00 (10) Å3 Z = 2 Mo Kα radiation μ = 0.10 mm−1 T = 100 (2) K 0.3 × 0.2 × 0.2 mm

Data collection

Nonius KappaCCD area-detector diffractometer Absorption correction: none 5951 measured reflections 1143 independent reflections 1054 reflections with I > 2σ(I) R int = 0.066

Refinement

R[F 2 > 2σ(F 2)] = 0.052 wR(F 2) = 0.102 S = 1.20 1143 reflections 139 parameters 1 restraint H-atom parameters constrained Δρmax = 0.23 e Å−3 Δρmin = −0.22 e Å−3 Data collection: COLLECT (Nonius, 1998 ▶); cell refinement: SCALEPACK (Otwinowski & Minor, 1997 ▶); data reduction: DENZO (Otwinowski & Minor, 1997 ▶) and SCALEPACK; program(s) used to solve structure: SIR92 (Altomare et al., 1994 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶); software used to prepare material for publication: WinGX (Farrugia, 1999 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536808030651/ww2125sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808030651/ww2125Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C10H15NO4F(000) = 228
Mr = 213.23Dx = 1.359 Mg m3
Monoclinic, P21Mo Kα radiation, λ = 0.7107 Å
Hall symbol: P 2ybCell parameters from 11845 reflections
a = 6.0710 (7) Åθ = 0.4–26.4°
b = 9.3703 (11) ŵ = 0.11 mm1
c = 9.3002 (10) ÅT = 100 K
β = 100.013 (5)°Prism, colourless
V = 521.00 (10) Å30.3 × 0.2 × 0.2 mm
Z = 2
Nonius KappaCCD area-detector diffractometer1054 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.066
graphiteθmax = 26.6°, θmin = 3.1°
ω and φ scansh = −7→7
5951 measured reflectionsk = −11→11
1143 independent reflectionsl = −11→11
Refinement on F21 restraint
Least-squares matrix: fullH-atom parameters constrained
R[F2 > 2σ(F2)] = 0.052w = 1/[σ2(Fo2) + (0.0035P)2 + 0.6362P] where P = (Fo2 + 2Fc2)/3
wR(F2) = 0.102(Δ/σ)max < 0.001
S = 1.20Δρmax = 0.23 e Å3
1143 reflectionsΔρmin = −0.22 e Å3
139 parameters
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
xyzUiso*/Ueq
O10.3991 (4)0.3322 (3)0.3133 (3)0.0243 (6)
O20.0303 (4)0.2997 (3)0.2103 (3)0.0280 (7)
O30.3864 (4)−0.0967 (3)0.1079 (3)0.0262 (7)
O40.0299 (5)−0.1077 (3)0.1467 (3)0.0319 (7)
N10.3137 (5)0.1896 (4)0.1226 (4)0.0230 (7)
C10.3539 (7)0.4316 (4)0.4288 (4)0.0249 (9)
C20.2354 (7)0.5650 (4)0.3607 (5)0.0306 (10)
H2A0.31940.60520.28930.046*
H2B0.22650.63560.43720.046*
H2C0.08420.540.31170.046*
C30.2204 (8)0.3563 (5)0.5297 (5)0.0315 (10)
H3A0.0750.32740.47440.047*
H3B0.19770.42120.60850.047*
H3C0.30240.27170.57150.047*
C40.5884 (6)0.4670 (4)0.5062 (5)0.0266 (9)
H4A0.65740.38160.55560.04*
H4B0.58130.54230.57840.04*
H4C0.6780.50010.43470.04*
C50.2283 (6)0.2759 (4)0.2159 (4)0.0227 (8)
C60.5472 (7)0.1381 (4)0.1373 (5)0.0250 (9)
H6A0.60910.11010.2390.03*
H6B0.6460.210.10320.03*
C70.5098 (7)0.0093 (4)0.0356 (4)0.0265 (9)
H70.648−0.02810.0040.032*
C80.3299 (7)0.0625 (5)−0.0887 (4)0.0259 (9)
H8A0.37620.1478−0.13880.031*
H8B0.273−0.0127−0.16030.031*
C90.1701 (6)0.0969 (4)0.0167 (4)0.0233 (9)
H90.02040.1361−0.02750.028*
C100.1710 (7)−0.0459 (4)0.0960 (4)0.0256 (9)
U11U22U33U12U13U23
O10.0249 (14)0.0180 (14)0.0299 (14)−0.0012 (12)0.0044 (12)−0.0053 (12)
O20.0234 (14)0.0253 (16)0.0352 (16)0.0018 (13)0.0050 (12)−0.0054 (13)
O30.0253 (15)0.0189 (14)0.0349 (16)−0.0018 (13)0.0067 (12)0.0007 (13)
O40.0344 (17)0.0263 (16)0.0359 (16)−0.0089 (14)0.0091 (13)0.0022 (14)
N10.0215 (17)0.0192 (17)0.0275 (18)0.0024 (14)0.0017 (14)−0.0023 (15)
C10.027 (2)0.018 (2)0.031 (2)0.0018 (17)0.0092 (17)−0.0050 (17)
C20.034 (2)0.018 (2)0.039 (2)0.0029 (18)0.0049 (19)−0.0017 (19)
C30.037 (2)0.023 (2)0.035 (2)−0.0045 (18)0.0101 (19)−0.0047 (19)
C40.026 (2)0.020 (2)0.034 (2)−0.0009 (17)0.0064 (17)−0.0039 (18)
C50.023 (2)0.0157 (19)0.029 (2)−0.0012 (16)0.0028 (16)0.0015 (16)
C60.024 (2)0.021 (2)0.030 (2)−0.0009 (17)0.0057 (16)−0.0024 (17)
C70.028 (2)0.022 (2)0.030 (2)−0.0006 (18)0.0099 (19)−0.0045 (18)
C80.031 (2)0.019 (2)0.028 (2)−0.0005 (17)0.0056 (17)−0.0007 (18)
C90.0238 (19)0.0187 (19)0.027 (2)−0.0022 (17)0.0049 (17)−0.0039 (16)
C100.031 (2)0.020 (2)0.025 (2)−0.0038 (18)0.0024 (17)−0.0047 (17)
O1—C51.359 (5)C3—H3B0.98
O1—C11.484 (5)C3—H3C0.98
O2—C51.215 (5)C4—H4A0.98
O3—C101.377 (5)C4—H4B0.98
O3—C71.475 (5)C4—H4C0.98
O4—C101.196 (5)C6—C71.526 (6)
N1—C51.353 (5)C6—H6A0.99
N1—C91.478 (5)C6—H6B0.99
N1—C61.481 (5)C7—C81.529 (6)
C1—C41.516 (5)C7—H71
C1—C31.516 (6)C8—C91.528 (6)
C1—C21.524 (6)C8—H8A0.99
C2—H2A0.98C8—H8B0.99
C2—H2B0.98C9—C101.528 (6)
C2—H2C0.98C9—H91
C3—H3A0.98
C5—O1—C1120.7 (3)O2—C5—O1126.3 (4)
C10—O3—C7106.3 (3)N1—C5—O1109.0 (3)
C5—N1—C9122.1 (3)N1—C6—C799.4 (3)
C5—N1—C6127.1 (3)N1—C6—H6A111.9
C9—N1—C6108.3 (3)C7—C6—H6A111.9
O1—C1—C4101.8 (3)N1—C6—H6B111.9
O1—C1—C3110.0 (3)C7—C6—H6B111.9
C4—C1—C3111.5 (4)H6A—C6—H6B109.6
O1—C1—C2110.3 (3)O3—C7—C6106.4 (3)
C4—C1—C2110.7 (3)O3—C7—C8102.2 (3)
C3—C1—C2112.0 (3)C6—C7—C8102.7 (3)
C1—C2—H2A109.5O3—C7—H7114.7
C1—C2—H2B109.5C6—C7—H7114.7
H2A—C2—H2B109.5C8—C7—H7114.7
C1—C2—H2C109.5C9—C8—C791.9 (3)
H2A—C2—H2C109.5C9—C8—H8A113.3
H2B—C2—H2C109.5C7—C8—H8A113.3
C1—C3—H3A109.5C9—C8—H8B113.3
C1—C3—H3B109.5C7—C8—H8B113.3
H3A—C3—H3B109.5H8A—C8—H8B110.6
C1—C3—H3C109.5N1—C9—C10103.9 (3)
H3A—C3—H3C109.5N1—C9—C8100.6 (3)
H3B—C3—H3C109.5C10—C9—C8100.1 (3)
C1—C4—H4A109.5N1—C9—H9116.5
C1—C4—H4B109.5C10—C9—H9116.5
H4A—C4—H4B109.5C8—C9—H9116.5
C1—C4—H4C109.5O4—C10—O3122.4 (4)
H4A—C4—H4C109.5O4—C10—C9132.2 (4)
H4B—C4—H4C109.5O3—C10—C9105.4 (3)
O2—C5—N1124.7 (4)
C5—O1—C1—C4−178.9 (3)O3—C7—C8—C953.1 (3)
C5—O1—C1—C362.7 (5)C6—C7—C8—C9−57.1 (3)
C5—O1—C1—C2−61.3 (4)C5—N1—C9—C10−93.9 (4)
C9—N1—C5—O2−9.6 (6)C6—N1—C9—C1069.1 (4)
C6—N1—C5—O2−169.3 (4)C5—N1—C9—C8162.7 (3)
C9—N1—C5—O1171.3 (3)C6—N1—C9—C8−34.2 (4)
C6—N1—C5—O111.6 (5)C7—C8—C9—N153.9 (3)
C1—O1—C5—O20.9 (6)C7—C8—C9—C10−52.5 (3)
C1—O1—C5—N1179.9 (3)C7—O3—C10—O4−178.8 (4)
C5—N1—C6—C7159.9 (4)C7—O3—C10—C9−1.3 (4)
C9—N1—C6—C7−2.1 (4)N1—C9—C10—O4109.5 (5)
C10—O3—C7—C673.2 (4)C8—C9—C10—O4−146.8 (4)
C10—O3—C7—C8−34.2 (4)N1—C9—C10—O3−67.7 (3)
N1—C6—C7—O3−69.0 (4)C8—C9—C10—O336.1 (4)
N1—C6—C7—C838.0 (4)
  4 in total

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Authors:  Frank H Allen
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3.  Short, highly efficient syntheses of protected 3-azido- and 4-azidoproline and their precursors.

Authors:  J A Gómez-Vidal; R B Silverman
Journal:  Org Lett       Date:  2001-08-09       Impact factor: 6.005

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