| Literature DB >> 21201156 |
B Ravindran Durai Nayagam, Samuel Robinson Jebas, H Johnson Jeyakumar, Dieter Schollmeyer.
Abstract
In the title compound, C(15)H(17)NOS·H(2)O, the benzene and pyridine rings form a dihedral angle of 71.18 (2)°. The intra-molecular S⋯O distance [2.737 (3) Å] is shorter than expected and, in terms of hybridization principles, the N-C-S angle [114.1 (2)°] is smaller than expected. The crystal structure is stabilized by inter-molecular O-H⋯O and weak C-H⋯O hydrogen bonds. In addition, weak π-π stacking inter-actions with a centroid-centroid distance of 3.778 (3) Å are also observed.Entities:
Year: 2008 PMID: 21201156 PMCID: PMC2959397 DOI: 10.1107/S1600536808029255
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C15H17NOS·H2O | |
| Monoclinic, | Cu |
| Hall symbol: -P 2ybc | Cell parameters from 25 reflections |
| θ = 36–50° | |
| µ = 2.01 mm−1 | |
| β = 106.40 (2)° | Plate, colourless |
| 0.50 × 0.20 × 0.05 mm | |
| Enraf–Nonius CAD-4 diffractometer | 2048 reflections with |
| Radiation source: rotating anode | |
| graphite | θmax = 70.0°, θmin = 3.7° |
| ω/2θ scans | |
| Absorption correction: ψ scan (CORINC; Dräger & Gattow, 1971) | |
| 2896 measured reflections | 3 standard reflections every 60 min |
| 2684 independent reflections | intensity decay: 3% |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 2684 reflections | (Δ/σ)max < 0.001 |
| 175 parameters | Δρmax = 0.58 e Å−3 |
| 0 restraints | Δρmin = −0.79 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| C1 | 0.0724 (3) | −0.0867 (2) | 0.3741 (4) | 0.0305 (7) | |
| C2 | 0.0757 (3) | −0.1748 (2) | 0.4252 (4) | 0.0336 (7) | |
| C3 | −0.0205 (3) | −0.2249 (2) | 0.3573 (4) | 0.0375 (8) | |
| H3 | −0.0199 | −0.2837 | 0.3946 | 0.045* | |
| C4 | −0.1170 (3) | −0.1924 (2) | 0.2377 (4) | 0.0376 (8) | |
| C5 | −0.1186 (3) | −0.1053 (2) | 0.1862 (4) | 0.0355 (7) | |
| H5 | −0.1844 | −0.0818 | 0.1045 | 0.043* | |
| C6 | −0.0247 (3) | −0.05268 (19) | 0.2537 (4) | 0.0314 (7) | |
| C7 | 0.1771 (3) | −0.2149 (2) | 0.5531 (5) | 0.0469 (9) | |
| H7A | 0.1954 | −0.1835 | 0.6678 | 0.070* | |
| H7B | 0.2411 | −0.2117 | 0.5022 | 0.070* | |
| H7C | 0.1612 | −0.2758 | 0.5733 | 0.070* | |
| C8 | −0.2178 (4) | −0.2507 (3) | 0.1647 (6) | 0.0561 (11) | |
| H8A | −0.2837 | −0.2153 | 0.1054 | 0.084* | |
| H8B | −0.2332 | −0.2833 | 0.2637 | 0.084* | |
| H8C | −0.2020 | −0.2913 | 0.0775 | 0.084* | |
| C9 | −0.0327 (3) | 0.0412 (2) | 0.1961 (5) | 0.0379 (8) | |
| H9A | 0.0247 | 0.0534 | 0.1341 | 0.057* | |
| H9B | −0.0202 | 0.0786 | 0.3022 | 0.057* | |
| H9C | −0.1078 | 0.0526 | 0.1144 | 0.057* | |
| C10 | 0.1718 (3) | −0.0290 (2) | 0.4538 (4) | 0.0354 (7) | |
| H10A | 0.2203 | −0.0556 | 0.5653 | 0.042* | |
| H10B | 0.1454 | 0.0280 | 0.4850 | 0.042* | |
| S11 | 0.25245 (7) | −0.01425 (5) | 0.29196 (10) | 0.0343 (3) | |
| C12 | 0.3569 (3) | 0.05537 (19) | 0.4133 (4) | 0.0300 (7) | |
| C13 | 0.3783 (3) | 0.0803 (2) | 0.5928 (4) | 0.0364 (7) | |
| H13 | 0.3343 | 0.0567 | 0.6640 | 0.044* | |
| C14 | 0.4623 (3) | 0.1386 (2) | 0.6672 (5) | 0.0454 (9) | |
| H14 | 0.4765 | 0.1552 | 0.7897 | 0.054* | |
| C15 | 0.5265 (3) | 0.1733 (2) | 0.5633 (6) | 0.0487 (9) | |
| H15 | 0.5839 | 0.2147 | 0.6128 | 0.058* | |
| C16 | 0.5057 (3) | 0.1469 (2) | 0.3886 (6) | 0.0446 (9) | |
| H16 | 0.5501 | 0.1697 | 0.3171 | 0.053* | |
| N17 | 0.4236 (2) | 0.08942 (17) | 0.3157 (4) | 0.0336 (6) | |
| O18 | 0.4037 (2) | 0.06592 (17) | 0.1461 (3) | 0.0446 (6) | |
| O1W | 0.6227 (3) | 0.0815 (2) | 0.0886 (4) | 0.0610 (8) | |
| H1W | 0.5575 | 0.0690 | 0.0933 | 0.091* | |
| H2W | 0.6495 | 0.0394 | 0.0452 | 0.091* |
| C1 | 0.0458 (18) | 0.0265 (14) | 0.0256 (14) | −0.0078 (13) | 0.0208 (14) | −0.0057 (11) |
| C2 | 0.0497 (19) | 0.0286 (16) | 0.0288 (15) | −0.0017 (14) | 0.0214 (14) | −0.0011 (13) |
| C3 | 0.057 (2) | 0.0265 (15) | 0.0356 (17) | −0.0102 (14) | 0.0246 (16) | −0.0070 (13) |
| C4 | 0.0480 (19) | 0.0392 (17) | 0.0332 (16) | −0.0162 (15) | 0.0239 (15) | −0.0141 (14) |
| C5 | 0.0420 (18) | 0.0388 (18) | 0.0300 (16) | −0.0035 (14) | 0.0171 (14) | −0.0055 (13) |
| C6 | 0.0492 (19) | 0.0263 (15) | 0.0255 (14) | −0.0026 (13) | 0.0217 (14) | −0.0050 (12) |
| C7 | 0.058 (2) | 0.0377 (19) | 0.048 (2) | 0.0032 (17) | 0.0194 (18) | 0.0037 (16) |
| C8 | 0.062 (3) | 0.058 (2) | 0.055 (2) | −0.030 (2) | 0.027 (2) | −0.020 (2) |
| C9 | 0.060 (2) | 0.0264 (16) | 0.0334 (16) | 0.0007 (14) | 0.0230 (16) | −0.0007 (12) |
| C10 | 0.0476 (19) | 0.0363 (16) | 0.0261 (15) | −0.0109 (14) | 0.0167 (14) | −0.0030 (13) |
| S11 | 0.0424 (5) | 0.0364 (5) | 0.0281 (4) | −0.0087 (3) | 0.0164 (3) | −0.0048 (3) |
| C12 | 0.0309 (15) | 0.0228 (14) | 0.0361 (16) | 0.0022 (12) | 0.0091 (13) | 0.0048 (12) |
| C13 | 0.0443 (18) | 0.0318 (16) | 0.0312 (16) | 0.0004 (14) | 0.0075 (14) | 0.0038 (13) |
| C14 | 0.046 (2) | 0.0403 (19) | 0.045 (2) | 0.0026 (16) | 0.0045 (17) | −0.0067 (16) |
| C15 | 0.0396 (19) | 0.039 (2) | 0.068 (3) | −0.0066 (15) | 0.0159 (18) | −0.0110 (18) |
| C16 | 0.0367 (18) | 0.0357 (18) | 0.066 (2) | −0.0061 (15) | 0.0230 (18) | −0.0009 (17) |
| N17 | 0.0343 (14) | 0.0293 (13) | 0.0402 (15) | 0.0044 (11) | 0.0154 (12) | 0.0042 (11) |
| O18 | 0.0475 (15) | 0.0501 (15) | 0.0417 (14) | −0.0042 (11) | 0.0213 (12) | 0.0012 (11) |
| O1W | 0.0589 (18) | 0.085 (2) | 0.0441 (15) | −0.0134 (16) | 0.0233 (14) | −0.0132 (15) |
| C1—C6 | 1.397 (5) | C9—H9B | 0.9800 |
| C1—C2 | 1.411 (4) | C9—H9C | 0.9800 |
| C1—C10 | 1.500 (4) | C10—S11 | 1.823 (3) |
| C2—C3 | 1.390 (5) | C10—H10A | 0.9900 |
| C2—C7 | 1.494 (5) | C10—H10B | 0.9900 |
| C3—C4 | 1.381 (5) | S11—C12 | 1.736 (3) |
| C3—H3 | 0.9500 | C12—N17 | 1.371 (4) |
| C4—C5 | 1.399 (5) | C12—C13 | 1.394 (4) |
| C4—C8 | 1.509 (5) | C13—C14 | 1.371 (5) |
| C5—C6 | 1.391 (5) | C13—H13 | 0.9500 |
| C5—H5 | 0.9500 | C14—C15 | 1.388 (6) |
| C6—C9 | 1.509 (4) | C14—H14 | 0.9500 |
| C7—H7A | 0.9800 | C15—C16 | 1.367 (6) |
| C7—H7B | 0.9800 | C15—H15 | 0.9500 |
| C7—H7C | 0.9800 | C16—N17 | 1.345 (4) |
| C8—H8A | 0.9800 | C16—H16 | 0.9500 |
| C8—H8B | 0.9800 | N17—O18 | 1.318 (4) |
| C8—H8C | 0.9800 | O1W—H1W | 0.8400 |
| C9—H9A | 0.9800 | O1W—H2W | 0.8400 |
| C6—C1—C2 | 120.0 (3) | C6—C9—H9B | 109.5 |
| C6—C1—C10 | 120.1 (3) | H9A—C9—H9B | 109.5 |
| C2—C1—C10 | 119.9 (3) | C6—C9—H9C | 109.5 |
| C3—C2—C1 | 118.3 (3) | H9A—C9—H9C | 109.5 |
| C3—C2—C7 | 119.3 (3) | H9B—C9—H9C | 109.5 |
| C1—C2—C7 | 122.4 (3) | C1—C10—S11 | 109.5 (2) |
| C4—C3—C2 | 122.5 (3) | C1—C10—H10A | 109.8 |
| C4—C3—H3 | 118.7 | S11—C10—H10A | 109.8 |
| C2—C3—H3 | 118.7 | C1—C10—H10B | 109.8 |
| C3—C4—C5 | 118.6 (3) | S11—C10—H10B | 109.8 |
| C3—C4—C8 | 120.1 (3) | H10A—C10—H10B | 108.2 |
| C5—C4—C8 | 121.3 (4) | C12—S11—C10 | 99.89 (16) |
| C6—C5—C4 | 120.6 (3) | N17—C12—C13 | 118.1 (3) |
| C6—C5—H5 | 119.7 | N17—C12—S11 | 114.1 (2) |
| C4—C5—H5 | 119.7 | C13—C12—S11 | 127.8 (3) |
| C5—C6—C1 | 120.0 (3) | C14—C13—C12 | 120.5 (3) |
| C5—C6—C9 | 118.0 (3) | C14—C13—H13 | 119.7 |
| C1—C6—C9 | 122.0 (3) | C12—C13—H13 | 119.7 |
| C2—C7—H7A | 109.5 | C13—C14—C15 | 119.9 (4) |
| C2—C7—H7B | 109.5 | C13—C14—H14 | 120.1 |
| H7A—C7—H7B | 109.5 | C15—C14—H14 | 120.1 |
| C2—C7—H7C | 109.5 | C16—C15—C14 | 118.8 (3) |
| H7A—C7—H7C | 109.5 | C16—C15—H15 | 120.6 |
| H7B—C7—H7C | 109.5 | C14—C15—H15 | 120.6 |
| C4—C8—H8A | 109.5 | N17—C16—C15 | 121.4 (3) |
| C4—C8—H8B | 109.5 | N17—C16—H16 | 119.3 |
| H8A—C8—H8B | 109.5 | C15—C16—H16 | 119.3 |
| C4—C8—H8C | 109.5 | O18—N17—C16 | 120.4 (3) |
| H8A—C8—H8C | 109.5 | O18—N17—C12 | 118.2 (3) |
| H8B—C8—H8C | 109.5 | C16—N17—C12 | 121.3 (3) |
| C6—C9—H9A | 109.5 | H1W—O1W—H2W | 109.5 |
| C6—C1—C2—C3 | −2.0 (4) | C6—C1—C10—S11 | −80.1 (3) |
| C10—C1—C2—C3 | 176.0 (3) | C2—C1—C10—S11 | 101.9 (3) |
| C6—C1—C2—C7 | 179.9 (3) | C1—C10—S11—C12 | 178.5 (2) |
| C10—C1—C2—C7 | −2.1 (5) | C10—S11—C12—N17 | −170.9 (2) |
| C1—C2—C3—C4 | 2.3 (5) | C10—S11—C12—C13 | 8.2 (3) |
| C7—C2—C3—C4 | −179.6 (3) | N17—C12—C13—C14 | 1.3 (5) |
| C2—C3—C4—C5 | −1.5 (5) | S11—C12—C13—C14 | −177.7 (3) |
| C2—C3—C4—C8 | 178.3 (3) | C12—C13—C14—C15 | 0.2 (5) |
| C3—C4—C5—C6 | 0.3 (5) | C13—C14—C15—C16 | −1.3 (6) |
| C8—C4—C5—C6 | −179.5 (3) | C14—C15—C16—N17 | 1.0 (6) |
| C4—C5—C6—C1 | 0.0 (4) | C15—C16—N17—O18 | 178.9 (3) |
| C4—C5—C6—C9 | −178.7 (3) | C15—C16—N17—C12 | 0.5 (5) |
| C2—C1—C6—C5 | 0.9 (4) | C13—C12—N17—O18 | 179.9 (3) |
| C10—C1—C6—C5 | −177.1 (3) | S11—C12—N17—O18 | −0.9 (4) |
| C2—C1—C6—C9 | 179.5 (3) | C13—C12—N17—C16 | −1.7 (5) |
| C10—C1—C6—C9 | 1.5 (4) | S11—C12—N17—C16 | 177.5 (3) |
| H··· | ||||
| O1W—H1W···O18 | 0.84 | 2.05 | 2.875 (4) | 165. |
| O1W—H2W···O18i | 0.84 | 2.17 | 2.869 (4) | 141. |
| C16—H16···O1W | 0.95 | 2.58 | 3.226 (6) | 125 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O1 | 0.84 | 2.05 | 2.875 (4) | 165 |
| O1 | 0.84 | 2.17 | 2.869 (4) | 141 |
| C16—H16⋯O1 | 0.95 | 2.58 | 3.226 (6) | 125 |
Symmetry code: (i) .