Literature DB >> 21201093

N'-Prop-ylisonicotinohydrazide.

Shu-Ye Wang1, Xue-Ming Song, Li-Xiang Duan.   

Abstract

In the title compound, C(9)H(11)N(3)O, the crystal structure is stabilized by a bifurcated inter-molecular N-H⋯(N,O) hydrogen bond and a C-H⋯O inter-action, leading to chains of mol-ecules.

Entities:  

Year:  2008        PMID: 21201093      PMCID: PMC2959451          DOI: 10.1107/S1600536808027955

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background on the medicinal uses of isoniazid (isonicotinic acid hydrazide, INH) and INH hydrazide–hydrazones, see: Fox & Mitchison (1975 ▶); Kucukguzel et al. (2003 ▶). For the synthesis, see: Deng et al. (2005 ▶). For bond-length data, see: Allen et al. (1987 ▶).

Experimental

Crystal data

C9H11N3O M = 177.21 Orthorhombic, a = 13.010 (3) Å b = 17.590 (4) Å c = 8.0000 (16) Å V = 1830.8 (6) Å3 Z = 8 Mo Kα radiation μ = 0.09 mm−1 T = 297 (2) K 0.43 × 0.28 × 0.22 mm

Data collection

Bruker APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2001 ▶) T min = 0.963, T max = 0.981 9110 measured reflections 1634 independent reflections 986 reflections with I > 2σ(I) R int = 0.062

Refinement

R[F 2 > 2σ(F 2)] = 0.047 wR(F 2) = 0.145 S = 1.00 1634 reflections 125 parameters 1 restraint H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.17 e Å−3 Δρmin = −0.14 e Å−3 Data collection: APEX2 (Bruker, 2004 ▶); cell refinement: SAINT-Plus (Bruker, 2001 ▶); data reduction: SAINT-Plus; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536808027955/hb2787sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808027955/hb2787Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C9H11N3OF(000) = 752
Mr = 177.21Dx = 1.286 Mg m3
Orthorhombic, PccnMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ab 2acCell parameters from 1634 reflections
a = 13.010 (3) Åθ = 2.0–25.1°
b = 17.590 (4) ŵ = 0.09 mm1
c = 8.0000 (16) ÅT = 297 K
V = 1830.8 (6) Å3Block, yellow
Z = 80.43 × 0.28 × 0.22 mm
Bruker APEXII CCD diffractometer1634 independent reflections
Radiation source: fine-focus sealed tube986 reflections with I > 2σ(I)
graphiteRint = 0.062
φ and ω scansθmax = 25.1°, θmin = 2.0°
Absorption correction: multi-scan (SADABS; Bruker, 2001)h = −15→15
Tmin = 0.963, Tmax = 0.981k = −19→20
9110 measured reflectionsl = −6→9
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.047Hydrogen site location: difmap (N-H) and geom (C-H)
wR(F2) = 0.145H atoms treated by a mixture of independent and constrained refinement
S = 1.00w = 1/[σ2(Fo2) + (0.070P)2 + 0.2547P] where P = (Fo2 + 2Fc2)/3
1634 reflections(Δ/σ)max < 0.001
125 parametersΔρmax = 0.18 e Å3
1 restraintΔρmin = −0.14 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.5785 (2)0.3888 (2)0.6946 (4)0.0774 (9)
H10.55090.40370.79670.093*
C20.6065 (2)0.44485 (16)0.5836 (3)0.0615 (7)
H20.59750.49590.61020.074*
C30.64780 (16)0.42398 (14)0.4339 (3)0.0475 (6)
C40.65648 (19)0.34815 (15)0.4012 (3)0.0599 (7)
H40.68250.33170.29920.072*
C50.6266 (2)0.29651 (16)0.5193 (4)0.0699 (8)
H50.63380.24510.49450.084*
C60.67852 (18)0.48038 (13)0.3061 (3)0.0493 (6)
C70.84373 (18)0.63336 (14)0.2827 (3)0.0494 (6)
C80.8682 (2)0.69467 (16)0.1616 (4)0.0771 (9)
H8A0.81880.69410.07250.116*
H8B0.93580.68660.11680.116*
H8C0.86590.74300.21740.116*
C90.91433 (19)0.62320 (16)0.4257 (3)0.0620 (8)
H9A0.87510.61650.52630.093*
H9B0.95730.66730.43650.093*
H9C0.95650.57920.40730.093*
N10.58839 (18)0.31505 (15)0.6654 (3)0.0767 (8)
N20.73950 (15)0.53574 (12)0.3610 (2)0.0517 (6)
N30.76506 (16)0.59328 (11)0.2493 (2)0.0544 (6)
O10.64977 (13)0.47481 (10)0.1615 (2)0.0676 (6)
H2A0.7650 (17)0.5349 (14)0.4690 (16)0.072 (8)*
U11U22U33U12U13U23
C10.092 (2)0.087 (2)0.0534 (18)−0.0139 (18)0.0222 (15)0.0038 (16)
C20.0764 (18)0.0595 (17)0.0486 (16)−0.0105 (14)0.0130 (13)0.0062 (13)
C30.0441 (14)0.0593 (17)0.0391 (13)−0.0091 (11)−0.0025 (11)0.0023 (11)
C40.0596 (17)0.0651 (19)0.0552 (17)−0.0069 (14)0.0043 (12)−0.0020 (14)
C50.0658 (18)0.0616 (18)0.082 (2)−0.0076 (14)−0.0046 (16)0.0095 (16)
C60.0495 (14)0.0609 (16)0.0375 (14)−0.0071 (12)−0.0004 (11)0.0039 (12)
C70.0465 (14)0.0565 (16)0.0453 (14)−0.0012 (12)0.0043 (11)0.0032 (11)
C80.0697 (18)0.078 (2)0.084 (2)−0.0169 (16)0.0030 (16)0.0294 (16)
C90.0562 (15)0.0726 (18)0.0574 (17)−0.0112 (13)−0.0062 (13)0.0025 (13)
N10.0825 (17)0.078 (2)0.0697 (18)−0.0147 (14)0.0044 (13)0.0211 (14)
N20.0602 (13)0.0628 (14)0.0321 (11)−0.0156 (11)−0.0034 (9)0.0091 (10)
N30.0579 (13)0.0647 (14)0.0406 (12)−0.0108 (11)−0.0030 (9)0.0147 (10)
O10.0759 (13)0.0883 (14)0.0387 (10)−0.0241 (10)−0.0097 (8)0.0064 (9)
C1—N11.324 (4)C6—N21.331 (3)
C1—C21.376 (4)C7—N31.271 (3)
C1—H10.9300C7—C81.484 (3)
C2—C31.363 (3)C7—C91.478 (3)
C2—H20.9300C8—H8A0.9600
C3—C41.364 (3)C8—H8B0.9600
C3—C61.480 (3)C8—H8C0.9600
C4—C51.367 (4)C9—H9A0.9600
C4—H40.9300C9—H9B0.9600
C5—N11.312 (4)C9—H9C0.9600
C5—H50.9300N2—N31.391 (2)
C6—O11.220 (3)N2—H2A0.926 (10)
N1—C1—C2124.2 (3)N3—C7—C9126.6 (2)
N1—C1—H1117.9C8—C7—C9117.4 (2)
C2—C1—H1117.9C7—C8—H8A109.5
C3—C2—C1118.6 (3)C7—C8—H8B109.5
C3—C2—H2120.7H8A—C8—H8B109.5
C1—C2—H2120.7C7—C8—H8C109.5
C4—C3—C2117.7 (2)H8A—C8—H8C109.5
C4—C3—C6120.0 (2)H8B—C8—H8C109.5
C2—C3—C6122.2 (2)C7—C9—H9A109.5
C5—C4—C3119.6 (3)C7—C9—H9B109.5
C5—C4—H4120.2H9A—C9—H9B109.5
C3—C4—H4120.2C7—C9—H9C109.5
N1—C5—C4124.0 (3)H9A—C9—H9C109.5
N1—C5—H5118.0H9B—C9—H9C109.5
C4—C5—H5118.0C5—N1—C1116.0 (2)
O1—C6—N2123.7 (2)C6—N2—N3117.57 (19)
O1—C6—C3121.2 (2)C6—N2—H2A120.6 (15)
N2—C6—C3115.1 (2)N3—N2—H2A121.8 (15)
N3—C7—C8116.0 (2)C7—N3—N2117.42 (19)
D—H···AD—HH···AD···AD—H···A
N2—H2A···O1i0.93 (2)2.17 (2)3.001 (3)149 (2)
N2—H2A···N3i0.93 (2)2.50 (2)3.268 (2)141.(2)
C9—H9A···N3i0.962.583.525 (3)167
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N2—H2A⋯O1i0.926 (15)2.172 (19)3.001 (3)149 (2)
N2—H2A⋯N3i0.926 (15)2.497 (16)3.268 (2)140.9 (19)
C9—H9A⋯N3i0.962.583.525 (3)167

Symmetry code: (i) .

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