| Literature DB >> 21201048 |
Feigang He, Yun Xi, Jun Li, Fengxing Zhang.
Abstract
In the crystal structure of the title compound, [Co(C(13)H(9)N(2)O)(2)]·2C(3)H(7)NO, the Co(II) ion is four-coordinated by two N atoms and two O atoms from two deprotonated 2-(1H-benzimidazol-2-yl)phenol ligands in a distorted tetra-hedral geometry. The dimethyl-formamide solvent mol-ecules are found inside a two-dimensional network structure formed by inter-molecular N-H⋯O hydrogen bonds linking the mol-ecules.Entities:
Year: 2008 PMID: 21201048 PMCID: PMC2959248 DOI: 10.1107/S1600536808029620
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Co(C13H9N2O)2]·2C3H7NO | |
| Mo | |
| Orthorhombic, | Cell parameters from 4622 reflections |
| θ = 3.0–22.7° | |
| µ = 0.62 mm−1 | |
| Flake, pink | |
| 0.34 × 0.28 × 0.09 mm | |
| Bruker SMART CCD area-detector diffractometer | 3157 independent reflections |
| Radiation source: fine-focus sealed tube | 2167 reflections with |
| graphite | |
| ω scans | θmax = 26.9°, θmin = 2.3° |
| Absorption correction: multi-scan (ABSCOR; Higashi, 1995) | |
| 12837 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 3157 reflections | (Δ/σ)max = 0.011 |
| 197 parameters | Δρmax = 0.24 e Å−3 |
| 0 restraints | Δρmin = −0.34 e Å−3 |
| Experimental. ABSCOR BY T.Higashi 8 march,1995 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Co1 | 0.5000 | 0.02008 (5) | 0.2500 | 0.03984 (15) | |
| O1 | 0.40147 (10) | −0.07066 (19) | 0.28840 (6) | 0.0548 (4) | |
| O2 | 0.48308 (13) | 0.3080 (2) | 0.53185 (8) | 0.0767 (6) | |
| N1 | 0.53688 (11) | 0.12752 (19) | 0.32438 (7) | 0.0382 (4) | |
| N2 | 0.53681 (11) | 0.2071 (2) | 0.41924 (7) | 0.0414 (4) | |
| H2A | 0.5210 | 0.2194 | 0.4561 | 0.050* | |
| N3 | 0.51069 (13) | 0.3913 (2) | 0.62601 (8) | 0.0522 (5) | |
| C1 | 0.60775 (12) | 0.2234 (2) | 0.33281 (9) | 0.0371 (5) | |
| C2 | 0.67200 (14) | 0.2690 (2) | 0.29255 (10) | 0.0473 (5) | |
| H2 | 0.6718 | 0.2360 | 0.2526 | 0.057* | |
| C3 | 0.73595 (15) | 0.3649 (3) | 0.31418 (11) | 0.0548 (6) | |
| H3 | 0.7797 | 0.3977 | 0.2883 | 0.066* | |
| C4 | 0.73617 (16) | 0.4136 (3) | 0.37414 (11) | 0.0588 (7) | |
| H4 | 0.7803 | 0.4781 | 0.3873 | 0.071* | |
| C5 | 0.67330 (16) | 0.3694 (3) | 0.41443 (10) | 0.0542 (6) | |
| H5 | 0.6740 | 0.4019 | 0.4544 | 0.065* | |
| C6 | 0.60842 (13) | 0.2734 (2) | 0.39230 (9) | 0.0396 (5) | |
| C7 | 0.49560 (13) | 0.1191 (2) | 0.37745 (8) | 0.0343 (4) | |
| C8 | 0.41866 (13) | 0.0275 (2) | 0.39038 (9) | 0.0374 (5) | |
| C9 | 0.38635 (14) | 0.0222 (2) | 0.44962 (10) | 0.0449 (5) | |
| H9 | 0.4138 | 0.0795 | 0.4794 | 0.054* | |
| C10 | 0.31575 (15) | −0.0646 (3) | 0.46486 (11) | 0.0534 (6) | |
| H10 | 0.2960 | −0.0666 | 0.5045 | 0.064* | |
| C11 | 0.27404 (15) | −0.1491 (3) | 0.42092 (11) | 0.0568 (6) | |
| H11 | 0.2257 | −0.2076 | 0.4310 | 0.068* | |
| C12 | 0.30338 (15) | −0.1473 (3) | 0.36265 (11) | 0.0542 (6) | |
| H12 | 0.2741 | −0.2045 | 0.3337 | 0.065* | |
| C13 | 0.37675 (13) | −0.0612 (3) | 0.34506 (9) | 0.0424 (5) | |
| C14 | 0.52757 (18) | 0.3784 (3) | 0.56829 (12) | 0.0634 (7) | |
| H14 | 0.5772 | 0.4264 | 0.5539 | 0.076* | |
| C15 | 0.5674 (2) | 0.4749 (3) | 0.66682 (14) | 0.0821 (9) | |
| H15A | 0.5929 | 0.4045 | 0.6951 | 0.123* | |
| H15B | 0.5344 | 0.5508 | 0.6883 | 0.123* | |
| H15C | 0.6123 | 0.5245 | 0.6441 | 0.123* | |
| C16 | 0.43673 (18) | 0.3165 (3) | 0.65240 (12) | 0.0732 (8) | |
| H16A | 0.4056 | 0.2617 | 0.6217 | 0.110* | |
| H16B | 0.3995 | 0.3921 | 0.6703 | 0.110* | |
| H16C | 0.4557 | 0.2457 | 0.6829 | 0.110* |
| Co1 | 0.0411 (3) | 0.0512 (3) | 0.0272 (2) | 0.000 | −0.00169 (17) | 0.000 |
| O1 | 0.0521 (10) | 0.0778 (11) | 0.0346 (8) | −0.0211 (8) | −0.0020 (7) | −0.0004 (8) |
| O2 | 0.0896 (14) | 0.0933 (14) | 0.0471 (11) | 0.0015 (11) | 0.0029 (10) | −0.0212 (10) |
| N1 | 0.0390 (10) | 0.0456 (10) | 0.0300 (9) | −0.0014 (8) | 0.0011 (7) | 0.0010 (7) |
| N2 | 0.0454 (10) | 0.0508 (11) | 0.0279 (9) | −0.0063 (8) | 0.0026 (7) | −0.0028 (8) |
| N3 | 0.0615 (13) | 0.0562 (12) | 0.0388 (11) | 0.0040 (10) | 0.0039 (9) | −0.0020 (9) |
| C1 | 0.0357 (11) | 0.0411 (11) | 0.0346 (10) | 0.0010 (9) | −0.0002 (9) | 0.0021 (9) |
| C2 | 0.0478 (13) | 0.0568 (14) | 0.0374 (11) | −0.0011 (11) | 0.0071 (10) | 0.0027 (10) |
| C3 | 0.0463 (14) | 0.0619 (15) | 0.0561 (15) | −0.0103 (11) | 0.0105 (11) | 0.0023 (12) |
| C4 | 0.0506 (15) | 0.0655 (16) | 0.0604 (16) | −0.0200 (12) | −0.0003 (12) | −0.0033 (12) |
| C5 | 0.0577 (15) | 0.0608 (15) | 0.0440 (13) | −0.0130 (12) | −0.0006 (11) | −0.0083 (11) |
| C6 | 0.0390 (12) | 0.0444 (12) | 0.0355 (10) | −0.0025 (9) | 0.0018 (9) | 0.0016 (9) |
| C7 | 0.0379 (11) | 0.0382 (11) | 0.0269 (10) | 0.0034 (9) | −0.0016 (9) | 0.0019 (8) |
| C8 | 0.0351 (11) | 0.0424 (12) | 0.0348 (11) | 0.0023 (9) | 0.0000 (9) | 0.0058 (9) |
| C9 | 0.0490 (14) | 0.0492 (13) | 0.0366 (12) | 0.0030 (10) | 0.0051 (10) | −0.0004 (10) |
| C10 | 0.0519 (14) | 0.0624 (15) | 0.0458 (13) | 0.0038 (12) | 0.0155 (11) | 0.0097 (12) |
| C11 | 0.0433 (14) | 0.0650 (16) | 0.0620 (17) | −0.0087 (12) | 0.0073 (12) | 0.0149 (13) |
| C12 | 0.0443 (13) | 0.0664 (16) | 0.0521 (14) | −0.0113 (11) | −0.0065 (11) | 0.0046 (12) |
| C13 | 0.0358 (12) | 0.0517 (13) | 0.0395 (12) | −0.0022 (10) | −0.0032 (9) | 0.0091 (10) |
| C14 | 0.0687 (17) | 0.0705 (18) | 0.0510 (16) | 0.0073 (14) | 0.0124 (13) | 0.0001 (14) |
| C15 | 0.094 (2) | 0.083 (2) | 0.0694 (19) | 0.0018 (17) | −0.0113 (17) | −0.0150 (16) |
| C16 | 0.077 (2) | 0.0775 (19) | 0.0646 (17) | 0.0041 (15) | 0.0186 (15) | 0.0129 (15) |
| Co1—O1 | 1.9135 (15) | C4—H4 | 0.9300 |
| Co1—O1i | 1.9135 (15) | C5—C6 | 1.394 (3) |
| Co1—N1 | 1.9784 (16) | C5—H5 | 0.9300 |
| Co1—N1i | 1.9784 (16) | C7—C8 | 1.459 (3) |
| O1—C13 | 1.315 (2) | C8—C9 | 1.405 (3) |
| O2—C14 | 1.224 (3) | C8—C13 | 1.423 (3) |
| N1—C7 | 1.339 (2) | C9—C10 | 1.369 (3) |
| N1—C1 | 1.389 (2) | C9—H9 | 0.9300 |
| N2—C7 | 1.360 (2) | C10—C11 | 1.379 (3) |
| N2—C6 | 1.383 (2) | C10—H10 | 0.9300 |
| N2—H2A | 0.8600 | C11—C12 | 1.368 (3) |
| N3—C14 | 1.310 (3) | C11—H11 | 0.9300 |
| N3—C16 | 1.439 (3) | C12—C13 | 1.413 (3) |
| N3—C15 | 1.454 (3) | C12—H12 | 0.9300 |
| C1—C6 | 1.388 (3) | C14—H14 | 0.9300 |
| C1—C2 | 1.392 (3) | C15—H15A | 0.9600 |
| C2—C3 | 1.379 (3) | C15—H15B | 0.9600 |
| C2—H2 | 0.9300 | C15—H15C | 0.9600 |
| C3—C4 | 1.394 (3) | C16—H16A | 0.9600 |
| C3—H3 | 0.9300 | C16—H16B | 0.9600 |
| C4—C5 | 1.374 (3) | C16—H16C | 0.9600 |
| O1—Co1—O1i | 131.26 (11) | N1—C7—C8 | 126.16 (18) |
| O1—Co1—N1 | 93.07 (6) | N2—C7—C8 | 123.70 (17) |
| O1i—Co1—N1 | 109.66 (7) | C9—C8—C13 | 118.69 (19) |
| O1—Co1—N1i | 109.66 (7) | C9—C8—C7 | 119.39 (19) |
| O1i—Co1—N1i | 93.07 (6) | C13—C8—C7 | 121.88 (18) |
| N1—Co1—N1i | 123.60 (10) | C10—C9—C8 | 122.1 (2) |
| C13—O1—Co1 | 129.02 (13) | C10—C9—H9 | 118.9 |
| C7—N1—C1 | 106.85 (16) | C8—C9—H9 | 118.9 |
| C7—N1—Co1 | 124.63 (14) | C9—C10—C11 | 119.5 (2) |
| C1—N1—Co1 | 128.51 (13) | C9—C10—H10 | 120.3 |
| C7—N2—C6 | 108.38 (16) | C11—C10—H10 | 120.3 |
| C7—N2—H2A | 125.8 | C12—C11—C10 | 120.3 (2) |
| C6—N2—H2A | 125.8 | C12—C11—H11 | 119.8 |
| C14—N3—C16 | 121.1 (2) | C10—C11—H11 | 119.8 |
| C14—N3—C15 | 122.0 (2) | C11—C12—C13 | 122.1 (2) |
| C16—N3—C15 | 116.8 (2) | C11—C12—H12 | 118.9 |
| C6—C1—N1 | 108.77 (17) | C13—C12—H12 | 118.9 |
| C6—C1—C2 | 120.93 (19) | O1—C13—C12 | 117.6 (2) |
| N1—C1—C2 | 130.30 (19) | O1—C13—C8 | 125.17 (19) |
| C3—C2—C1 | 117.4 (2) | C12—C13—C8 | 117.24 (19) |
| C3—C2—H2 | 121.3 | O2—C14—N3 | 125.1 (3) |
| C1—C2—H2 | 121.3 | O2—C14—H14 | 117.5 |
| C2—C3—C4 | 121.1 (2) | N3—C14—H14 | 117.5 |
| C2—C3—H3 | 119.4 | N3—C15—H15A | 109.5 |
| C4—C3—H3 | 119.4 | N3—C15—H15B | 109.5 |
| C5—C4—C3 | 122.2 (2) | H15A—C15—H15B | 109.5 |
| C5—C4—H4 | 118.9 | N3—C15—H15C | 109.5 |
| C3—C4—H4 | 118.9 | H15A—C15—H15C | 109.5 |
| C4—C5—C6 | 116.6 (2) | H15B—C15—H15C | 109.5 |
| C4—C5—H5 | 121.7 | N3—C16—H16A | 109.5 |
| C6—C5—H5 | 121.7 | N3—C16—H16B | 109.5 |
| N2—C6—C1 | 105.86 (17) | H16A—C16—H16B | 109.5 |
| N2—C6—C5 | 132.3 (2) | N3—C16—H16C | 109.5 |
| C1—C6—C5 | 121.82 (19) | H16A—C16—H16C | 109.5 |
| N1—C7—N2 | 110.13 (17) | H16B—C16—H16C | 109.5 |
| O1i—Co1—O1—C13 | 117.1 (2) | C1—N1—C7—N2 | 0.6 (2) |
| N1—Co1—O1—C13 | −2.6 (2) | Co1—N1—C7—N2 | −179.44 (13) |
| N1i—Co1—O1—C13 | −130.02 (19) | C1—N1—C7—C8 | −178.17 (18) |
| O1—Co1—N1—C7 | 0.38 (17) | Co1—N1—C7—C8 | 1.8 (3) |
| O1i—Co1—N1—C7 | −135.71 (16) | C6—N2—C7—N1 | −0.9 (2) |
| N1i—Co1—N1—C7 | 116.49 (17) | C6—N2—C7—C8 | 177.94 (18) |
| O1—Co1—N1—C1 | −179.71 (17) | N1—C7—C8—C9 | 175.51 (19) |
| O1i—Co1—N1—C1 | 44.19 (18) | N2—C7—C8—C9 | −3.1 (3) |
| N1i—Co1—N1—C1 | −63.60 (15) | N1—C7—C8—C13 | −2.3 (3) |
| C7—N1—C1—C6 | −0.1 (2) | N2—C7—C8—C13 | 179.04 (19) |
| Co1—N1—C1—C6 | 179.93 (14) | C13—C8—C9—C10 | −0.4 (3) |
| C7—N1—C1—C2 | 179.2 (2) | C7—C8—C9—C10 | −178.3 (2) |
| Co1—N1—C1—C2 | −0.7 (3) | C8—C9—C10—C11 | −0.5 (3) |
| C6—C1—C2—C3 | 0.1 (3) | C9—C10—C11—C12 | 0.5 (4) |
| N1—C1—C2—C3 | −179.1 (2) | C10—C11—C12—C13 | 0.4 (4) |
| C1—C2—C3—C4 | 0.2 (4) | Co1—O1—C13—C12 | −176.47 (16) |
| C2—C3—C4—C5 | −0.2 (4) | Co1—O1—C13—C8 | 2.8 (3) |
| C3—C4—C5—C6 | −0.3 (4) | C11—C12—C13—O1 | 177.9 (2) |
| C7—N2—C6—C1 | 0.8 (2) | C11—C12—C13—C8 | −1.4 (3) |
| C7—N2—C6—C5 | −178.3 (2) | C9—C8—C13—O1 | −177.9 (2) |
| N1—C1—C6—N2 | −0.4 (2) | C7—C8—C13—O1 | −0.1 (3) |
| C2—C1—C6—N2 | −179.79 (19) | C9—C8—C13—C12 | 1.3 (3) |
| N1—C1—C6—C5 | 178.78 (19) | C7—C8—C13—C12 | 179.18 (19) |
| C2—C1—C6—C5 | −0.6 (3) | C16—N3—C14—O2 | 2.0 (4) |
| C4—C5—C6—N2 | 179.6 (2) | C15—N3—C14—O2 | 179.0 (3) |
| C4—C5—C6—C1 | 0.7 (3) |
| H··· | ||||
| N2—H2A···O2 | 0.86 | 1.94 | 2.772 (2) | 164. |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N2—H2 | 0.86 | 1.94 | 2.772 (2) | 164 |