Literature DB >> 21201006

Iodido(1,10-phenanthroline-κN,N')(piperine-1-carbodithioato-κS,S')copper(II).

Le-Qing Fan1.   

Abstract

In the title compound, [Cu(C(6)H(10)NS(2))I(C(12)H(8)N(2))], the Cu(II) ion is coordinated by one iodide ion, two N atoms of the phenanthroline ligand and two S atoms from the piperidyl-dithio-carbamate ligand in a distorted square-pyramidal environment.

Entities:  

Year:  2008        PMID: 21201006      PMCID: PMC2959432          DOI: 10.1107/S1600536808028213

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related literature, see: Englhardt et al. (1998 ▶); Fernández et al. (2000 ▶); Koh et al. (2003 ▶); Noro et al. (2000 ▶); Yaghi et al. (1998 ▶).

Experimental

Crystal data

[Cu(C6H10NS2)I(C12H8N2)] M = 530.91 Monoclinic, a = 6.408 (4) Å b = 17.11 (1) Å c = 18.400 (9) Å β = 108.42 (2)° V = 1914 (2) Å3 Z = 4 Mo Kα radiation μ = 2.98 mm−1 T = 293 (2) K 0.40 × 0.08 × 0.03 mm

Data collection

Rigaku Mercury CCD diffractometer Absorption correction: multi-scan (CrystalClear; Rigaku,2000 ▶) T min = 0.751, T max = 0.915 14752 measured reflections 4236 independent reflections 3298 reflections with I > 2σ(I) R int = 0.069

Refinement

R[F 2 > 2σ(F 2)] = 0.063 wR(F 2) = 0.166 S = 1.09 4236 reflections 226 parameters H-atom parameters constrained Δρmax = 1.41 e Å−3 Δρmin = −1.52 e Å−3 Data collection: CrystalClear (Rigaku, 2000 ▶); cell refinement: CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536808028213/im2082sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808028213/im2082Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Cu(C6H10NS2)I(C12H8N2)]F(000) = 1044
Mr = 530.91Dx = 1.843 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 4118 reflections
a = 6.408 (4) Åθ = 3.3–27.5°
b = 17.11 (1) ŵ = 2.98 mm1
c = 18.400 (9) ÅT = 293 K
β = 108.42 (2)°Prism, black
V = 1914 (2) Å30.40 × 0.08 × 0.03 mm
Z = 4
Rigaku Mercury CCD diffractometer4236 independent reflections
Radiation source: Sealed Tube3298 reflections with I > 2σ(I)
Graphite MonochromatorRint = 0.069
ω scansθmax = 27.5°, θmin = 2.3°
Absorption correction: multi-scan (CrystalClear; Rigaku,2000)h = −8→8
Tmin = 0.751, Tmax = 0.915k = −22→22
14752 measured reflectionsl = −23→23
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.063Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.166H-atom parameters constrained
S = 1.09w = 1/[σ2(Fo2) + (0.0831P)2 + 0.6436P] where P = (Fo2 + 2Fc2)/3
4236 reflections(Δ/σ)max < 0.001
226 parametersΔρmax = 1.41 e Å3
0 restraintsΔρmin = −1.52 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cu10.45983 (13)0.35695 (5)0.41693 (4)0.0396 (2)
I10.22830 (8)0.21581 (3)0.35611 (3)0.04846 (19)
S10.2502 (3)0.45295 (13)0.33902 (11)0.0603 (6)
S20.6695 (3)0.39466 (10)0.34223 (9)0.0399 (4)
N10.4499 (9)0.5001 (3)0.2390 (3)0.0405 (12)
N20.3528 (9)0.3678 (3)0.5106 (3)0.0351 (11)
N30.6887 (9)0.2896 (3)0.4912 (3)0.0361 (12)
C10.4559 (11)0.4560 (3)0.2983 (3)0.0362 (14)
C20.2686 (13)0.5527 (4)0.2018 (4)0.0539 (19)
H2A0.32430.60540.20160.065*
H2B0.16440.55330.23030.065*
C30.1534 (13)0.5263 (4)0.1201 (4)0.0532 (18)
H3A0.04100.56410.09470.064*
H3B0.08190.47650.12070.064*
C40.3171 (14)0.5182 (5)0.0754 (4)0.062 (2)
H4A0.24300.49660.02510.074*
H4B0.37350.56940.06850.074*
C50.5064 (13)0.4654 (5)0.1179 (4)0.059 (2)
H5A0.61410.46370.09090.071*
H5B0.45220.41270.11970.071*
C60.6142 (12)0.4953 (4)0.1989 (4)0.0492 (17)
H6A0.73170.46020.22620.059*
H6B0.67740.54650.19730.059*
C70.1837 (11)0.4078 (3)0.5183 (4)0.0411 (15)
H7A0.10030.43860.47780.049*
C80.1278 (12)0.4048 (4)0.5863 (4)0.0472 (17)
H8A0.00980.43400.59050.057*
C90.2441 (12)0.3598 (4)0.6453 (4)0.0436 (16)
H9A0.20490.35680.68980.052*
C100.4269 (12)0.3172 (4)0.6389 (4)0.0399 (15)
C110.4745 (10)0.3239 (3)0.5700 (3)0.0328 (13)
C120.5573 (13)0.2666 (4)0.6979 (4)0.0483 (17)
H12A0.52350.26070.74320.058*
C130.7278 (13)0.2278 (4)0.6880 (4)0.0478 (17)
H13A0.81310.19630.72750.057*
C140.7832 (11)0.2334 (4)0.6183 (4)0.0416 (15)
C150.6546 (11)0.2818 (3)0.5602 (4)0.0343 (13)
C160.9566 (13)0.1938 (4)0.6047 (4)0.0488 (17)
H16A1.04930.16250.64260.059*
C170.9907 (12)0.2009 (4)0.5348 (4)0.0463 (16)
H17A1.10350.17340.52460.056*
C180.8542 (11)0.2500 (4)0.4793 (4)0.0408 (14)
H18A0.87950.25520.43250.049*
U11U22U33U12U13U23
Cu10.0419 (5)0.0493 (5)0.0317 (4)0.0084 (3)0.0172 (4)0.0075 (3)
I10.0453 (3)0.0554 (3)0.0486 (3)−0.0062 (2)0.0204 (2)−0.01413 (19)
S10.0582 (13)0.0803 (13)0.0535 (11)0.0306 (10)0.0335 (10)0.0285 (10)
S20.0402 (9)0.0471 (9)0.0349 (8)0.0043 (7)0.0155 (7)0.0071 (6)
N10.046 (3)0.046 (3)0.032 (3)0.005 (2)0.015 (3)0.011 (2)
N20.038 (3)0.038 (3)0.028 (3)0.000 (2)0.010 (2)−0.001 (2)
N30.035 (3)0.043 (3)0.032 (3)0.001 (2)0.012 (2)0.000 (2)
C10.042 (4)0.039 (3)0.027 (3)0.001 (3)0.010 (3)0.001 (2)
C20.068 (5)0.045 (4)0.042 (4)0.014 (4)0.010 (4)0.009 (3)
C30.055 (5)0.041 (4)0.052 (4)0.003 (3)−0.001 (4)0.004 (3)
C40.071 (6)0.076 (5)0.030 (4)0.002 (4)0.002 (4)−0.001 (3)
C50.058 (5)0.079 (5)0.045 (4)0.009 (4)0.022 (4)0.005 (4)
C60.045 (4)0.060 (4)0.041 (4)0.001 (3)0.011 (3)0.018 (3)
C70.046 (4)0.038 (3)0.044 (4)0.010 (3)0.021 (3)0.001 (3)
C80.051 (4)0.050 (4)0.051 (4)0.001 (3)0.029 (4)−0.007 (3)
C90.058 (5)0.042 (3)0.037 (4)−0.010 (3)0.023 (4)−0.011 (3)
C100.046 (4)0.044 (3)0.034 (3)−0.009 (3)0.019 (3)−0.003 (3)
C110.036 (4)0.032 (3)0.029 (3)−0.009 (2)0.008 (3)0.000 (2)
C120.059 (5)0.056 (4)0.031 (3)−0.009 (3)0.016 (3)0.001 (3)
C130.055 (5)0.050 (4)0.034 (4)−0.008 (3)0.006 (3)0.008 (3)
C140.039 (4)0.041 (3)0.040 (4)−0.005 (3)0.006 (3)0.005 (3)
C150.037 (4)0.033 (3)0.033 (3)−0.001 (2)0.012 (3)−0.001 (2)
C160.049 (5)0.040 (3)0.052 (4)0.003 (3)0.010 (4)0.006 (3)
C170.034 (4)0.046 (4)0.058 (5)0.006 (3)0.012 (3)−0.003 (3)
C180.035 (4)0.046 (3)0.043 (4)0.002 (3)0.014 (3)−0.002 (3)
Cu1—N32.020 (5)C5—H5A0.9700
Cu1—N22.055 (5)C5—H5B0.9700
Cu1—S22.2972 (19)C6—H6A0.9700
Cu1—S12.311 (2)C6—H6B0.9700
Cu1—I12.8694 (16)C7—C81.408 (8)
S1—C11.711 (6)C7—H7A0.9300
S2—C11.711 (7)C8—C91.348 (10)
N1—C11.317 (7)C8—H8A0.9300
N1—C21.457 (9)C9—C101.416 (10)
N1—C61.466 (8)C9—H9A0.9300
N2—C71.326 (8)C10—C111.398 (8)
N2—C111.353 (8)C10—C121.433 (10)
N3—C181.334 (8)C11—C151.419 (9)
N3—C151.361 (7)C12—C131.339 (11)
C2—C31.520 (10)C12—H12A0.9300
C2—H2A0.9700C13—C141.438 (10)
C2—H2B0.9700C13—H13A0.9300
C3—C41.530 (11)C14—C161.391 (10)
C3—H3A0.9700C14—C151.397 (9)
C3—H3B0.9700C16—C171.376 (10)
C4—C51.517 (11)C16—H16A0.9300
C4—H4A0.9700C17—C181.395 (10)
C4—H4B0.9700C17—H17A0.9300
C5—C61.520 (10)C18—H18A0.9300
N3—Cu1—N281.2 (2)C4—C5—H5B109.6
N3—Cu1—S297.36 (16)C6—C5—H5B109.6
N2—Cu1—S2152.84 (15)H5A—C5—H5B108.1
N3—Cu1—S1168.73 (16)N1—C6—C5109.6 (6)
N2—Cu1—S199.97 (15)N1—C6—H6A109.7
S2—Cu1—S176.38 (7)C5—C6—H6A109.7
N3—Cu1—I187.66 (15)N1—C6—H6B109.7
N2—Cu1—I197.75 (14)C5—C6—H6B109.7
S2—Cu1—I1109.33 (6)H6A—C6—H6B108.2
S1—Cu1—I1103.21 (8)N2—C7—C8121.5 (6)
C1—S1—Cu185.2 (2)N2—C7—H7A119.3
C1—S2—Cu185.6 (2)C8—C7—H7A119.3
C1—N1—C2123.5 (6)C9—C8—C7120.4 (6)
C1—N1—C6123.1 (5)C9—C8—H8A119.8
C2—N1—C6113.1 (5)C7—C8—H8A119.8
C7—N2—C11118.8 (5)C8—C9—C10119.2 (6)
C7—N2—Cu1129.5 (4)C8—C9—H9A120.4
C11—N2—Cu1111.6 (4)C10—C9—H9A120.4
C18—N3—C15118.3 (6)C11—C10—C9117.2 (6)
C18—N3—Cu1128.6 (4)C11—C10—C12119.6 (6)
C15—N3—Cu1113.0 (4)C9—C10—C12123.2 (6)
N1—C1—S1123.8 (5)N2—C11—C10122.9 (6)
N1—C1—S2123.5 (5)N2—C11—C15117.6 (5)
S1—C1—S2112.7 (3)C10—C11—C15119.6 (6)
N1—C2—C3110.3 (6)C13—C12—C10120.1 (6)
N1—C2—H2A109.6C13—C12—H12A120.0
C3—C2—H2A109.6C10—C12—H12A120.0
N1—C2—H2B109.6C12—C13—C14122.1 (7)
C3—C2—H2B109.6C12—C13—H13A119.0
H2A—C2—H2B108.1C14—C13—H13A119.0
C2—C3—C4111.0 (7)C16—C14—C15117.5 (6)
C2—C3—H3A109.4C16—C14—C13124.4 (7)
C4—C3—H3A109.4C15—C14—C13118.0 (7)
C2—C3—H3B109.4N3—C15—C14122.8 (6)
C4—C3—H3B109.4N3—C15—C11116.5 (5)
H3A—C3—H3B108.0C14—C15—C11120.6 (6)
C5—C4—C3110.5 (6)C17—C16—C14119.8 (7)
C5—C4—H4A109.6C17—C16—H16A120.1
C3—C4—H4A109.6C14—C16—H16A120.1
C5—C4—H4B109.6C16—C17—C18119.3 (6)
C3—C4—H4B109.6C16—C17—H17A120.4
H4A—C4—H4B108.1C18—C17—H17A120.4
C4—C5—C6110.3 (6)N3—C18—C17122.2 (6)
C4—C5—H5A109.6N3—C18—H18A118.9
C6—C5—H5A109.6C17—C18—H18A118.9
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