Literature DB >> 21200989

catena-Poly[[[triaqua-copper(II)]-μ-pyridine-2,3-dicarboxyl-ato-κN,O:O] monohydrate].

Lujiang Hao, Chunhua Mu, Binbin Kong.   

Abstract

In the title compound, {[Cu(C(7)H(3)NO(4))(H(2)O)(3)]·H(2)O}(n), the Cu(II) ion is bonded to three water mol-ecules, one N,O-bidentate pyridine-2,3-dicarboxyl-ate dianion and one O-bonded symmetry-generated dianion, resulting in a distorted CuNO(5) octa-hedral geometry. The bridging ligand results in an infinite chain. A network of O-H⋯O hydrogen bonds helps to establish the crystal structure.

Entities:  

Year:  2008        PMID: 21200989      PMCID: PMC2959291          DOI: 10.1107/S1600536808025439

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background, see: Serre et al. (2005 ▶).

Experimental

Crystal data

[Cu(C7H3NO4)(H2O)3]·H2O M = 300.71 Monoclinic, a = 8.513 (3) Å b = 17.983 (3) Å c = 7.493 (3) Å β = 114.486 (10)° V = 1043.9 (6) Å3 Z = 4 Mo Kα radiation μ = 2.13 mm−1 T = 296 (2) K 0.40 × 0.28 × 0.22 mm

Data collection

Bruker APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2004 ▶) T min = 0.484, T max = 0.652 2686 measured reflections 1322 independent reflections 1310 reflections with I > 2σ(I) R int = 0.028

Refinement

R[F 2 > 2σ(F 2)] = 0.030 wR(F 2) = 0.089 S = 1.00 1322 reflections 180 parameters 14 restraints H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.61 e Å−3 Δρmin = −0.60 e Å−3 Absolute structure: Flack (1983 ▶), 290 Friedel pairs Flack parameter: 0.05 (3) Data collection: APEX2 (Bruker, 2004 ▶); cell refinement: SAINT-Plus (Bruker, 2004 ▶); data reduction: SAINT-Plus; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536808025439/hb2747sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808025439/hb2747Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Cu(C7H3NO4)(H2O)3]·H2OF(000) = 612
Mr = 300.71Dx = 1.913 Mg m3
Monoclinic, CcMo Kα radiation, λ = 0.71073 Å
Hall symbol: C -2ycCell parameters from 2692 reflections
a = 8.513 (3) Åθ = 2.9–28.1°
b = 17.983 (3) ŵ = 2.13 mm1
c = 7.493 (3) ÅT = 296 K
β = 114.486 (10)°Block, blue
V = 1043.9 (6) Å30.40 × 0.28 × 0.22 mm
Z = 4
Bruker APEXII CCD diffractometer1322 independent reflections
Radiation source: fine-focus sealed tube1310 reflections with I > 2σ(I)
graphiteRint = 0.028
ω scansθmax = 26.0°, θmin = 2.9°
Absorption correction: multi-scan (SADABS; Bruker, 2004)h = −10→10
Tmin = 0.484, Tmax = 0.652k = −22→22
2686 measured reflectionsl = −4→9
Refinement on F2Hydrogen site location: difmap and geom
Least-squares matrix: fullH atoms treated by a mixture of independent and constrained refinement
R[F2 > 2σ(F2)] = 0.030w = 1/[σ2(Fo2) + (0.079P)2 + 0.0702P] where P = (Fo2 + 2Fc2)/3
wR(F2) = 0.089(Δ/σ)max < 0.001
S = 1.00Δρmax = 0.61 e Å3
1322 reflectionsΔρmin = −0.60 e Å3
180 parametersExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
14 restraintsExtinction coefficient: 0.018 (2)
Primary atom site location: structure-invariant direct methodsAbsolute structure: Flack (1983), 290 Friedel pairs
Secondary atom site location: difference Fourier mapFlack parameter: 0.05 (3)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cu10.00453 (5)0.118674 (19)0.25189 (5)0.0226 (2)
C1−0.1893 (6)0.1125 (2)−0.2173 (8)0.0257 (10)
C20.0162 (7)0.2776 (2)0.2417 (8)0.0261 (9)
C30.1909 (5)0.2542 (2)0.2398 (6)0.0220 (8)
C40.3188 (5)0.3044 (2)0.2468 (6)0.0224 (8)
C50.4612 (5)0.2816 (2)0.2256 (6)0.0222 (9)
H50.54430.31540.22660.027*
C60.4781 (6)0.2094 (3)0.2034 (7)0.0325 (10)
H60.57470.19220.18780.039*
C70.3554 (7)0.1592 (3)0.2028 (8)0.0350 (10)
H70.37190.10880.18900.042*
N10.2118 (5)0.18178 (19)0.2218 (6)0.0262 (7)
O1−0.1400 (5)0.0911 (2)−0.0470 (5)0.0356 (8)
O2−0.2392 (5)0.07157 (19)−0.3667 (5)0.0363 (7)
O3−0.0834 (4)0.22671 (17)0.2399 (6)0.0323 (7)
O4−0.0130 (6)0.34452 (16)0.2387 (9)0.0401 (8)
O50.1420 (5)0.12328 (17)0.5699 (7)0.0311 (9)
O60.1266 (5)0.01799 (18)0.2664 (7)0.0427 (9)
O7−0.2021 (4)0.07356 (18)0.2898 (5)0.0309 (7)
O80.4601 (7)−0.0181 (3)0.4257 (10)0.0777 (18)
H1W0.553 (6)−0.004 (6)0.515 (11)0.093*
H2W0.377 (7)−0.006 (6)0.451 (14)0.093*
H4W0.105 (10)0.080 (2)0.551 (16)0.093*
H5W0.092 (12)−0.008 (5)0.167 (10)0.093*
H6W0.229 (5)0.011 (5)0.340 (12)0.093*
H7W−0.214 (15)0.067 (5)0.393 (9)0.093*
H8W−0.195 (16)0.034 (3)0.238 (13)0.093*
H3W0.248 (3)0.126 (4)0.620 (19)0.093*
U11U22U33U12U13U23
Cu10.0221 (3)0.0153 (3)0.0307 (3)−0.0014 (2)0.0111 (2)0.0008 (2)
C10.024 (2)0.021 (2)0.033 (3)0.0026 (14)0.013 (2)0.0011 (15)
C20.0229 (19)0.0210 (17)0.0315 (18)0.0045 (18)0.0084 (15)−0.0004 (19)
C30.0223 (19)0.0198 (18)0.0229 (18)0.0031 (15)0.0083 (15)0.0014 (14)
C40.0208 (18)0.0218 (19)0.0220 (17)0.0000 (14)0.0064 (15)0.0016 (15)
C50.026 (2)0.0141 (17)0.032 (2)0.0009 (13)0.017 (2)0.0013 (15)
C60.034 (3)0.027 (2)0.042 (3)0.0042 (18)0.022 (2)0.0008 (16)
C70.045 (3)0.0219 (18)0.044 (2)0.0067 (19)0.025 (2)0.0011 (18)
N10.0284 (18)0.0215 (16)0.0293 (17)0.0018 (14)0.0125 (15)−0.0001 (14)
O10.0475 (19)0.0275 (18)0.0292 (16)−0.0008 (15)0.0133 (15)0.0000 (14)
O20.055 (2)0.0236 (14)0.0343 (16)−0.0049 (14)0.0230 (16)−0.0069 (13)
O30.0226 (17)0.0253 (16)0.0519 (19)0.0004 (12)0.0185 (14)0.0011 (14)
O40.0274 (17)0.0214 (15)0.073 (2)0.0041 (14)0.0220 (17)−0.0029 (19)
O50.0266 (16)0.0281 (19)0.033 (2)−0.0011 (11)0.0062 (16)−0.0014 (12)
O60.0362 (17)0.0247 (16)0.056 (2)0.0078 (15)0.0077 (15)−0.0088 (16)
O70.0313 (16)0.0262 (15)0.0355 (16)−0.0074 (13)0.0142 (14)−0.0040 (14)
O80.035 (2)0.054 (3)0.108 (4)0.0047 (18)−0.006 (3)−0.023 (3)
Cu1—O72.061 (3)C4—C1ii1.525 (5)
Cu1—O62.068 (3)C5—C61.325 (6)
Cu1—O32.071 (3)C5—H50.9300
Cu1—O12.119 (4)C6—C71.379 (7)
Cu1—O52.178 (5)C6—H60.9300
Cu1—N12.187 (4)C7—N11.350 (6)
C1—O11.228 (7)C7—H70.9300
C1—O21.258 (6)O5—H4W0.82 (2)
C1—C4i1.525 (5)O5—H3W0.82 (9)
C2—O41.227 (5)O6—H5W0.82 (7)
C2—O31.244 (6)O6—H6W0.83 (7)
C2—C31.552 (6)O7—H7W0.83 (8)
C3—N11.328 (5)O7—H8W0.83 (8)
C3—C41.399 (6)O8—H1W0.84 (8)
C4—C51.349 (6)O8—H2W0.83 (8)
O7—Cu1—O695.00 (16)C3—C4—C1ii123.2 (4)
O7—Cu1—O393.52 (13)C6—C5—C4117.5 (4)
O6—Cu1—O3171.34 (14)C6—C5—H5121.2
O7—Cu1—O184.19 (14)C4—C5—H5121.2
O6—Cu1—O184.83 (16)C5—C6—C7121.3 (5)
O3—Cu1—O197.60 (15)C5—C6—H6119.3
O7—Cu1—O588.09 (15)C7—C6—H6119.3
O6—Cu1—O586.87 (16)N1—C7—C6121.4 (4)
O3—Cu1—O591.87 (14)N1—C7—H7119.3
O1—Cu1—O5168.12 (14)C6—C7—H7119.3
O7—Cu1—N1171.80 (13)C3—N1—C7118.0 (4)
O6—Cu1—N192.89 (17)C3—N1—Cu1110.5 (3)
O3—Cu1—N178.54 (13)C7—N1—Cu1131.3 (3)
O1—Cu1—N198.75 (15)C1—O1—Cu1145.4 (3)
O5—Cu1—N190.13 (15)C2—O3—Cu1117.2 (3)
O1—C1—O2125.8 (4)Cu1—O5—H4W77 (8)
O1—C1—C4i118.0 (4)Cu1—O5—H3W119 (10)
O2—C1—C4i116.1 (4)H4W—O5—H3W114 (4)
O4—C2—O3126.1 (5)Cu1—O6—H5W118 (7)
O4—C2—C3117.0 (5)Cu1—O6—H6W122 (7)
O3—C2—C3116.8 (4)H5W—O6—H6W114 (9)
N1—C3—C4120.1 (4)Cu1—O7—H7W129 (8)
N1—C3—C2115.9 (4)Cu1—O7—H8W92 (8)
C4—C3—C2123.9 (4)H7W—O7—H8W112 (9)
C5—C4—C3121.5 (4)H1W—O8—H2W111 (4)
C5—C4—C1ii115.3 (4)
D—H···AD—HH···AD···AD—H···A
O5—H3W···O4ii0.82 (9)1.93 (8)2.735 (6)167 (8)
O5—H4W···O6iii0.82 (2)2.35 (8)2.966 (5)132 (10)
O6—H5W···O5iv0.82 (7)2.29 (7)2.966 (5)140 (9)
O7—H7W···O2v0.83 (8)1.90 (9)2.720 (5)169 (8)
O7—H8W···O2iii0.83 (8)2.03 (4)2.825 (5)162 (11)
Table 1

Selected bond lengths (Å)

Cu1—O72.061 (3)
Cu1—O62.068 (3)
Cu1—O32.071 (3)
Cu1—O12.119 (4)
Cu1—O52.178 (5)
Cu1—N12.187 (4)
Table 2

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O5—H3W⋯O4i0.82 (9)1.93 (8)2.735 (6)167 (8)
O5—H4W⋯O6ii0.82 (2)2.35 (8)2.966 (5)132 (10)
O6—H5W⋯O5iii0.82 (7)2.29 (7)2.966 (5)140 (9)
O7—H7W⋯O2iv0.83 (8)1.90 (9)2.720 (5)169 (8)
O7—H8W⋯O2ii0.83 (8)2.03 (4)2.825 (5)162 (11)

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .

  2 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  An open-framework rare-earth acetylenedicarboxylate: MIL-95, Eu(III)2(H2O)2(CO3)2.{O2C-C2-CO2}.{H2O}x.

Authors:  Christian Serre; Jérôme Marrot; Gérard Férey
Journal:  Inorg Chem       Date:  2005-02-07       Impact factor: 5.165

  2 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.