Literature DB >> 21200968

2-Methyl-2-(4-nitro-phenyl-sulfanyl)-propanoic acid.

Gabriel Navarrete-Vázquez, Rafael Villalobos-Molina, Samuel Estrada-Soto, Rolffy Ortiz-Andrade, Hugo Tlahuext.   

Abstract

The title compound, C(10)H(11)NO(4)S, is of inter-est with respect to its biological activity. The mol-ecules are linked into centrosymmetric dimers by inter-molecular O-H⋯O hydrogen bonds and the dimers are further connected into chains by weak C-H⋯O inter-actions.

Entities:  

Year:  2007        PMID: 21200968      PMCID: PMC2915046          DOI: 10.1107/S1600536807062678

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related literature on fibrate structures and biological activity, see: Henry et al. (2003 ▶); Rath et al. (2005 ▶); Djinović et al. (1989 ▶); Thorp (1962 ▶); Thorp & Waring (1962 ▶); Miller & Spence (1998 ▶); Forcheron et al. (2002 ▶). For related literature, see: Bernstein et al. (1995 ▶); Desiraju (2002 ▶).

Experimental

Crystal data

C10H11NO4S M = 241.26 Triclinic, a = 6.9382 (8) Å b = 9.4500 (11) Å c = 9.6395 (11) Å α = 66.371 (2)° β = 87.995 (2)° γ = 88.298 (2)° V = 578.60 (12) Å3 Z = 2 Mo Kα radiation μ = 0.28 mm−1 T = 273 (2) K 0.32 × 0.23 × 0.18 mm

Data collection

Bruker SMART CCD area detector diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 2003 ▶) T min = 0.92, T max = 0.95 5660 measured reflections 2036 independent reflections 1718 reflections with I > 2σ(I) R int = 0.020

Refinement

R[F 2 > 2σ(F 2)] = 0.048 wR(F 2) = 0.123 S = 1.08 2036 reflections 148 parameters H-atom parameters constrained Δρmax = 0.28 e Å−3 Δρmin = −0.17 e Å−3 Data collection: SMART (Bruker, 2000 ▶); cell refinement: SAINT-Plus NT (Bruker, 2000 ▶); data reduction: SAINT-Plus NT; program(s) used to solve structure: SHELXS97 (Sheldrick, 1997 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997 ▶); molecular graphics: SHELXTL-NT (Bruker, 2000 ▶); software used to prepare material for publication: PLATON (Spek, 2003 ▶) and publCIF (Westrip, 2007 ▶). Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536807062678/ln2010sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536807062678/ln2010Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C10H11NO4SZ = 2
Mr = 241.26F000 = 252
Triclinic, P1Dx = 1.385 Mg m3
Hall symbol: -P 1Melting point: 394.9 K
a = 6.9382 (8) ÅMo Kα radiation λ = 0.71073 Å
b = 9.4500 (11) ÅCell parameters from 2036 reflections
c = 9.6395 (11) Åθ = 2.3–25º
α = 66.371 (2)ºµ = 0.28 mm1
β = 87.995 (2)ºT = 273 (2) K
γ = 88.298 (2)ºPlate, colourless
V = 578.60 (12) Å30.32 × 0.23 × 0.18 mm
Bruker CCD area detector diffractometer2036 independent reflections
Radiation source: fine-focus sealed tube1718 reflections with I > 2σ(I)
Monochromator: graphiteRint = 0.020
T = 273(2) Kθmax = 25.0º
φ and ω scansθmin = 2.3º
Absorption correction: multi-scan(SADABS; Sheldrick, 2003)h = −8→8
Tmin = 0.92, Tmax = 0.95k = −11→11
5660 measured reflectionsl = −11→11
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.048H-atom parameters constrained
wR(F2) = 0.123  w = 1/[σ2(Fo2) + (0.06P)2 + 0.156P] where P = (Fo2 + 2Fc2)/3
S = 1.08(Δ/σ)max < 0.001
2036 reflectionsΔρmax = 0.28 e Å3
148 parametersΔρmin = −0.17 e Å3
Primary atom site location: structure-invariant direct methodsExtinction correction: none
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.1054 (3)0.1894 (3)0.6403 (2)0.0531 (5)
C20.1738 (3)0.0380 (3)0.6935 (3)0.0580 (6)
H20.30370.01680.71530.070*
C30.0525 (3)−0.0797 (3)0.7141 (3)0.0576 (6)
H30.0982−0.18130.75090.069*
C4−0.1375 (3)−0.0462 (3)0.6797 (2)0.0524 (5)
C5−0.2096 (4)0.1026 (3)0.6234 (3)0.0608 (6)
H5−0.33880.12310.59880.073*
C6−0.0871 (3)0.2196 (3)0.6045 (3)0.0599 (6)
H6−0.13360.32100.56690.072*
C70.2702 (4)0.3441 (3)0.8037 (3)0.0624 (6)
C80.3733 (3)0.1963 (3)0.9005 (3)0.0568 (6)
C90.0695 (4)0.3533 (4)0.8653 (3)0.0837 (9)
H9A0.00230.26020.88210.125*
H9B0.00110.44020.79360.125*
H9C0.07730.36530.95920.125*
C100.3903 (5)0.4859 (3)0.7791 (4)0.0940 (10)
H10A0.40760.49280.87450.141*
H10B0.32470.57730.71190.141*
H10C0.51400.47640.73540.141*
N1−0.2678 (3)−0.1730 (3)0.7030 (2)0.0674 (6)
O1−0.2015 (3)−0.3028 (2)0.7498 (3)0.0997 (7)
O2−0.4350 (3)−0.1430 (3)0.6715 (3)0.1118 (9)
O30.2868 (2)0.0840 (2)0.98479 (19)0.0724 (5)
O40.5595 (3)0.1977 (2)0.8833 (2)0.0839 (6)
H40.60340.11010.92830.126*
S10.26504 (9)0.34147 (7)0.61287 (7)0.0636 (2)
U11U22U33U12U13U23
C10.0654 (14)0.0463 (12)0.0439 (11)0.0029 (10)−0.0021 (10)−0.0142 (9)
C20.0524 (13)0.0544 (14)0.0660 (14)0.0081 (11)−0.0043 (11)−0.0233 (11)
C30.0646 (15)0.0425 (12)0.0637 (14)0.0088 (10)0.0004 (11)−0.0201 (10)
C40.0580 (13)0.0509 (12)0.0505 (12)0.0010 (10)0.0029 (10)−0.0230 (10)
C50.0566 (13)0.0572 (14)0.0687 (15)0.0103 (11)−0.0110 (11)−0.0252 (12)
C60.0675 (15)0.0447 (12)0.0632 (14)0.0124 (11)−0.0135 (11)−0.0170 (11)
C70.0765 (16)0.0474 (13)0.0621 (14)0.0032 (11)−0.0115 (12)−0.0203 (11)
C80.0599 (15)0.0550 (14)0.0535 (13)−0.0011 (11)−0.0059 (11)−0.0192 (11)
C90.090 (2)0.084 (2)0.0815 (19)0.0282 (16)−0.0080 (15)−0.0396 (16)
C100.126 (3)0.0560 (16)0.102 (2)−0.0089 (16)−0.0276 (19)−0.0311 (16)
N10.0681 (14)0.0593 (13)0.0789 (14)−0.0041 (11)0.0051 (11)−0.0323 (11)
O10.0975 (15)0.0514 (12)0.144 (2)−0.0033 (10)−0.0158 (13)−0.0309 (12)
O20.0606 (13)0.0851 (15)0.197 (3)−0.0033 (11)−0.0088 (14)−0.0639 (16)
O30.0667 (11)0.0628 (11)0.0653 (11)−0.0002 (9)0.0036 (8)−0.0026 (9)
O40.0596 (11)0.0673 (12)0.0976 (15)−0.0026 (9)−0.0058 (9)−0.0041 (10)
S10.0762 (5)0.0503 (4)0.0543 (4)−0.0081 (3)−0.0034 (3)−0.0100 (3)
C1—C61.384 (3)C7—C101.531 (4)
C1—C21.387 (3)C7—S11.851 (2)
C1—S11.769 (2)C8—O31.208 (3)
C2—C31.361 (3)C8—O41.296 (3)
C2—H20.9300C9—H9A0.9600
C3—C41.368 (3)C9—H9B0.9600
C3—H30.9300C9—H9C0.9600
C4—C51.374 (3)C10—H10A0.9600
C4—N11.462 (3)C10—H10B0.9600
C5—C61.364 (3)C10—H10C0.9600
C5—H50.9300N1—O21.206 (3)
C6—H60.9300N1—O11.207 (3)
C7—C81.508 (3)O4—H40.8200
C7—C91.508 (4)
C6—C1—C2119.0 (2)C9—C7—S1111.51 (18)
C6—C1—S1120.86 (17)C10—C7—S1103.62 (19)
C2—C1—S1120.08 (18)O3—C8—O4122.9 (2)
C3—C2—C1120.5 (2)O3—C8—C7121.8 (2)
C3—C2—H2119.7O4—C8—C7115.3 (2)
C1—C2—H2119.7C7—C9—H9A109.5
C2—C3—C4119.0 (2)C7—C9—H9B109.5
C2—C3—H3120.5H9A—C9—H9B109.5
C4—C3—H3120.5C7—C9—H9C109.5
C3—C4—C5122.1 (2)H9A—C9—H9C109.5
C3—C4—N1118.9 (2)H9B—C9—H9C109.5
C5—C4—N1119.0 (2)C7—C10—H10A109.5
C6—C5—C4118.4 (2)C7—C10—H10B109.5
C6—C5—H5120.8H10A—C10—H10B109.5
C4—C5—H5120.8C7—C10—H10C109.5
C5—C6—C1120.9 (2)H10A—C10—H10C109.5
C5—C6—H6119.6H10B—C10—H10C109.5
C1—C6—H6119.6O2—N1—O1123.1 (2)
C8—C7—C9111.5 (2)O2—N1—C4118.7 (2)
C8—C7—C10111.5 (2)O1—N1—C4118.2 (2)
C9—C7—C10112.9 (2)C8—O4—H4109.5
C8—C7—S1105.22 (16)C1—S1—C7102.66 (11)
C6—C1—C2—C3−1.8 (3)C9—C7—C8—O4−160.9 (2)
S1—C1—C2—C3−179.55 (18)C10—C7—C8—O4−33.6 (3)
C1—C2—C3—C40.8 (4)S1—C7—C8—O478.0 (2)
C2—C3—C4—C50.8 (4)C3—C4—N1—O2−179.4 (2)
C2—C3—C4—N1−179.5 (2)C5—C4—N1—O20.3 (4)
C3—C4—C5—C6−1.3 (4)C3—C4—N1—O1−1.1 (3)
N1—C4—C5—C6179.0 (2)C5—C4—N1—O1178.6 (2)
C4—C5—C6—C10.3 (4)C6—C1—S1—C797.2 (2)
C2—C1—C6—C51.2 (4)C2—C1—S1—C7−85.1 (2)
S1—C1—C6—C5178.97 (19)C8—C7—S1—C168.65 (18)
C9—C7—C8—O320.9 (3)C9—C7—S1—C1−52.4 (2)
C10—C7—C8—O3148.1 (3)C10—C7—S1—C1−174.16 (18)
S1—C7—C8—O3−100.2 (2)
D—H···AD—HH···AD···AD—H···A
O4—H4···O3i0.821.842.656 (3)175
C2—H2···O2ii0.932.463.211 (3)138
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O4—H4⋯O3i0.821.842.656 (3)175
C2—H2⋯O2ii0.932.463.211 (3)138

Symmetry codes: (i) ; (ii) .

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