Literature DB >> 21200909

7-(1,3-Dioxolan-2-ylmeth-yl)-1,3-di-methyl-purine-2,6(1H,3H)-dione trichloro-acetic acid solvate.

Xiang-Xiang Wu, Zhan Shu, Lin-Lin Ma, Zhe-Wu Ding, Zhi-Min Jin.   

Abstract

In the title compound, C(11)H(14)N(4)O(4)·C(2)HCl(3)O(2), the dioxolane ring adopts an envelope conformation. Doxophylline [7-(1,3-dioxolan-2-yl-meth-yl)-1,3-dimethyl-3,7-dihydro-1H-purine-2,6-dione] and trichloro-acetic acid mol-ecules are linked by O-H⋯N and C-H⋯O hydrogen bonds.

Entities:  

Year:  2007        PMID: 21200909      PMCID: PMC2915388          DOI: 10.1107/S1600536807067025

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related literature, see: Chen et al. (2006 ▶, 2007 ▶); Feng et al. (2007 ▶); Franzone et al. (1981 ▶); Li et al. (1995 ▶); Villani et al. (1997 ▶).

Experimental

Crystal data

C11H14N4O4·C2HCl3O2 M = 429.64 Triclinic, a = 5.656 (3) Å b = 10.825 (5) Å c = 14.962 (7) Å α = 93.217 (9)° β = 91.090 (8)° γ = 101.725 (9)° V = 895.1 (8) Å3 Z = 2 Mo Kα radiation μ = 0.55 mm−1 T = 293 (2) K 0.38 × 0.28 × 0.17 mm

Data collection

Bruker APEX area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2000 ▶) T min = 0.818, T max = 0.912 4717 measured reflections 3124 independent reflections 2915 reflections with I > 2σ(I) R int = 0.015

Refinement

R[F 2 > 2σ(F 2)] = 0.073 wR(F 2) = 0.167 S = 1.15 3124 reflections 238 parameters H-atom parameters constrained Δρmax = 0.32 e Å−3 Δρmin = −0.41 e Å−3 Data collection: SMART (Bruker, 2000 ▶); cell refinement: SAINT (Bruker, 2000 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 1997 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997 ▶); molecular graphics: SHELXTL (Bruker, 2000 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536807067025/cs2059sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536807067025/cs2059Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C11H14N4O4·C2HCl3O2Z = 2
Mr = 429.64F000 = 440
Triclinic, P1Dx = 1.594 Mg m3
a = 5.656 (3) ÅMo Kα radiation λ = 0.71073 Å
b = 10.825 (5) ÅCell parameters from 1931 reflections
c = 14.962 (7) Åθ = 2.4–24.7º
α = 93.217 (9)ºµ = 0.55 mm1
β = 91.090 (8)ºT = 293 (2) K
γ = 101.725 (9)ºBlock, colorless
V = 895.1 (8) Å30.38 × 0.28 × 0.17 mm
Bruker APEX area-detector diffractometer3124 independent reflections
Radiation source: fine-focus sealed tube2915 reflections with I > 2σ(I)
Monochromator: graphiteRint = 0.015
T = 273(2) Kθmax = 25.0º
φ and ω scansθmin = 1.9º
Absorption correction: multi-scan(SADABS; Bruker, 2000)h = −6→6
Tmin = 0.818, Tmax = 0.912k = −12→10
4717 measured reflectionsl = −16→17
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.073H-atom parameters constrained
wR(F2) = 0.167  w = 1/[σ2(Fo2) + (0.0594P)2 + 1.1669P] where P = (Fo2 + 2Fc2)/3
S = 1.15(Δ/σ)max < 0.001
3124 reflectionsΔρmax = 0.32 e Å3
238 parametersΔρmin = −0.41 e Å3
Primary atom site location: structure-invariant direct methodsExtinction correction: none
xyzUiso*/Ueq
Cl11.5096 (2)0.72892 (10)0.71995 (10)0.0764 (4)
Cl21.8985 (2)0.61490 (16)0.77278 (12)0.1021 (6)
Cl31.7335 (3)0.59298 (13)0.58909 (10)0.0997 (6)
O10.3256 (5)−0.0373 (3)0.80906 (17)0.0546 (7)
O20.3073 (6)0.0976 (3)0.5250 (2)0.0733 (9)
O30.4973 (4)0.1851 (3)0.96858 (18)0.0602 (8)
O40.8810 (5)0.2918 (3)0.99418 (19)0.0623 (8)
O51.4500 (7)0.4439 (4)0.7965 (2)0.1070 (15)
O61.3136 (5)0.4325 (3)0.65695 (18)0.0636 (8)
H61.20450.37770.67410.095*
N10.3188 (5)0.0331 (3)0.66788 (19)0.0419 (7)
N20.6381 (6)0.1835 (3)0.61213 (18)0.0449 (7)
N30.8290 (5)0.1395 (3)0.83050 (18)0.0405 (7)
N40.9777 (5)0.2545 (3)0.71822 (18)0.0430 (7)
C10.4252 (6)0.0310 (3)0.7528 (2)0.0393 (8)
C20.4147 (7)0.1040 (4)0.5965 (2)0.0478 (9)
C30.7539 (6)0.1868 (3)0.6938 (2)0.0366 (7)
C40.6551 (6)0.1155 (3)0.7615 (2)0.0359 (7)
C51.0141 (6)0.2218 (3)0.8011 (2)0.0453 (9)
C60.8182 (7)0.0864 (4)0.9184 (2)0.0503 (9)
C70.7322 (7)0.1697 (4)0.9889 (2)0.0556 (10)
C80.4837 (8)0.3052 (6)1.0101 (4)0.0819 (16)
C90.7308 (9)0.3811 (5)1.0075 (4)0.0873 (16)
C100.0798 (7)−0.0510 (4)0.6519 (3)0.0571 (10)
C110.7596 (9)0.2537 (4)0.5391 (3)0.0668 (12)
C121.4565 (7)0.4789 (4)0.7231 (3)0.0495 (9)
C131.6453 (7)0.5977 (4)0.7006 (3)0.0510 (9)
H51.15510.25350.83500.054*
H6A0.97760.07440.93600.060*
H6B0.71000.00420.91440.060*
H70.73540.13251.04700.067*
H8A0.43260.29691.07140.098*
H8B0.37080.34380.97740.098*
H9A0.74450.43730.95880.105*
H9B0.77470.43121.06340.105*
H10A0.0989−0.13710.64470.086*
H10B0.0050−0.02890.59860.086*
H10C−0.0200−0.04180.70200.086*
H11A0.80420.34180.55770.100*
H11B0.65210.24280.48750.100*
H11C0.90190.22230.52420.100*
U11U22U33U12U13U23
Cl10.0576 (7)0.0484 (6)0.1235 (11)0.0101 (5)0.0154 (6)0.0069 (6)
Cl20.0387 (6)0.1176 (12)0.1433 (14)−0.0071 (7)−0.0153 (7)0.0424 (10)
Cl30.1202 (12)0.0764 (9)0.0881 (9)−0.0186 (8)0.0608 (9)0.0041 (7)
O10.0479 (15)0.0548 (16)0.0536 (16)−0.0104 (12)0.0042 (12)0.0136 (13)
O20.072 (2)0.090 (2)0.0536 (17)0.0053 (17)−0.0215 (15)0.0125 (16)
O30.0333 (14)0.082 (2)0.0569 (16)−0.0045 (13)0.0028 (12)−0.0057 (15)
O40.0353 (14)0.079 (2)0.0644 (18)−0.0036 (14)−0.0027 (12)−0.0114 (15)
O50.104 (3)0.112 (3)0.075 (2)−0.056 (2)−0.026 (2)0.045 (2)
O60.0586 (18)0.069 (2)0.0498 (16)−0.0202 (14)0.0089 (13)0.0087 (14)
N10.0351 (15)0.0415 (16)0.0468 (17)0.0035 (12)−0.0024 (12)0.0012 (13)
N20.0542 (18)0.0444 (17)0.0354 (15)0.0063 (14)0.0030 (13)0.0088 (13)
N30.0389 (16)0.0432 (16)0.0365 (15)0.0000 (13)0.0013 (12)0.0077 (12)
N40.0443 (17)0.0416 (16)0.0383 (16)−0.0031 (13)0.0063 (12)0.0038 (12)
C10.0368 (18)0.0346 (17)0.0459 (19)0.0054 (14)0.0054 (15)0.0030 (15)
C20.047 (2)0.050 (2)0.045 (2)0.0095 (17)−0.0058 (16)0.0038 (16)
C30.0375 (18)0.0328 (17)0.0380 (17)0.0035 (14)0.0047 (14)0.0021 (13)
C40.0342 (17)0.0352 (17)0.0378 (17)0.0054 (13)0.0032 (13)0.0033 (14)
C50.0369 (19)0.050 (2)0.044 (2)−0.0031 (16)0.0009 (15)0.0002 (16)
C60.047 (2)0.056 (2)0.047 (2)0.0045 (17)−0.0028 (16)0.0192 (17)
C70.045 (2)0.081 (3)0.038 (2)0.000 (2)−0.0019 (16)0.0173 (19)
C80.048 (3)0.111 (4)0.079 (3)0.006 (3)−0.002 (2)−0.024 (3)
C90.056 (3)0.091 (4)0.107 (4)0.005 (3)−0.005 (3)−0.022 (3)
C100.042 (2)0.056 (2)0.068 (3)0.0014 (18)−0.0051 (18)−0.005 (2)
C110.082 (3)0.073 (3)0.041 (2)0.002 (2)0.007 (2)0.019 (2)
C120.043 (2)0.048 (2)0.054 (2)−0.0007 (17)0.0092 (17)0.0112 (18)
C130.038 (2)0.050 (2)0.063 (2)0.0029 (17)0.0123 (17)0.0080 (18)
Cl1—C131.760 (4)N4—C51.331 (5)
Cl2—C131.750 (4)N4—C31.359 (4)
Cl3—C131.752 (4)C1—C41.429 (5)
O1—C11.222 (4)C4—C31.366 (5)
O2—C21.212 (4)C5—H50.9300
O3—C71.402 (5)C6—C71.501 (6)
O3—C81.426 (6)C6—H6A0.9700
O4—C71.413 (5)C6—H6B0.9700
O4—C91.419 (6)C7—H70.9800
O5—C121.181 (5)C8—C91.472 (7)
O6—C121.278 (5)C8—H8A0.9700
O6—H60.8200C8—H8B0.9700
N1—C11.398 (4)C9—H9A0.9700
N1—C21.403 (5)C9—H9B0.9700
N1—C101.475 (5)C10—H10A0.9600
N2—C31.371 (4)C10—H10B0.9600
N2—C21.384 (5)C10—H10C0.9600
N2—C111.468 (5)C11—H11A0.9600
N3—C51.330 (4)C11—H11B0.9600
N3—C41.388 (4)C11—H11C0.9600
N3—C61.462 (4)C12—C131.553 (5)
C1—N1—C2127.5 (3)O3—C8—H8A110.8
C1—N1—C10115.6 (3)O3—C8—H8B110.8
C2—N1—C10116.9 (3)O4—C7—C6110.6 (3)
C2—N2—C11120.1 (3)O4—C7—H7109.5
C3—N2—C2119.3 (3)O4—C9—C8105.2 (4)
C3—N2—C11120.4 (3)O4—C9—H9A110.7
C3—C4—N3105.3 (3)O4—C9—H9B110.7
C3—C4—C1123.0 (3)O5—C12—O6126.9 (4)
C4—N3—C6128.3 (3)O5—C12—C13119.8 (4)
C4—C3—N2122.3 (3)O6—C12—C13113.1 (3)
C5—N3—C4106.2 (3)N1—C1—C4111.3 (3)
C5—N3—C6125.5 (3)N1—C10—H10A109.5
C5—N4—C3104.1 (3)N1—C10—H10B109.5
C6—C7—H7109.5N1—C10—H10C109.5
C7—O3—C8104.9 (3)N2—C2—N1116.6 (3)
C7—O4—C9108.0 (3)N2—C11—H11A109.5
C7—C6—H6A109.1N2—C11—H11B109.5
C7—C6—H6B109.1N2—C11—H11C109.5
C8—C9—H9A110.7N3—C4—C1131.6 (3)
C8—C9—H9B110.7N3—C5—N4113.3 (3)
C9—C8—H8A110.8N3—C5—H5123.3
C9—C8—H8B110.8N3—C6—C7112.3 (3)
C12—O6—H6109.5N3—C6—H6A109.1
C12—C13—Cl2109.4 (3)N3—C6—H6B109.1
C12—C13—Cl3113.0 (3)N4—C3—C4111.1 (3)
Cl2—C13—Cl3109.9 (2)N4—C3—N2126.6 (3)
C12—C13—Cl1107.0 (3)N4—C5—H5123.3
Cl2—C13—Cl1108.7 (2)H6A—C6—H6B107.9
Cl3—C13—Cl1108.6 (2)H8A—C8—H8B108.9
O1—C1—N1121.5 (3)H9A—C9—H9B108.8
O1—C1—C4127.2 (3)H10A—C10—H10B109.5
O2—C2—N2121.3 (4)H10A—C10—H10C109.5
O2—C2—N1122.1 (4)H10B—C10—H10C109.5
O3—C7—O4106.5 (3)H11A—C11—H11B109.5
O3—C7—C6111.3 (3)H11A—C11—H11C109.5
O3—C7—H7109.5H11B—C11—H11C109.5
O3—C8—C9104.8 (4)
C1—C4—C3—N4−177.2 (3)C9—O4—C7—O319.5 (4)
C1—C4—C3—N20.6 (5)C9—O4—C7—C6140.7 (4)
C1—N1—C2—O2179.3 (4)C10—N1—C1—O10.6 (5)
C1—N1—C2—N2−1.6 (5)C10—N1—C1—C4−179.9 (3)
C2—N1—C1—O1−178.2 (3)C10—N1—C2—O20.4 (6)
C2—N1—C1—C41.2 (5)C10—N1—C2—N2179.5 (3)
C2—N2—C3—N4176.5 (3)C11—N2—C3—N42.5 (5)
C2—N2—C3—C4−1.0 (5)C11—N2—C3—C4−175.0 (4)
C3—N2—C2—O2−179.5 (4)C11—N2—C2—O2−5.5 (6)
C3—N2—C2—N11.4 (5)C11—N2—C2—N1175.4 (3)
C3—N4—C5—N3−0.4 (4)N1—C1—C4—C3−0.7 (5)
C4—N3—C5—N4−0.1 (4)N1—C1—C4—N3−176.0 (3)
C4—N3—C6—C7−94.6 (4)N3—C4—C3—N4−0.9 (4)
C5—N3—C6—C785.8 (4)N3—C4—C3—N2177.0 (3)
C5—N3—C4—C30.6 (4)N3—C6—C7—O361.6 (4)
C5—N3—C4—C1176.4 (4)N3—C6—C7—O4−56.6 (4)
C5—N4—C3—C40.8 (4)O1—C1—C4—C3178.8 (3)
C5—N4—C3—N2−176.9 (3)O1—C1—C4—N33.5 (6)
C6—N3—C5—N4179.6 (3)O3—C8—C9—O4−19.2 (6)
C6—N3—C4—C3−179.2 (3)O5—C12—C13—Cl227.5 (5)
C6—N3—C4—C1−3.3 (6)O5—C12—C13—Cl3150.4 (4)
C7—O3—C8—C931.3 (5)O5—C12—C13—Cl1−90.1 (5)
C7—O4—C9—C80.1 (5)O6—C12—C13—Cl2−155.6 (3)
C8—O3—C7—O4−31.7 (4)O6—C12—C13—Cl3−32.7 (4)
C8—O3—C7—C6−152.3 (4)O6—C12—C13—Cl186.8 (4)
D—H···AD—HH···AD···AD—H···A
O6—H6···N40.821.822.635 (4)176
C5—H5···O50.932.483.079 (5)123
C7—H7···O1i0.982.443.410 (5)171
C10—H10B···O2ii0.962.513.351 (3)147
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O6—H6⋯N40.821.822.635 (4)176
C5—H5⋯O50.932.483.079 (5)123
C7—H7⋯O1i0.982.443.410 (5)171
C10—H10B⋯O2ii0.962.513.351 (3)147

Symmetry codes: (i) ; (ii) .

  2 in total

1.  Pharmacological researches on 2-(7'-theophyllinemethyl)1,3-dioxolane.

Authors:  J S Franzone; C Reboani; D Fonzo; R Di Carlo
Journal:  Farmaco Sci       Date:  1981-03

2.  Oral doxophylline in patients with chronic obstructive pulmonary disease.

Authors:  F Villani; P De Maria; E Ronchi; M Galimberti
Journal:  Int J Clin Pharmacol Ther       Date:  1997-03       Impact factor: 1.366

  2 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.