| Literature DB >> 21200907 |
Carol A Ellis, Edward R T Tiekink, Julio Zukerman-Schpector.
Abstract
The configuration of the thione-aryl C-N single bond in the title mol-ecule, C(10)H(12)N(2)O(3)S, is E. Centrosymmetrically related mol-ecules are connected into a dimer via an eight-membered thio-amide {⋯H-N-C=S}(2) synthon and mol-ecules are consolidated into the crystal structure via C-H⋯O inter-actions.Entities:
Year: 2007 PMID: 21200907 PMCID: PMC2915386 DOI: 10.1107/S1600536807067360
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C10H12N2O3S | |
| Triclinic, | |
| Hall symbol: -P 1 | Mo |
| Cell parameters from 4435 reflections | |
| θ = 2.6–29.2º | |
| µ = 0.28 mm−1 | |
| α = 111.414 (4)º | |
| β = 97.877 (5)º | Block, yellow |
| γ = 94.130 (5)º | 0.30 × 0.18 × 0.10 mm |
| Rigaku AFC12κ/SATURN724 diffractometer | 2221 independent reflections |
| Radiation source: fine-focus sealed tube | 2103 reflections with |
| Monochromator: graphite | |
| θmax = 26.0º | |
| ω scans | θmin = 2.7º |
| Absorption correction: multi-scan(ABSCOR; Higashi, 1995) | |
| 3875 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H-atom parameters constrained | |
| | |
| (Δ/σ)max < 0.001 | |
| 2221 reflections | Δρmax = 0.29 e Å−3 |
| 145 parameters | Δρmin = −0.24 e Å−3 |
| Primary atom site location: structure-invariant direct methods | Extinction correction: none |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| S1 | 0.55527 (11) | 0.09264 (11) | 0.23408 (8) | 0.0271 (2) | |
| O1 | 0.2493 (3) | 0.2303 (3) | 0.3002 (2) | 0.0227 (4) | |
| O2 | −0.4727 (3) | 0.3762 (3) | −0.1315 (2) | 0.0369 (6) | |
| O3 | −0.3181 (3) | 0.3892 (3) | −0.2947 (2) | 0.0391 (6) | |
| N1 | 0.2838 (3) | 0.1543 (3) | 0.0701 (2) | 0.0238 (5) | |
| H1N | 0.3503 | 0.1049 | 0.0042 | 0.029* | |
| N2 | −0.3330 (3) | 0.3620 (3) | −0.1846 (3) | 0.0268 (6) | |
| C1 | 0.3532 (4) | 0.1629 (4) | 0.2037 (3) | 0.0215 (6) | |
| C2 | 0.1242 (4) | 0.2101 (4) | 0.0165 (3) | 0.0216 (6) | |
| C3 | −0.0289 (4) | 0.2438 (4) | 0.0835 (3) | 0.0247 (6) | |
| H3 | −0.0301 | 0.2328 | 0.1737 | 0.030* | |
| C4 | −0.1797 (4) | 0.2937 (4) | 0.0174 (3) | 0.0241 (6) | |
| H4 | −0.2850 | 0.3168 | 0.0618 | 0.029* | |
| C5 | −0.1743 (4) | 0.3091 (4) | −0.1142 (3) | 0.0218 (6) | |
| C6 | −0.0249 (4) | 0.2768 (4) | −0.1820 (3) | 0.0255 (6) | |
| H6 | −0.0240 | 0.2889 | −0.2719 | 0.031* | |
| C7 | 0.1240 (4) | 0.2261 (4) | −0.1162 (3) | 0.0256 (6) | |
| H7 | 0.2279 | 0.2018 | −0.1621 | 0.031* | |
| C8 | 0.3146 (4) | 0.2614 (4) | 0.4537 (3) | 0.0244 (6) | |
| H8 | 0.4509 | 0.2935 | 0.4777 | 0.029* | |
| C9 | 0.2226 (5) | 0.4141 (4) | 0.5385 (3) | 0.0306 (7) | |
| H9A | 0.2637 | 0.5168 | 0.5193 | 0.046* | |
| H9B | 0.2557 | 0.4388 | 0.6419 | 0.046* | |
| H9C | 0.0891 | 0.3852 | 0.5088 | 0.046* | |
| C10 | 0.2626 (5) | 0.0986 (4) | 0.4801 (3) | 0.0331 (7) | |
| H10A | 0.3280 | 0.0054 | 0.4248 | 0.050* | |
| H10B | 0.1300 | 0.0627 | 0.4494 | 0.050* | |
| H10C | 0.2962 | 0.1218 | 0.5833 | 0.050* |
| S1 | 0.0270 (4) | 0.0355 (4) | 0.0209 (4) | 0.0135 (3) | 0.0040 (3) | 0.0115 (3) |
| O1 | 0.0240 (10) | 0.0282 (11) | 0.0172 (10) | 0.0079 (8) | 0.0036 (8) | 0.0095 (8) |
| O2 | 0.0287 (12) | 0.0482 (15) | 0.0355 (13) | 0.0145 (11) | 0.0051 (10) | 0.0161 (11) |
| O3 | 0.0336 (13) | 0.0576 (16) | 0.0340 (13) | 0.0068 (11) | −0.0020 (10) | 0.0294 (12) |
| N1 | 0.0260 (13) | 0.0285 (13) | 0.0176 (12) | 0.0101 (10) | 0.0044 (10) | 0.0083 (10) |
| N2 | 0.0272 (14) | 0.0238 (13) | 0.0262 (13) | 0.0006 (10) | −0.0026 (11) | 0.0089 (11) |
| C1 | 0.0269 (15) | 0.0216 (14) | 0.0161 (13) | 0.0057 (12) | 0.0023 (11) | 0.0072 (11) |
| C2 | 0.0229 (14) | 0.0199 (14) | 0.0184 (14) | 0.0013 (11) | −0.0002 (11) | 0.0049 (11) |
| C3 | 0.0262 (15) | 0.0313 (16) | 0.0191 (14) | 0.0066 (12) | 0.0029 (11) | 0.0125 (12) |
| C4 | 0.0235 (15) | 0.0253 (15) | 0.0238 (15) | 0.0058 (12) | 0.0072 (12) | 0.0082 (12) |
| C5 | 0.0233 (14) | 0.0183 (14) | 0.0209 (14) | 0.0007 (11) | −0.0039 (11) | 0.0071 (11) |
| C6 | 0.0303 (16) | 0.0275 (16) | 0.0190 (14) | 0.0029 (12) | 0.0032 (12) | 0.0097 (12) |
| C7 | 0.0234 (15) | 0.0310 (16) | 0.0228 (15) | 0.0062 (12) | 0.0056 (12) | 0.0098 (13) |
| C8 | 0.0256 (15) | 0.0311 (16) | 0.0175 (14) | 0.0065 (12) | 0.0014 (11) | 0.0109 (12) |
| C9 | 0.0358 (17) | 0.0305 (17) | 0.0258 (16) | 0.0099 (14) | 0.0080 (13) | 0.0093 (13) |
| C10 | 0.0429 (19) | 0.0363 (18) | 0.0262 (16) | 0.0100 (15) | 0.0087 (14) | 0.0171 (14) |
| S1—C1 | 1.678 (3) | C4—H4 | 0.9500 |
| O1—C1 | 1.314 (3) | C5—C6 | 1.373 (4) |
| O1—C8 | 1.479 (3) | C6—C7 | 1.383 (4) |
| O2—N2 | 1.224 (3) | C6—H6 | 0.9500 |
| O3—N2 | 1.231 (3) | C7—H7 | 0.9500 |
| N1—C1 | 1.352 (3) | C8—C10 | 1.508 (4) |
| N1—C2 | 1.413 (4) | C8—C9 | 1.517 (4) |
| N1—H1N | 0.8800 | C8—H8 | 1.0000 |
| N2—C5 | 1.470 (4) | C9—H9A | 0.9800 |
| C2—C7 | 1.394 (4) | C9—H9B | 0.9800 |
| C2—C3 | 1.395 (4) | C9—H9C | 0.9800 |
| C3—C4 | 1.391 (4) | C10—H10A | 0.9800 |
| C3—H3 | 0.9500 | C10—H10B | 0.9800 |
| C4—C5 | 1.387 (4) | C10—H10C | 0.9800 |
| C1—O1—C8 | 119.8 (2) | C5—C6—H6 | 120.9 |
| C1—N1—C2 | 131.9 (2) | C7—C6—H6 | 120.9 |
| C1—N1—H1N | 114.0 | C6—C7—C2 | 121.1 (3) |
| C2—N1—H1N | 114.0 | C6—C7—H7 | 119.4 |
| O2—N2—O3 | 123.5 (3) | C2—C7—H7 | 119.4 |
| O2—N2—C5 | 118.7 (2) | O1—C8—C10 | 109.3 (2) |
| O3—N2—C5 | 117.8 (2) | O1—C8—C9 | 105.0 (2) |
| O1—C1—N1 | 113.7 (2) | C10—C8—C9 | 112.9 (3) |
| O1—C1—S1 | 126.2 (2) | O1—C8—H8 | 109.8 |
| N1—C1—S1 | 120.2 (2) | C10—C8—H8 | 109.8 |
| C7—C2—C3 | 119.6 (3) | C9—C8—H8 | 109.8 |
| C7—C2—N1 | 115.1 (3) | C8—C9—H9A | 109.5 |
| C3—C2—N1 | 125.2 (3) | C8—C9—H9B | 109.5 |
| C4—C3—C2 | 119.6 (3) | H9A—C9—H9B | 109.5 |
| C4—C3—H3 | 120.2 | C8—C9—H9C | 109.5 |
| C2—C3—H3 | 120.2 | H9A—C9—H9C | 109.5 |
| C5—C4—C3 | 119.0 (3) | H9B—C9—H9C | 109.5 |
| C5—C4—H4 | 120.5 | C8—C10—H10A | 109.5 |
| C3—C4—H4 | 120.5 | C8—C10—H10B | 109.5 |
| C6—C5—C4 | 122.4 (3) | H10A—C10—H10B | 109.5 |
| C6—C5—N2 | 118.3 (3) | C8—C10—H10C | 109.5 |
| C4—C5—N2 | 119.4 (3) | H10A—C10—H10C | 109.5 |
| C5—C6—C7 | 118.2 (3) | H10B—C10—H10C | 109.5 |
| C8—O1—C1—N1 | −175.0 (2) | O2—N2—C5—C6 | 173.7 (3) |
| C8—O1—C1—S1 | 4.4 (4) | O3—N2—C5—C6 | −6.1 (4) |
| C2—N1—C1—O1 | 2.6 (4) | O2—N2—C5—C4 | −6.4 (4) |
| C2—N1—C1—S1 | −176.8 (3) | O3—N2—C5—C4 | 173.8 (3) |
| C1—N1—C2—C7 | 162.0 (3) | C4—C5—C6—C7 | 0.4 (4) |
| C1—N1—C2—C3 | −19.9 (5) | N2—C5—C6—C7 | −179.7 (3) |
| C7—C2—C3—C4 | −0.2 (4) | C5—C6—C7—C2 | −0.8 (4) |
| N1—C2—C3—C4 | −178.3 (3) | C3—C2—C7—C6 | 0.7 (4) |
| C2—C3—C4—C5 | −0.1 (4) | N1—C2—C7—C6 | 178.9 (3) |
| C3—C4—C5—C6 | 0.0 (4) | C1—O1—C8—C10 | −87.1 (3) |
| C3—C4—C5—N2 | −179.9 (3) | C1—O1—C8—C9 | 151.5 (3) |
| H··· | ||||
| N1—H1n···S1i | 0.88 | 2.59 | 3.440 (2) | 162 |
| C7—H7···O2ii | 0.95 | 2.48 | 3.204 (4) | 133 |
| C8—H8···O3iii | 1.00 | 2.50 | 3.275 (4) | 134 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N1—H1n⋯S1i | 0.88 | 2.59 | 3.440 (2) | 162 |
| C7—H7⋯O2ii | 0.95 | 2.48 | 3.204 (4) | 133 |
| C8—H8⋯O3iii | 1.00 | 2.50 | 3.275 (4) | 134 |
Symmetry codes: (i) ; (ii) ; (iii) .