Literature DB >> 21200900

Triethyl-ammonium N'-(benzyl-sulfanylthio-carbonyl)-2-hydroxy-benzohydrazidate.

Mamata Singh, Ajay K Srivastava, N K Singh, Anuraag Shrivastav, R K Sharma.   

Abstract

In the title compound, C(6)H(16)N(+)·C(15)H(13)N(2)O(2)S(2) (-), the thione S atom is in a cis configuration with respect to the phenyl and benzene rings, while it adopts a trans configuration with respect to the carbonyl group. The dihedral angle between the benzene and phenyl rings is 78.81 (2)°. The mol-ecular conformation is stabilized by intra-molecular O-H⋯O and N-H⋯S hydrogen bonds, while inter-molecular N-H⋯O, N-H⋯N and weak C-H⋯O inter-actions help to stabilize the crystal structure.

Entities:  

Year:  2007        PMID: 21200900      PMCID: PMC2915380          DOI: 10.1107/S1600536807067037

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related literature, see: Scovill et al. (1982 ▶, 1984 ▶); West et al. (1989 ▶); Gou et al. (1990 ▶); Abu-Raquabah et al. (1992 ▶); Marchi et al. (1990 ▶); Ali & Livingston, (1974 ▶); Wu et al. (2000); Boga et al. (1990 ▶).

Experimental

Crystal data

C6H16N+·C15n class="Species">H13N2O2S2 − M = 419.59 Orthorhombic, a = 10.7109 (4) Å b = 18.6807 (6) Å c = 22.1814 (7) Å V = 4438.2 (3) Å3 Z = 8 Mo Kα radiation μ = 0.26 mm−1 T = 173 (2) K 0.08 × 0.08 × 0.05 mm

Data collection

Nonius KappaCCD diffractometer Absorption correction: none 26195 measured reflections 3928 independent reflections 2542 reflections with I > 2σ(I) R int = 0.138

Refinement

R[F 2 > 2σ(F 2)] = 0.056 wR(F 2) = 0.118 S = 1.05 3928 reflections 257 parameters H-atom parameters constrained Δρmax = 0.34 e Å−3 Δρmin = −0.23 e Å−3 Data collection: COLLECT (Nonius, 1998 ▶); cell refinement: SCALEPACK (Otwinowski & Minor, 1997 ▶); data reduction: DENZO (Otwinowski & Minor 1997 ▶) and SCALEPACK; program(s) used to solve structure: SIR97 (Altomare et al., 1999); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536807067037/lh2550sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536807067037/lh2550Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C6H16N+·C15H13N2O2S2Dx = 1.256 Mg m3
Mr = 419.59Melting point: 418 K
Orthorhombic, PbcaMo Kα radiation λ = 0.71073 Å
Hall symbol: -P 2ac 2abCell parameters from 16320 reflections
a = 10.7109 (4) Åθ = 1.0–26.0º
b = 18.6807 (6) ŵ = 0.26 mm1
c = 22.1814 (7) ÅT = 173 (2) K
V = 4438.2 (3) Å3Chip, yellow
Z = 80.08 × 0.08 × 0.05 mm
F000 = 1792
Nonius KappaCCD diffractometer2542 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.138
Monochromator: horizonally mounted graphite crystalθmax = 25.0º
T = 173(2) Kθmin = 2.4º
φ scans and ω scans with κ offsetsh = −12→12
Absorption correction: nonek = −22→20
26195 measured reflectionsl = −26→26
3928 independent reflections
Refinement on F2H-atom parameters constrained
Least-squares matrix: full  w = 1/[σ2(Fo2) + (0.033P)2 + 3.4211P] where P = (Fo2 + 2Fc2)/3
R[F2 > 2σ(F2)] = 0.056(Δ/σ)max < 0.001
wR(F2) = 0.118Δρmax = 0.34 e Å3
S = 1.05Δρmin = −0.23 e Å3
3928 reflectionsExtinction correction: none
257 parameters
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
S10.15592 (9)0.33158 (5)−0.05488 (4)0.0436 (2)
S20.34667 (8)0.44725 (4)−0.01971 (4)0.0380 (2)
O10.5287 (2)0.23266 (12)0.22154 (10)0.0454 (6)
H10.46380.22590.20100.068*
O20.3691 (2)0.25376 (12)0.13887 (10)0.0427 (6)
N10.3824 (2)0.35026 (14)0.07825 (12)0.0351 (7)
H1A0.41520.39280.07190.042*
N20.2880 (2)0.32553 (13)0.04023 (11)0.0335 (6)
C10.5386 (3)0.33468 (16)0.15530 (13)0.0302 (7)
C20.5870 (3)0.29257 (17)0.20199 (14)0.0348 (8)
C30.6992 (3)0.31114 (19)0.22951 (15)0.0434 (9)
H30.73130.28250.26130.052*
C40.7638 (3)0.3707 (2)0.21095 (16)0.0462 (9)
H40.84080.38260.22970.055*
C50.7178 (3)0.41331 (19)0.16532 (15)0.0431 (9)
H50.76270.45460.15280.052*
C60.6067 (3)0.39574 (17)0.13812 (15)0.0376 (8)
H60.57510.42560.10700.045*
C70.4235 (3)0.31073 (17)0.12389 (14)0.0332 (8)
C80.2719 (3)0.36876 (16)−0.00578 (14)0.0320 (7)
C90.1697 (3)0.38403 (17)−0.12303 (14)0.0395 (8)
H9A0.25050.4097−0.12200.047*
H9B0.17190.3509−0.15790.047*
C100.0678 (3)0.43768 (17)−0.13339 (14)0.0355 (8)
C110.0125 (4)0.4435 (2)−0.18983 (16)0.0501 (10)
H110.03580.4115−0.22120.060*
C12−0.0765 (4)0.4959 (2)−0.20057 (19)0.0637 (12)
H12−0.11350.4995−0.23940.076*
C13−0.1118 (4)0.5423 (2)−0.1562 (2)0.0597 (11)
H13−0.17230.5782−0.16410.072*
C14−0.0587 (4)0.53656 (19)−0.09972 (17)0.0498 (10)
H14−0.08330.5684−0.06850.060*
C150.0300 (3)0.48471 (17)−0.08859 (15)0.0394 (8)
H150.06590.4812−0.04950.047*
N30.1590 (3)0.18429 (14)0.07791 (13)0.0420 (7)
H3A0.21450.22240.08070.050*
C160.1821 (3)0.14954 (19)0.01787 (16)0.0476 (9)
H16A0.13110.10550.01490.057*
H16B0.15490.1825−0.01460.057*
C170.3143 (4)0.1311 (2)0.0086 (2)0.0683 (12)
H17A0.36630.17300.01730.102*
H17B0.32710.1163−0.03330.102*
H17C0.33740.09190.03570.102*
C180.1836 (3)0.13709 (19)0.13117 (17)0.0498 (10)
H18A0.17160.16550.16840.060*
H18B0.27210.12180.13000.060*
C190.1015 (4)0.0707 (2)0.13475 (18)0.0589 (11)
H19A0.01370.08510.13770.088*
H19B0.12430.04260.17040.088*
H19C0.11350.04160.09850.088*
C200.0303 (4)0.2161 (2)0.07594 (17)0.0527 (10)
H20A0.02300.24610.03930.063*
H20B−0.03130.17680.07250.063*
C21−0.0019 (4)0.2601 (2)0.1287 (2)0.0746 (13)
H21A−0.00680.22950.16450.112*
H21B−0.08270.28330.12200.112*
H21C0.06250.29670.13470.112*
U11U22U33U12U13U23
S10.0456 (5)0.0354 (5)0.0496 (5)−0.0055 (4)−0.0148 (5)0.0072 (4)
S20.0395 (5)0.0281 (4)0.0464 (5)−0.0009 (4)−0.0008 (4)0.0027 (4)
O10.0535 (16)0.0388 (14)0.0439 (14)−0.0102 (12)−0.0090 (12)0.0085 (11)
O20.0475 (15)0.0396 (13)0.0410 (13)−0.0169 (12)−0.0066 (11)0.0058 (11)
N10.0346 (16)0.0280 (14)0.0427 (16)−0.0063 (12)−0.0066 (13)0.0005 (12)
N20.0323 (16)0.0312 (15)0.0371 (15)−0.0019 (12)−0.0062 (12)−0.0018 (12)
C10.0301 (18)0.0315 (17)0.0289 (17)−0.0010 (15)0.0045 (14)−0.0056 (14)
C20.038 (2)0.0342 (18)0.0325 (18)−0.0005 (15)0.0032 (15)−0.0045 (15)
C30.041 (2)0.048 (2)0.041 (2)0.0036 (17)−0.0057 (17)−0.0026 (17)
C40.032 (2)0.057 (2)0.050 (2)−0.0019 (18)−0.0008 (18)−0.0114 (19)
C50.037 (2)0.045 (2)0.047 (2)−0.0115 (17)0.0063 (17)−0.0070 (17)
C60.042 (2)0.038 (2)0.0331 (19)−0.0028 (16)0.0044 (16)−0.0010 (15)
C70.035 (2)0.0324 (18)0.0322 (18)0.0019 (15)−0.0003 (15)−0.0051 (15)
C80.0289 (18)0.0287 (17)0.0384 (18)0.0060 (14)0.0033 (15)−0.0024 (15)
C90.045 (2)0.0400 (19)0.0338 (18)0.0037 (17)−0.0032 (16)−0.0013 (15)
C100.0373 (19)0.0338 (18)0.0354 (19)−0.0067 (15)−0.0019 (16)0.0044 (15)
C110.062 (3)0.046 (2)0.043 (2)0.001 (2)−0.0073 (19)0.0019 (17)
C120.077 (3)0.056 (3)0.058 (3)0.011 (2)−0.025 (2)0.017 (2)
C130.059 (3)0.043 (2)0.078 (3)0.010 (2)−0.002 (2)0.014 (2)
C140.054 (3)0.041 (2)0.054 (2)0.0064 (19)0.009 (2)0.0055 (18)
C150.041 (2)0.040 (2)0.0371 (19)−0.0008 (17)0.0039 (16)0.0043 (16)
N30.0357 (16)0.0339 (15)0.0564 (18)−0.0110 (13)0.0012 (15)−0.0074 (14)
C160.051 (2)0.040 (2)0.052 (2)−0.0060 (18)−0.0023 (19)−0.0038 (18)
C170.053 (3)0.066 (3)0.086 (3)−0.002 (2)0.005 (2)−0.018 (2)
C180.046 (2)0.051 (2)0.053 (2)−0.0111 (18)−0.0063 (19)−0.0081 (18)
C190.062 (3)0.057 (3)0.058 (3)−0.016 (2)−0.007 (2)0.006 (2)
C200.046 (2)0.053 (2)0.059 (2)−0.0035 (19)−0.001 (2)−0.0003 (19)
C210.076 (3)0.068 (3)0.080 (3)0.013 (2)0.008 (3)−0.021 (2)
S1—C81.793 (3)C12—H120.9500
S1—C91.807 (3)C13—C141.379 (5)
S2—C81.699 (3)C13—H130.9500
O1—C21.353 (4)C14—C151.379 (5)
O1—H10.8400C14—H140.9500
O2—C71.258 (4)C15—H150.9500
N1—C71.328 (4)N3—C181.498 (4)
N1—N21.395 (3)N3—C201.502 (4)
N1—H1A0.8800N3—C161.502 (4)
N2—C81.313 (4)N3—H3A0.9300
C1—C21.400 (4)C16—C171.471 (5)
C1—C61.407 (4)C16—H16A0.9900
C1—C71.485 (4)C16—H16B0.9900
C2—C31.392 (5)C17—H17A0.9800
C3—C41.374 (5)C17—H17B0.9800
C3—H30.9500C17—H17C0.9800
C4—C51.379 (5)C18—C191.523 (5)
C4—H40.9500C18—H18A0.9900
C5—C61.374 (4)C18—H18B0.9900
C5—H50.9500C19—H19A0.9800
C6—H60.9500C19—H19B0.9800
C9—C101.499 (4)C19—H19C0.9800
C9—H9A0.9900C20—C211.470 (5)
C9—H9B0.9900C20—H20A0.9900
C10—C151.387 (4)C20—H20B0.9900
C10—C111.389 (5)C21—H21A0.9800
C11—C121.387 (5)C21—H21B0.9800
C11—H110.9500C21—H21C0.9800
C12—C131.365 (6)
C8—S1—C9103.99 (15)C13—C14—C15120.1 (4)
C2—O1—H1109.5C13—C14—H14120.0
C7—N1—N2121.1 (3)C15—C14—H14120.0
C7—N1—H1A119.4C14—C15—C10121.2 (3)
N2—N1—H1A119.4C14—C15—H15119.4
C8—N2—N1111.2 (3)C10—C15—H15119.4
C2—C1—C6117.7 (3)C18—N3—C20114.7 (3)
C2—C1—C7119.0 (3)C18—N3—C16114.6 (3)
C6—C1—C7123.2 (3)C20—N3—C16107.3 (3)
O1—C2—C3117.7 (3)C18—N3—H3A106.6
O1—C2—C1122.1 (3)C20—N3—H3A106.6
C3—C2—C1120.3 (3)C16—N3—H3A106.6
C4—C3—C2120.4 (3)C17—C16—N3112.5 (3)
C4—C3—H3119.8C17—C16—H16A109.1
C2—C3—H3119.8N3—C16—H16A109.1
C3—C4—C5120.5 (3)C17—C16—H16B109.1
C3—C4—H4119.8N3—C16—H16B109.1
C5—C4—H4119.8H16A—C16—H16B107.8
C6—C5—C4119.6 (3)C16—C17—H17A109.5
C6—C5—H5120.2C16—C17—H17B109.5
C4—C5—H5120.2H17A—C17—H17B109.5
C5—C6—C1121.6 (3)C16—C17—H17C109.5
C5—C6—H6119.2H17A—C17—H17C109.5
C1—C6—H6119.2H17B—C17—H17C109.5
O2—C7—N1121.2 (3)N3—C18—C19114.8 (3)
O2—C7—C1121.0 (3)N3—C18—H18A108.6
N1—C7—C1117.8 (3)C19—C18—H18A108.6
N2—C8—S2127.6 (2)N3—C18—H18B108.6
N2—C8—S1109.0 (2)C19—C18—H18B108.6
S2—C8—S1123.40 (18)H18A—C18—H18B107.6
C10—C9—S1115.5 (2)C18—C19—H19A109.5
C10—C9—H9A108.4C18—C19—H19B109.5
S1—C9—H9A108.4H19A—C19—H19B109.5
C10—C9—H9B108.4C18—C19—H19C109.5
S1—C9—H9B108.4H19A—C19—H19C109.5
H9A—C9—H9B107.5H19B—C19—H19C109.5
C15—C10—C11118.2 (3)C21—C20—N3114.4 (3)
C15—C10—C9121.7 (3)C21—C20—H20A108.7
C11—C10—C9120.0 (3)N3—C20—H20A108.7
C12—C11—C10120.2 (4)C21—C20—H20B108.7
C12—C11—H11119.9N3—C20—H20B108.7
C10—C11—H11119.9H20A—C20—H20B107.6
C13—C12—C11121.0 (4)C20—C21—H21A109.5
C13—C12—H12119.5C20—C21—H21B109.5
C11—C12—H12119.5H21A—C21—H21B109.5
C12—C13—C14119.4 (4)C20—C21—H21C109.5
C12—C13—H13120.3H21A—C21—H21C109.5
C14—C13—H13120.3H21B—C21—H21C109.5
C7—N1—N2—C8−172.4 (3)C9—S1—C8—N2−167.1 (2)
C6—C1—C2—O1−179.7 (3)C9—S1—C8—S212.3 (2)
C7—C1—C2—O1−3.5 (4)C8—S1—C9—C10−105.5 (3)
C6—C1—C2—C3−0.5 (4)S1—C9—C10—C1548.7 (4)
C7—C1—C2—C3175.7 (3)S1—C9—C10—C11−134.3 (3)
O1—C2—C3—C4178.9 (3)C15—C10—C11—C120.9 (5)
C1—C2—C3—C4−0.3 (5)C9—C10—C11—C12−176.2 (3)
C2—C3—C4—C50.7 (5)C10—C11—C12—C13−0.2 (6)
C3—C4—C5—C6−0.3 (5)C11—C12—C13—C14−0.6 (6)
C4—C5—C6—C1−0.6 (5)C12—C13—C14—C150.6 (6)
C2—C1—C6—C50.9 (5)C13—C14—C15—C100.1 (5)
C7—C1—C6—C5−175.1 (3)C11—C10—C15—C14−0.9 (5)
N2—N1—C7—O2−8.7 (5)C9—C10—C15—C14176.2 (3)
N2—N1—C7—C1169.2 (3)C18—N3—C16—C17−64.9 (4)
C2—C1—C7—O20.4 (4)C20—N3—C16—C17166.6 (3)
C6—C1—C7—O2176.4 (3)C20—N3—C18—C1962.5 (4)
C2—C1—C7—N1−177.5 (3)C16—N3—C18—C19−62.2 (4)
C6—C1—C7—N1−1.5 (4)C18—N3—C20—C2158.6 (4)
N1—N2—C8—S2−2.5 (4)C16—N3—C20—C21−172.9 (3)
N1—N2—C8—S1176.84 (19)
D—H···AD—HH···AD···AD—H···A
O1—H1···O20.841.792.538 (3)147
N1—H1A···S20.882.392.855 (3)114
N3—H3A···O20.932.182.929 (3)137
N3—H3A···N20.932.273.094 (4)148
C9—H9A···S20.992.593.200 (3)120
C21—H21A···O1i0.982.563.377 (5)141
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O1—H1⋯O20.841.792.538 (3)147
N1—H1A⋯S20.882.392.855 (3)114
N3—H3A⋯O20.932.182.929 (3)137
N3—H3A⋯N20.932.273.094 (4)148
C9—H9A⋯S20.992.593.200 (3)120
C21—H21A⋯O1i0.982.563.377 (5)141

Symmetry code: (i) .

  3 in total

1.  SHELXL: high-resolution refinement.

Authors:  G M Sheldrick; T R Schneider
Journal:  Methods Enzymol       Date:  1997       Impact factor: 1.600

2.  2-Acetylpyridine thiosemicarbazones. 4. Complexes with transition metals as antimalarial and antileukemic agents.

Authors:  J P Scovill; D L Klayman; C F Franchino
Journal:  J Med Chem       Date:  1982-10       Impact factor: 7.446

3.  2-Acetylpyridine thiosemicarbazones. 9. Derivatives of 2-acetylpyridine 1-oxide as potential antimalarial agents.

Authors:  J P Scovill; D L Klayman; C Lambros; G E Childs; J D Notsch
Journal:  J Med Chem       Date:  1984-01       Impact factor: 7.446

  3 in total

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