Euphorbia factor L(8): a diterpenoid from the seeds of Euphorbia lathyris.

THE TITLE COMPOUND [SYSTEMATIC NAME: (2S*,3S*,4R*,5R*,9S*,11S*,15R*)-5,15-diacet-oxy-3-nicotino-yloxy-14-oxolathyra-6(17),12(E)-diene], C(30)H(37)NO(7), was isolated from the seeds of Euphorbia lathyris. The tricyclic diterpenoid molecule contains an 11-membered ring, a five-membered ring exhibiting an envelope conformation and a three-membered ring. The 11-membered ring is cis-fused with the three-membered ring and trans-fused with the five-membered ring.

Related literature

For related literature, see: Appendino et al. (1999 ▶); Fujiwara et al. (1996 ▶); Kupchan et al. (1976 ▶); the Pharmacopoeia Commission of the People’s Republic of China (2005 ▶).

Experimental

Crystal data

C30H37NO7

M = 523.61

Orthorhombic,

a = 10.162 (6) Å

b = 15.249 (5) Å

c = 18.802 (9) Å

V = 2914 (2) Å3

Z = 4

Mo Kα radiation

μ = 0.08 mm−1

T = 298 (2) K

0.36 × 0.34 × 0.25 mm

Data collection

Enraf–Nonius CAD-4 diffractometer

Absorption correction: none

3444 measured reflections

3065 independent reflections

1462 reflections with I > 2σ(I)

R int = 0.003

3 standard reflections every 300 reflections intensity decay: 0.3%

Refinement

R[F 2 > 2σ(F 2)] = 0.049

wR(F 2) = 0.118

S = 0.93

3065 reflections

354 parameters

H-atom parameters constrained

Δρmax = 0.18 e Å−3

Δρmin = −0.24 e Å−3

Data collection: DIFRAC (Gabe & White, 1993 ▶); cell refinement: DIFRAC; data reduction: NRCVAX (Gabe et al., 1989 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 1997 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶); software used to prepare material for publication: SHELXL97.

Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536807066901/ww2099sup1.cif

Structure factors: contains datablocks I. DOI: 10.1107/S1600536807066901/ww2099Isup2.hkl

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

C30H37NO7	Dx = 1.194 Mg m−3
Mr = 523.61	Melting point: 469(1) K
Orthorhombic, P212121	Mo Kα radiation λ = 0.71073 Å
Hall symbol: P 2ac 2ab	Cell parameters from 24 reflections
a = 10.162 (6) Å	θ = 4.5–5.5º
b = 15.249 (5) Å	µ = 0.08 mm−1
c = 18.802 (9) Å	T = 298 (2) K
V = 2914 (2) Å3	Block, colourless
Z = 4	0.36 × 0.34 × 0.25 mm
F000 = 1120

Enraf–Nonius CAD-4 diffractometer	Rint = 0.003
Radiation source: fine-focus sealed tube	θmax = 25.5º
Monochromator: graphite	θmin = 1.7º
T = 298(2) K	h = −1→12
ω/2θ scans	k = −3→18
Absorption correction: none	l = −1→22
3444 measured reflections	3 standard reflections
3065 independent reflections	every 300 reflections
1462 reflections with I > 2σ(I)	intensity decay: 0.3%

Refinement on F2	Secondary atom site location: difference Fourier map
Least-squares matrix: full	Hydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.049	H-atom parameters constrained
wR(F2) = 0.118	w = 1/[σ2(Fo2) + (0.0541P)2] where P = (Fo2 + 2Fc2)/3
S = 0.93	(Δ/σ)max < 0.001
3065 reflections	Δρmax = 0.18 e Å−3
354 parameters	Δρmin = −0.24 e Å−3
Primary atom site location: structure-invariant direct methods	Extinction correction: none

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.

Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

	x	y	z	Uiso*/Ueq
O1	0.4410 (3)	0.60363 (17)	0.75057 (16)	0.0422 (8)
O2	0.3383 (4)	0.6889 (2)	0.67028 (18)	0.0745 (12)
O3	0.6027 (3)	0.50915 (17)	0.86366 (15)	0.0442 (8)
O4	0.5648 (4)	0.4774 (2)	0.97859 (19)	0.0725 (11)
O5	0.6858 (4)	0.6902 (2)	0.97413 (16)	0.0600 (10)
O6	0.6894 (4)	0.63864 (19)	0.68532 (16)	0.0539 (9)
O7	0.6709 (5)	0.4992 (3)	0.6477 (2)	0.0887 (14)
N1	0.3198 (5)	0.3782 (2)	0.6543 (2)	0.0653 (13)
C1	0.4680 (5)	0.6336 (3)	0.9021 (2)	0.0463 (13)
H1A	0.4056	0.5857	0.8985	0.071 (7)*
H1B	0.4675	0.6552	0.9506	0.071 (7)*
C2	0.4308 (5)	0.7065 (3)	0.8509 (2)	0.0465 (12)
H2	0.4703	0.7610	0.8684	0.045 (5)*
C3	0.5024 (5)	0.6806 (3)	0.7833 (2)	0.0401 (12)
H3	0.5082	0.7297	0.7498	0.045 (5)*
C4	0.6377 (5)	0.6534 (3)	0.8103 (2)	0.0405 (12)
H4	0.6821	0.7076	0.8246	0.045 (5)*
C5	0.7290 (5)	0.6088 (3)	0.7565 (2)	0.0441 (12)
H5	0.7175	0.5451	0.7596	0.045 (5)*
C6	0.8749 (5)	0.6304 (3)	0.7607 (3)	0.0491 (14)
C7	0.9639 (6)	0.5689 (4)	0.7203 (3)	0.0763 (18)
H7A	1.0510	0.5950	0.7184	0.071 (7)*
H7B	0.9318	0.5648	0.6718	0.071 (7)*
C8	0.9773 (6)	0.4764 (4)	0.7498 (3)	0.0732 (17)
H8A	0.8901	0.4547	0.7612	0.071 (7)*
H8B	1.0129	0.4391	0.7127	0.071 (7)*
C9	1.0623 (6)	0.4677 (4)	0.8146 (3)	0.0686 (15)
H9	1.1538	0.4847	0.8055	0.045 (5)*
C10	1.0512 (6)	0.3977 (4)	0.8693 (3)	0.0697 (17)
C11	1.0173 (5)	0.4919 (3)	0.8887 (3)	0.0586 (16)
H11	1.0834	0.5220	0.9178	0.045 (5)*
C12	0.8824 (5)	0.5235 (3)	0.8982 (2)	0.0454 (12)
H12	0.8184	0.4984	0.8693	0.064 (7)*
C13	0.8419 (5)	0.5850 (3)	0.9442 (2)	0.0446 (12)
C14	0.7110 (5)	0.6257 (3)	0.9385 (2)	0.0443 (12)
C15	0.6070 (5)	0.6020 (3)	0.8815 (2)	0.0410 (12)
C16	0.2825 (5)	0.7213 (3)	0.8442 (3)	0.0612 (15)
H16A	0.2414	0.6687	0.8271	0.129 (6)*
H16B	0.2661	0.7683	0.8115	0.129 (6)*
H16C	0.2468	0.7361	0.8899	0.129 (6)*
C17	0.9201 (6)	0.7006 (4)	0.7918 (3)	0.0720 (16)
H17A	1.0093	0.7138	0.7894	0.089 (15)*
H17B	0.8631	0.7374	0.8164	0.089 (15)*
C18	0.9437 (7)	0.3300 (4)	0.8661 (3)	0.090 (2)
H18A	0.9760	0.2784	0.8426	0.129 (6)*
H18B	0.8702	0.3532	0.8401	0.129 (6)*
H18C	0.9164	0.3153	0.9134	0.129 (6)*
C19	1.1778 (7)	0.3627 (5)	0.9013 (4)	0.112 (3)
H19A	1.2163	0.3207	0.8694	0.129 (6)*
H19B	1.1591	0.3350	0.9460	0.129 (6)*
H19C	1.2382	0.4102	0.9086	0.129 (6)*
C20	0.9313 (6)	0.6255 (3)	0.9990 (3)	0.0698 (16)
H20A	0.9596	0.6822	0.9829	0.129 (6)*
H20B	1.0067	0.5885	1.0059	0.129 (6)*
H20C	0.8847	0.6316	1.0431	0.129 (6)*
C21	0.3664 (5)	0.6179 (3)	0.6929 (3)	0.0453 (12)
C22	0.3204 (5)	0.5350 (3)	0.6607 (2)	0.0411 (12)
C23	0.2381 (5)	0.5386 (3)	0.6026 (3)	0.0531 (13)
H23	0.2099	0.5925	0.5852	0.064 (7)*
C24	0.1981 (6)	0.4628 (4)	0.5708 (3)	0.0655 (15)
H24	0.1428	0.4639	0.5314	0.064 (7)*
C25	0.2414 (6)	0.3849 (4)	0.5984 (3)	0.0697 (17)
H25	0.2141	0.3334	0.5764	0.064 (7)*
C26	0.3572 (5)	0.4531 (3)	0.6841 (3)	0.0511 (13)
H26	0.4121	0.4500	0.7236	0.064 (7)*
C27	0.6664 (6)	0.5762 (4)	0.6360 (3)	0.0630 (16)
C28	0.6346 (7)	0.6157 (4)	0.5654 (2)	0.089 (2)
H28A	0.6076	0.5703	0.5332	0.129 (6)*
H28B	0.7111	0.6447	0.5469	0.129 (6)*
H28C	0.5646	0.6575	0.5709	0.129 (6)*
C29	0.5746 (5)	0.4539 (3)	0.9179 (3)	0.0548 (13)
C30	0.5620 (7)	0.3613 (3)	0.8920 (4)	0.085 (2)
H30A	0.5472	0.3230	0.9318	0.129 (6)*
H30B	0.6414	0.3444	0.8681	0.129 (6)*
H30C	0.4891	0.3572	0.8597	0.129 (6)*

	U11	U22	U33	U12	U13	U23
O1	0.043 (2)	0.0396 (17)	0.0435 (17)	−0.0049 (17)	−0.0102 (19)	−0.0047 (16)
O2	0.093 (3)	0.0434 (18)	0.088 (3)	−0.003 (2)	−0.046 (3)	0.0091 (19)
O3	0.046 (2)	0.0370 (17)	0.0495 (18)	−0.0018 (16)	0.0047 (19)	−0.0033 (15)
O4	0.087 (3)	0.067 (2)	0.063 (2)	0.003 (2)	0.026 (3)	0.013 (2)
O5	0.070 (3)	0.0543 (18)	0.0553 (18)	0.013 (2)	−0.012 (2)	−0.0226 (17)
O6	0.059 (2)	0.065 (2)	0.0376 (17)	0.0056 (19)	0.004 (2)	−0.0063 (17)
O7	0.119 (4)	0.076 (3)	0.072 (2)	0.003 (3)	0.004 (3)	−0.026 (2)
N1	0.080 (4)	0.044 (2)	0.072 (3)	0.000 (3)	−0.014 (3)	−0.010 (2)
C1	0.043 (3)	0.046 (3)	0.050 (3)	−0.001 (2)	0.006 (3)	−0.006 (2)
C2	0.042 (3)	0.044 (3)	0.054 (3)	0.001 (3)	0.000 (3)	−0.010 (2)
C3	0.032 (3)	0.040 (3)	0.049 (3)	−0.003 (2)	−0.002 (3)	−0.001 (2)
C4	0.037 (3)	0.044 (2)	0.040 (2)	−0.007 (2)	0.001 (3)	−0.005 (2)
C5	0.046 (3)	0.052 (3)	0.034 (3)	0.002 (3)	0.007 (3)	0.001 (2)
C6	0.036 (3)	0.068 (3)	0.044 (3)	0.003 (3)	0.004 (3)	0.008 (3)
C7	0.055 (4)	0.107 (5)	0.067 (4)	0.016 (4)	0.019 (4)	0.004 (4)
C8	0.061 (4)	0.094 (4)	0.065 (3)	0.024 (4)	0.013 (4)	−0.018 (3)
C9	0.038 (3)	0.096 (4)	0.072 (4)	0.016 (4)	0.006 (3)	−0.008 (4)
C10	0.056 (4)	0.079 (4)	0.074 (4)	0.026 (4)	0.002 (4)	−0.009 (3)
C11	0.042 (4)	0.067 (4)	0.067 (3)	0.011 (3)	−0.005 (3)	−0.016 (3)
C12	0.039 (3)	0.052 (3)	0.046 (3)	−0.004 (3)	−0.003 (3)	−0.005 (2)
C13	0.042 (3)	0.050 (3)	0.042 (3)	0.008 (3)	0.001 (3)	−0.004 (2)
C14	0.052 (4)	0.043 (3)	0.037 (3)	0.001 (3)	0.004 (3)	−0.002 (3)
C15	0.046 (3)	0.035 (2)	0.042 (3)	0.000 (2)	0.004 (3)	−0.007 (2)
C16	0.037 (3)	0.075 (3)	0.072 (4)	0.010 (3)	−0.002 (3)	−0.007 (3)
C17	0.036 (4)	0.097 (4)	0.082 (4)	−0.013 (4)	0.006 (4)	0.011 (4)
C18	0.098 (5)	0.074 (4)	0.097 (4)	0.020 (4)	0.012 (5)	−0.023 (3)
C19	0.092 (6)	0.132 (6)	0.111 (5)	0.060 (5)	−0.011 (5)	−0.021 (5)
C20	0.061 (4)	0.073 (3)	0.075 (3)	0.006 (3)	−0.017 (4)	−0.026 (3)
C21	0.046 (3)	0.042 (3)	0.048 (3)	0.002 (3)	−0.008 (3)	−0.002 (3)
C22	0.039 (3)	0.039 (2)	0.046 (3)	0.002 (3)	−0.002 (3)	−0.002 (2)
C23	0.053 (4)	0.053 (3)	0.053 (3)	0.004 (3)	−0.006 (3)	0.000 (3)
C24	0.073 (4)	0.071 (3)	0.053 (3)	0.002 (4)	−0.029 (3)	−0.014 (3)
C25	0.082 (5)	0.058 (4)	0.069 (3)	−0.015 (4)	−0.016 (4)	−0.025 (3)
C26	0.051 (3)	0.050 (3)	0.052 (3)	0.000 (3)	−0.014 (3)	−0.002 (2)
C27	0.058 (4)	0.079 (4)	0.052 (3)	0.009 (4)	0.007 (3)	−0.016 (3)
C28	0.104 (5)	0.117 (5)	0.045 (3)	0.003 (5)	−0.004 (4)	−0.006 (3)
C29	0.044 (3)	0.044 (3)	0.077 (4)	−0.004 (3)	0.007 (3)	0.007 (3)
C30	0.085 (5)	0.045 (3)	0.126 (5)	−0.011 (4)	0.011 (5)	−0.004 (3)

O1—C21	1.340 (5)	C10—C11	1.522 (7)
O1—C3	1.465 (5)	C11—C12	1.463 (7)
O2—C21	1.198 (5)	C11—H11	0.9800
O3—C29	1.354 (6)	C12—C13	1.341 (6)
O3—C15	1.457 (5)	C12—H12	0.9300
O4—C29	1.199 (6)	C13—C14	1.471 (7)
O5—C14	1.217 (5)	C13—C20	1.507 (7)
O6—C27	1.349 (6)	C14—C15	1.547 (6)
O6—C5	1.470 (5)	C16—H16A	0.9600
O7—C27	1.196 (6)	C16—H16B	0.9600
N1—C25	1.323 (6)	C16—H16C	0.9600
N1—C26	1.328 (5)	C17—H17A	0.9300
C1—C2	1.518 (6)	C17—H17B	0.9300
C1—C15	1.542 (6)	C18—H18A	0.9600
C1—H1A	0.9700	C18—H18B	0.9600
C1—H1B	0.9700	C18—H18C	0.9600
C2—C3	1.516 (6)	C19—H19A	0.9600
C2—C16	1.529 (7)	C19—H19B	0.9600
C2—H2	0.9800	C19—H19C	0.9600
C3—C4	1.523 (6)	C20—H20A	0.9600
C3—H3	0.9800	C20—H20B	0.9600
C4—C5	1.532 (6)	C20—H20C	0.9600
C4—C15	1.582 (6)	C21—C22	1.478 (6)
C4—H4	0.9800	C22—C26	1.375 (6)
C5—C6	1.521 (7)	C22—C23	1.377 (6)
C5—H5	0.9800	C23—C24	1.364 (6)
C6—C17	1.303 (7)	C23—H23	0.9300
C6—C7	1.508 (7)	C24—C25	1.368 (7)
C7—C8	1.521 (7)	C24—H24	0.9300
C7—H7A	0.9700	C25—H25	0.9300
C7—H7B	0.9700	C26—H26	0.9300
C8—C9	1.500 (7)	C27—C28	1.492 (7)
C8—H8A	0.9700	C28—H28A	0.9600
C8—H8B	0.9700	C28—H28B	0.9600
C9—C10	1.487 (7)	C28—H28C	0.9600
C9—C11	1.513 (7)	C29—C30	1.499 (7)
C9—H9	0.9800	C30—H30A	0.9600
C10—C18	1.504 (8)	C30—H30B	0.9600
C10—C19	1.518 (8)	C30—H30C	0.9600
C21—O1—C3	116.8 (3)	O5—C14—C13	119.4 (5)
C29—O3—C15	115.9 (3)	O5—C14—C15	115.2 (4)
C27—O6—C5	117.0 (4)	C13—C14—C15	124.7 (4)
C25—N1—C26	116.1 (4)	O3—C15—C1	109.5 (4)
C2—C1—C15	107.4 (4)	O3—C15—C14	114.0 (4)
C2—C1—H1A	110.2	C1—C15—C14	112.4 (4)
C15—C1—H1A	110.2	O3—C15—C4	106.9 (3)
C2—C1—H1B	110.2	C1—C15—C4	103.7 (4)
C15—C1—H1B	110.2	C14—C15—C4	109.6 (4)
H1A—C1—H1B	108.5	C2—C16—H16A	109.5
C3—C2—C1	102.8 (3)	C2—C16—H16B	109.5
C3—C2—C16	116.3 (4)	H16A—C16—H16B	109.5
C1—C2—C16	113.9 (4)	C2—C16—H16C	109.5
C3—C2—H2	107.8	H16A—C16—H16C	109.5
C1—C2—H2	107.8	H16B—C16—H16C	109.5
C16—C2—H2	107.8	C6—C17—H17A	120.0
O1—C3—C2	110.9 (4)	C6—C17—H17B	120.0
O1—C3—C4	107.8 (3)	H17A—C17—H17B	120.0
C2—C3—C4	103.0 (4)	C10—C18—H18A	109.5
O1—C3—H3	111.6	C10—C18—H18B	109.5
C2—C3—H3	111.6	H18A—C18—H18B	109.5
C4—C3—H3	111.6	C10—C18—H18C	109.5
C3—C4—C5	116.6 (4)	H18A—C18—H18C	109.5
C3—C4—C15	103.8 (4)	H18B—C18—H18C	109.5
C5—C4—C15	117.3 (4)	C10—C19—H19A	109.5
C3—C4—H4	106.1	C10—C19—H19B	109.5
C5—C4—H4	106.1	H19A—C19—H19B	109.5
C15—C4—H4	106.1	C10—C19—H19C	109.5
O6—C5—C6	104.4 (4)	H19A—C19—H19C	109.5
O6—C5—C4	107.3 (4)	H19B—C19—H19C	109.5
C6—C5—C4	117.4 (4)	C13—C20—H20A	109.5
O6—C5—H5	109.2	C13—C20—H20B	109.5
C6—C5—H5	109.2	H20A—C20—H20B	109.5
C4—C5—H5	109.2	C13—C20—H20C	109.5
C17—C6—C7	121.7 (5)	H20A—C20—H20C	109.5
C17—C6—C5	123.0 (5)	H20B—C20—H20C	109.5
C7—C6—C5	115.1 (5)	O2—C21—O1	124.7 (4)
C6—C7—C8	116.5 (4)	O2—C21—C22	123.5 (4)
C6—C7—H7A	108.2	O1—C21—C22	111.8 (4)
C8—C7—H7A	108.2	C26—C22—C23	117.1 (4)
C6—C7—H7B	108.2	C26—C22—C21	124.0 (4)
C8—C7—H7B	108.2	C23—C22—C21	118.8 (4)
H7A—C7—H7B	107.3	C24—C23—C22	119.6 (5)
C9—C8—C7	115.4 (5)	C24—C23—H23	120.2
C9—C8—H8A	108.4	C22—C23—H23	120.2
C7—C8—H8A	108.4	C23—C24—C25	118.3 (5)
C9—C8—H8B	108.4	C23—C24—H24	120.9
C7—C8—H8B	108.4	C25—C24—H24	120.9
H8A—C8—H8B	107.5	N1—C25—C24	124.2 (5)
C10—C9—C8	125.6 (5)	N1—C25—H25	117.9
C10—C9—C11	61.0 (3)	C24—C25—H25	117.9
C8—C9—C11	123.5 (5)	N1—C26—C22	124.6 (4)
C10—C9—H9	112.5	N1—C26—H26	117.7
C8—C9—H9	112.5	C22—C26—H26	117.7
C11—C9—H9	112.5	O7—C27—O6	124.0 (5)
C9—C10—C18	121.3 (5)	O7—C27—C28	124.7 (5)
C9—C10—C19	117.5 (6)	O6—C27—C28	111.4 (5)
C18—C10—C19	113.0 (5)	C27—C28—H28A	109.5
C9—C10—C11	60.4 (4)	C27—C28—H28B	109.5
C18—C10—C11	119.6 (5)	H28A—C28—H28B	109.5
C19—C10—C11	115.4 (5)	C27—C28—H28C	109.5
C12—C11—C9	118.4 (5)	H28A—C28—H28C	109.5
C12—C11—C10	123.5 (5)	H28B—C28—H28C	109.5
C9—C11—C10	58.7 (3)	O4—C29—O3	123.3 (4)
C12—C11—H11	114.9	O4—C29—C30	125.7 (5)
C9—C11—H11	114.9	O3—C29—C30	111.0 (5)
C10—C11—H11	114.9	C29—C30—H30A	109.5
C13—C12—C11	126.6 (5)	C29—C30—H30B	109.5
C13—C12—H12	116.7	H30A—C30—H30B	109.5
C11—C12—H12	116.7	C29—C30—H30C	109.5
C12—C13—C14	121.7 (4)	H30A—C30—H30C	109.5
C12—C13—C20	122.9 (5)	H30B—C30—H30C	109.5
C14—C13—C20	115.0 (4)