Literature DB >> 21200885

2-Benzyl-isoindoline-1,3-dione: a monoclinic polymorph.

Zhou Jiang1, Jun-Dong Wang, Nai-Sheng Chen, Jin-Ling Huang.   

Abstract

In the molecule of the title compound, C(15)H(11)NO(2), the dihedral angle between the ring systems is 81.3 (2)°. In the crystal structure, mol-ecules are held together via C-H⋯O inter-actions.

Entities:  

Year:  2007        PMID: 21200885      PMCID: PMC2915367          DOI: 10.1107/S1600536807065336

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the crystal structure of the triclinic form, see: Warzecha, Lex & Griesbeck (2006 ▶). For related literature, see: Warzecha, Görner & Griesbeck (2006 ▶); Orzeszko et al. (2000 ▶).

Experimental

Crystal data

C15H11NO2 M = 237.25 Monoclinic, a = 8.8324 (6) Å b = 5.3656 (4) Å c = 25.1926 (18) Å β = 98.851 (3)° V = 1179.69 (15) Å3 Z = 4 Mo Kα radiation μ = 0.09 mm−1 T = 298 (2) K 0.8 × 0.2 × 0.1 mm

Data collection

Rigaku R-AXIS RAPID IP diffractometer Absorption correction: none 3668 measured reflections 2083 independent reflections 1439 reflections with I > 2σ(I) R int = 0.048

Refinement

R[F 2 > 2σ(F 2)] = 0.097 wR(F 2) = 0.192 S = 1.26 2083 reflections 208 parameters All H-atom parameters refined Δρmax = 0.24 e Å−3 Δρmin = −0.19 e Å−3 Data collection: RAPID-AUTO (Rigaku, 2006 ▶); cell refinement: RAPID-AUTO; data reduction: RAPID-AUTO; program(s) used to solve structure: SHELXS97 (Sheldrick, 1997 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997 ▶); molecular graphics: ORTEX (McArdle, 1995 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536807065336/tk2231sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536807065336/tk2231Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C15H11N1O2F000 = 496
Mr = 237.25Dx = 1.336 Mg m3
Monoclinic, P21/nMo Kα radiation λ = 0.71069 Å
Hall symbol: -P 2ynCell parameters from 3962 reflections
a = 8.8324 (6) Åθ = 1.2–25.0º
b = 5.3656 (4) ŵ = 0.09 mm1
c = 25.1926 (18) ÅT = 298 (2) K
β = 98.851 (3)ºNeedle, colorless
V = 1179.69 (15) Å30.8 × 0.2 × 0.1 mm
Z = 4
Rigaku R-AXIS RAPID IP diffractometer1439 reflections with I > 2σ(I)
Radiation source: Rigaku rotating anode generatorRint = 0.048
Monochromator: Graphite Monochromatorθmax = 25.0º
T = 298(2) Kθmin = 1.6º
ω scansh = −10→9
Absorption correction: nonek = −6→6
3668 measured reflectionsl = −29→13
2083 independent reflections
Refinement on F2Hydrogen site location: inferred from neighbouring sites
Least-squares matrix: fullAll H-atom parameters refined
R[F2 > 2σ(F2)] = 0.097  w = 1/[σ2(Fo2) + (0.0216P)2 + 2.0256P] where P = (Fo2 + 2Fc2)/3
wR(F2) = 0.192(Δ/σ)max < 0.001
S = 1.26Δρmax = 0.24 e Å3
2083 reflectionsΔρmin = −0.19 e Å3
208 parametersExtinction correction: SHELXL97 (Sheldrick, 1997), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.008 (2)
Secondary atom site location: difference Fourier map
Experimental. collimator diameter: 0.800000 mm
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O20.5810 (4)0.7318 (7)0.08609 (13)0.0656 (10)
N10.7327 (4)1.0824 (8)0.09212 (14)0.0520 (11)
O10.8908 (4)1.4018 (7)0.07261 (13)0.0679 (11)
H10.579 (6)0.595 (10)−0.030 (2)0.081*
H50.631 (6)1.076 (10)0.1573 (18)0.070 (15)*
H101.040 (6)1.130 (11)0.309 (2)0.085*
H40.895 (6)1.300 (11)−0.042 (2)0.085*
H60.717 (7)1.326 (13)0.149 (2)0.11 (2)*
H110.834 (6)1.292 (12)0.244 (2)0.10 (2)*
H91.167 (6)0.743 (11)0.291 (2)0.090 (18)*
H20.666 (6)0.677 (11)−0.112 (2)0.082 (17)*
H30.815 (6)1.037 (10)−0.120 (2)0.081 (16)*
H81.099 (7)0.588 (12)0.204 (2)0.10 (2)*
H70.905 (7)0.729 (12)0.140 (2)0.115*
C10.7860 (5)1.0946 (9)0.00582 (17)0.0476 (12)
C20.6932 (5)0.8927 (9)0.00966 (17)0.0483 (12)
C30.6470 (6)0.7357 (11)−0.0330 (2)0.0599 (14)
C40.6984 (7)0.7930 (12)−0.0809 (2)0.0670 (15)
C50.7910 (6)0.9958 (12)−0.0849 (2)0.0676 (16)
C60.8377 (6)1.1518 (11)−0.0419 (2)0.0600 (14)
C70.8157 (5)1.2218 (9)0.05865 (18)0.0495 (12)
C80.6581 (5)0.8804 (10)0.06590 (18)0.0509 (12)
C90.7296 (7)1.1484 (13)0.1487 (2)0.0620 (14)
C100.8568 (5)1.0365 (9)0.18740 (17)0.0495 (12)
C110.8977 (7)1.1438 (12)0.2375 (2)0.0652 (15)
C121.0108 (8)1.0414 (13)0.2747 (2)0.0787 (19)
C131.0886 (7)0.8336 (13)0.2625 (2)0.0744 (17)
C141.0491 (7)0.7241 (13)0.2137 (2)0.0711 (16)
C150.9351 (6)0.8245 (10)0.1757 (2)0.0581 (13)
U11U22U33U12U13U23
O20.069 (2)0.063 (2)0.066 (2)−0.012 (2)0.0146 (17)0.0088 (19)
N10.058 (2)0.052 (3)0.046 (2)0.001 (2)0.0091 (18)−0.002 (2)
O10.073 (2)0.054 (2)0.077 (2)−0.012 (2)0.0135 (18)−0.015 (2)
C10.045 (2)0.041 (3)0.056 (3)0.003 (2)0.007 (2)0.004 (2)
C20.048 (2)0.049 (3)0.047 (2)0.008 (2)0.0045 (19)0.005 (2)
C30.058 (3)0.064 (4)0.056 (3)−0.003 (3)0.004 (2)−0.002 (3)
C40.075 (4)0.068 (4)0.057 (3)0.004 (3)0.008 (3)−0.008 (3)
C50.070 (3)0.083 (4)0.052 (3)0.013 (3)0.016 (3)0.008 (3)
C60.058 (3)0.064 (4)0.060 (3)0.000 (3)0.017 (2)0.006 (3)
C70.048 (3)0.041 (3)0.059 (3)0.005 (2)0.004 (2)−0.004 (2)
C80.049 (3)0.051 (3)0.053 (3)0.004 (3)0.005 (2)0.004 (3)
C90.069 (3)0.064 (4)0.055 (3)0.010 (3)0.017 (2)−0.005 (3)
C100.060 (3)0.047 (3)0.045 (2)−0.007 (3)0.017 (2)0.001 (2)
C110.080 (4)0.065 (4)0.052 (3)−0.005 (3)0.014 (3)−0.008 (3)
C120.101 (5)0.088 (5)0.044 (3)−0.017 (4)0.002 (3)−0.005 (3)
C130.074 (4)0.080 (5)0.067 (4)−0.002 (4)0.004 (3)0.013 (4)
C140.072 (4)0.067 (4)0.074 (4)0.007 (3)0.011 (3)0.003 (3)
C150.064 (3)0.055 (3)0.056 (3)−0.001 (3)0.012 (2)−0.001 (3)
O2—C81.210 (5)C6—H40.94 (6)
N1—C81.383 (6)C9—C101.496 (7)
N1—C71.413 (6)C9—H51.01 (5)
N1—C91.473 (6)C9—H60.96 (7)
O1—C71.193 (5)C10—C111.383 (6)
C1—C21.371 (6)C10—C151.386 (7)
C1—C61.384 (6)C11—C121.376 (8)
C1—C71.483 (6)C11—H111.00 (6)
C2—C31.377 (7)C12—C131.370 (8)
C2—C81.498 (6)C12—H100.99 (5)
C3—C41.388 (7)C13—C141.359 (8)
C3—H10.98 (5)C13—H91.04 (6)
C4—C51.374 (8)C14—C151.385 (7)
C4—H21.00 (5)C14—H80.91 (6)
C5—C61.382 (7)C15—H71.03 (6)
C5—H30.97 (5)
C8—N1—C7112.5 (4)N1—C8—C2105.3 (4)
C8—N1—C9124.9 (4)N1—C9—C10114.2 (4)
C7—N1—C9122.6 (4)N1—C9—H5105 (3)
C2—C1—C6121.1 (4)C10—C9—H5107 (3)
C2—C1—C7109.0 (4)N1—C9—H6105 (4)
C6—C1—C7129.8 (5)C10—C9—H6118 (4)
C1—C2—C3122.5 (4)H5—C9—H6106 (5)
C1—C2—C8108.3 (4)C11—C10—C15117.8 (5)
C3—C2—C8129.2 (5)C11—C10—C9119.5 (5)
C2—C3—C4116.5 (5)C15—C10—C9122.7 (4)
C2—C3—H1122 (3)C12—C11—C10121.1 (6)
C4—C3—H1122 (3)C12—C11—H11124 (3)
C5—C4—C3121.1 (5)C10—C11—H11114 (3)
C5—C4—H2123 (3)C13—C12—C11120.5 (6)
C3—C4—H2116 (3)C13—C12—H10121 (3)
C4—C5—C6122.1 (5)C11—C12—H10118 (3)
C4—C5—H3117 (3)C14—C13—C12119.2 (6)
C6—C5—H3120 (3)C14—C13—H9118 (3)
C5—C6—C1116.7 (5)C12—C13—H9122 (3)
C5—C6—H4127 (3)C13—C14—C15121.0 (6)
C1—C6—H4116 (3)C13—C14—H8122 (4)
O1—C7—N1124.6 (4)C15—C14—H8117 (4)
O1—C7—C1130.6 (5)C14—C15—C10120.4 (5)
N1—C7—C1104.8 (4)C14—C15—H7118 (3)
O2—C8—N1125.0 (4)C10—C15—H7122 (3)
O2—C8—C2129.7 (5)
D—H···AD—HH···AD···AD—H···A
C15—H7···O1i1.03 (6)2.43 (6)3.425 (6)161 (5)
C3—H1···O2ii0.98 (5)2.54 (5)3.363 (7)142 (4)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C15—H7⋯O1i1.03 (6)2.43 (6)3.425 (6)161 (5)
C3—H1⋯O2ii0.98 (5)2.54 (5)3.363 (7)142 (4)

Symmetry codes: (i) ; (ii) .

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