Literature DB >> 21200853

(+)-(1S,5R,10S)-11,11-Dimeth-yl-4-oxa-tricyclo-[8.4.0.0]tetra-deca-ne-3,12-dione.

Judith C Gallucci1, Kohei Inomata, Robert D Dura, Leo A Paquette.   

Abstract

The title compound, C(15)H(22)O(3), was prepared via amino-acid-promoted Robinson annulation followed by tandem Pd/C-mediated hydrogenation and oxidative cyclization. This product was instrumental in determining the feasibility of a stereocontrolled hydrogenation in which the directing hydroxyl group is adjacent to the 6-7-ring network and its olefinic component. The asymmetric unit consists of a single mol-ecule with normal geometric parameters. The absolute configuration was assigned based on the known enanti-omeric prescursor. Inter-molecular C-H⋯O inter-actions link each mol-ecule with four neighboring mol-ecules.

Entities:  

Year:  2007        PMID: 21200853      PMCID: PMC2915339          DOI: 10.1107/S1600536807066159

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related chemistry, see: Brown (1987 ▶); Crabtree & Davis (1986 ▶); Inomata et al. (2005 ▶), Nagamine et al. (2007 ▶); Peng et al. (2004 ▶); Stork & Kahne (1983 ▶). For related literature on geometry, see: Allen et al. (1987 ▶); Desiraju & Steiner (1999 ▶); Steiner & Saenger (1992 ▶); Taylor & Kennard (1982 ▶).

Experimental

Crystal data

C15H22O3 M = 250.33 Trigonal, a = 7.6239 (10) Å c = 38.064 (5) Å V = 1916.0 (4) Å3 Z = 6 Mo Kα radiation μ = 0.09 mm−1 T = 150 (2) K 0.35 × 0.27 × 0.19 mm

Data collection

Nonius KappaCCD diffractometer Absorption correction: none 23396 measured reflections 1130 independent reflections 1023 reflections with I > 2σ(I) R int = 0.038

Refinement

R[F 2 > 2σ(F 2)] = 0.026 wR(F 2) = 0.057 S = 1.06 1130 reflections 165 parameters 1 restraint H-atom parameters constrained Δρmax = 0.11 e Å−3 Δρmin = −0.14 e Å−3 Data collection: COLLECT (Nonius, 1997–2000 ▶); cell refinement: HKL SCALEPACK (Otwinowski & Minor 1997 ▶); data reduction: HKL DENZO (Otwinowski & Minor 1997 ▶) and SCALEPACK; program(s) used to solve structure: SHELXS86 (Sheldrick, 1990 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶) and SHELXTL (Bruker, 1999 ▶); software used to prepare material for publication: WinGX publication routines (Farrugia, 1999 ▶). Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536807066159/sq2007sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536807066159/sq2007Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C15H22O3Z = 6
Mr = 250.33F000 = 816
Trigonal, P65Dx = 1.302 Mg m3
Hall symbol: P 65Mo Kα radiation λ = 0.71073 Å
a = 7.6239 (10) ÅCell parameters from 2164 reflections
b = 7.6239 (10) Åθ = 2.0–25.0º
c = 38.064 (5) ŵ = 0.09 mm1
α = 90ºT = 150 (2) K
β = 90ºChunk, colorless
γ = 120º0.35 × 0.27 × 0.19 mm
V = 1916.0 (4) Å3
Nonius KappaCCD diffractometer1023 reflections with I > 2σ(I)
Monochromator: graphiteRint = 0.038
Detector resolution: 9 pixels mm-1θmax = 25.0º
T = 150(2) Kθmin = 3.1º
ω scansh = −9→9
Absorption correction: nonek = −7→7
23396 measured reflectionsl = −44→44
1130 independent reflections
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.026H-atom parameters constrained
wR(F2) = 0.057  w = 1/[σ2(Fo2) + (0.0353P)2 + 0.1114P] where P = (Fo2 + 2Fc2)/3
S = 1.06(Δ/σ)max = 0.001
1130 reflectionsΔρmax = 0.11 e Å3
165 parametersΔρmin = −0.14 e Å3
1 restraintExtinction correction: none
Primary atom site location: structure-invariant direct methods
Experimental. The data collection crystal was a clear, colorless chunk, which was cut from a cluster of crystals. Initial examination of the diffraction pattern on a Nonius Kappa CCD diffractometer indicated a trigonal or hexagonal crystal system. All work was done at 150 K using an Oxford Cryosystems Cryostream Cooler. Omega scans with a frame width of 1.0 degree were used for data collection. Data integration was done with DENZO (Otwinowski & Minor, 1997) and scaling and merging of the data was done with SCALEPACK (Otwinowski & Minor, 1997).The Laue group was determined to be 6/m by XPREP (Bruker Nonius, 2003). The intensity statistics are non-centrosymmetric and the systematic absences restrict the space group possibilities to P61 or P65. The structure was solved by the direct methods procedure in SHELXS86 (Sheldrick, 1990). Full-matrix least-squares refinements based on F2 were performed in SHELXL97 (Sheldrick, 1997), as incorporated in the WinGX package (Farrugia, 1999). The correct enantiomer was chosen based on the known chiral centers at atoms C(1) and C(5).
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C11.1237 (3)0.6294 (3)0.84987 (5)0.0200 (4)
C20.9527 (3)0.4864 (3)0.87492 (5)0.0248 (5)
H2A0.83870.51360.87380.03*
H2B0.90170.34350.86820.03*
C31.0397 (3)0.5250 (3)0.91134 (5)0.0245 (5)
C51.3134 (3)0.7149 (3)0.87446 (5)0.0236 (4)
H51.38520.63870.86880.028*
C61.4721 (3)0.9388 (3)0.87398 (6)0.0273 (5)
H6A1.50730.98160.84920.033*
H6B1.59580.9560.88560.033*
C71.4117 (3)1.0810 (3)0.89168 (6)0.0276 (5)
H7A1.35051.0230.91480.033*
H7B1.5361.21230.89610.033*
C81.2636 (3)1.1208 (3)0.87107 (5)0.0266 (5)
H8A1.33051.19370.84920.032*
H8B1.23181.21050.88510.032*
C91.0656 (3)0.9300 (3)0.86149 (5)0.0234 (5)
H9A0.96850.96970.85250.028*
H9B1.00670.84790.8830.028*
C101.0931 (3)0.7992 (3)0.83360 (5)0.0196 (4)
H101.22460.89280.82180.024*
C110.9294 (3)0.7288 (3)0.80369 (5)0.0204 (4)
C120.9724 (3)0.6034 (3)0.77757 (5)0.0207 (4)
C130.9882 (3)0.4299 (3)0.79298 (5)0.0243 (5)
H13A1.01770.35850.77420.029*
H13B0.85860.33220.80430.029*
C141.1584 (3)0.5144 (3)0.82012 (5)0.0235 (5)
H14A1.28790.60680.80820.028*
H14B1.17020.40120.83030.028*
C150.9500 (3)0.9168 (3)0.78510 (6)0.0289 (5)
H15A0.86830.87560.76360.043*
H15B1.09241.00850.77910.043*
H15C0.90240.98650.80070.043*
C160.7081 (3)0.5997 (3)0.81654 (6)0.0280 (5)
H16A0.68410.46690.82430.042*
H16B0.61530.5820.79730.042*
H16C0.68470.66850.83620.042*
O10.9541 (2)0.4526 (2)0.93853 (4)0.0347 (4)
O21.0008 (2)0.6444 (2)0.74647 (4)0.0259 (3)
O41.2389 (2)0.6617 (2)0.91052 (3)0.0268 (3)
U11U22U33U12U13U23
C10.0192 (11)0.0211 (10)0.0205 (10)0.0106 (9)0.0003 (8)0.0024 (8)
C20.0243 (11)0.0238 (11)0.0249 (12)0.0110 (9)0.0024 (9)0.0042 (9)
C30.0293 (11)0.0244 (11)0.0253 (12)0.0176 (9)0.0048 (10)0.0057 (9)
C50.0249 (11)0.0296 (11)0.0183 (10)0.0152 (9)0.0027 (8)0.0048 (9)
C60.0189 (10)0.0322 (12)0.0288 (12)0.0113 (10)−0.0025 (9)0.0015 (9)
C70.0230 (11)0.0247 (11)0.0277 (12)0.0063 (9)−0.0020 (9)−0.0001 (9)
C80.0309 (12)0.0228 (11)0.0241 (11)0.0119 (9)−0.0014 (9)−0.0025 (9)
C90.0267 (11)0.0262 (11)0.0205 (11)0.0157 (9)0.0013 (9)0.0002 (9)
C100.0182 (10)0.0204 (10)0.0199 (10)0.0095 (8)0.0012 (8)0.0022 (8)
C110.0213 (10)0.0243 (10)0.0181 (10)0.0132 (9)0.0003 (8)0.0008 (8)
C120.0139 (9)0.0225 (11)0.0218 (11)0.0061 (9)−0.0036 (8)−0.0017 (8)
C130.0282 (11)0.0238 (11)0.0230 (11)0.0145 (9)0.0017 (9)−0.0030 (9)
C140.0266 (11)0.0232 (10)0.0247 (11)0.0155 (9)0.0024 (9)0.0037 (9)
C150.0376 (13)0.0335 (11)0.0235 (11)0.0236 (10)−0.0037 (9)−0.0009 (9)
C160.0211 (11)0.0372 (12)0.0261 (12)0.0149 (9)−0.0028 (9)−0.0034 (9)
O10.0416 (9)0.0421 (9)0.0235 (9)0.0231 (8)0.0099 (7)0.0100 (7)
O20.0265 (8)0.0292 (8)0.0196 (8)0.0120 (7)−0.0007 (6)−0.0011 (6)
O40.0269 (8)0.0324 (8)0.0193 (7)0.0135 (7)0.0000 (6)0.0046 (6)
C1—C141.534 (3)C9—C101.541 (3)
C1—C21.542 (3)C9—H9A0.99
C1—C101.554 (3)C9—H9B0.99
C1—C51.565 (3)C10—C111.573 (3)
C2—C31.501 (3)C10—H101
C2—H2A0.99C11—C121.524 (3)
C2—H2B0.99C11—C151.534 (3)
C3—O11.201 (2)C11—C161.547 (3)
C3—O41.345 (2)C12—O21.216 (2)
C5—O41.463 (2)C12—C131.505 (3)
C5—C61.521 (3)C13—C141.527 (3)
C5—H51C13—H13A0.99
C6—C71.530 (3)C13—H13B0.99
C6—H6A0.99C14—H14A0.99
C6—H6B0.99C14—H14B0.99
C7—C81.524 (3)C15—H15A0.98
C7—H7A0.99C15—H15B0.98
C7—H7B0.99C15—H15C0.98
C8—C91.527 (3)C16—H16A0.98
C8—H8A0.99C16—H16B0.98
C8—H8B0.99C16—H16C0.98
C14—C1—C2112.26 (16)C10—C9—H9B109
C14—C1—C10108.82 (16)H9A—C9—H9B107.8
C2—C1—C10114.16 (16)C9—C10—C1112.96 (15)
C14—C1—C5106.98 (16)C9—C10—C11112.20 (15)
C2—C1—C5101.73 (15)C1—C10—C11115.38 (15)
C10—C1—C5112.57 (16)C9—C10—H10105
C3—C2—C1107.32 (16)C1—C10—H10105
C3—C2—H2A110.3C11—C10—H10105
C1—C2—H2A110.3C12—C11—C15109.38 (15)
C3—C2—H2B110.3C12—C11—C16108.37 (16)
C1—C2—H2B110.3C15—C11—C16108.06 (16)
H2A—C2—H2B108.5C12—C11—C10107.64 (14)
O1—C3—O4121.31 (18)C15—C11—C10108.80 (15)
O1—C3—C2128.34 (18)C16—C11—C10114.52 (16)
O4—C3—C2110.34 (16)O2—C12—C13121.53 (18)
O4—C5—C6107.62 (16)O2—C12—C11122.68 (17)
O4—C5—C1107.19 (15)C13—C12—C11115.72 (16)
C6—C5—C1120.72 (16)C12—C13—C14108.53 (16)
O4—C5—H5106.9C12—C13—H13A110
C6—C5—H5106.9C14—C13—H13A110
C1—C5—H5106.9C12—C13—H13B110
C5—C6—C7115.98 (17)C14—C13—H13B110
C5—C6—H6A108.3H13A—C13—H13B108.4
C7—C6—H6A108.3C13—C14—C1112.81 (15)
C5—C6—H6B108.3C13—C14—H14A109
C7—C6—H6B108.3C1—C14—H14A109
H6A—C6—H6B107.4C13—C14—H14B109
C8—C7—C6115.44 (17)C1—C14—H14B109
C8—C7—H7A108.4H14A—C14—H14B107.8
C6—C7—H7A108.4C11—C15—H15A109.5
C8—C7—H7B108.4C11—C15—H15B109.5
C6—C7—H7B108.4H15A—C15—H15B109.5
H7A—C7—H7B107.5C11—C15—H15C109.5
C7—C8—C9114.27 (17)H15A—C15—H15C109.5
C7—C8—H8A108.7H15B—C15—H15C109.5
C9—C8—H8A108.7C11—C16—H16A109.5
C7—C8—H8B108.7C11—C16—H16B109.5
C9—C8—H8B108.7H16A—C16—H16B109.5
H8A—C8—H8B107.6C11—C16—H16C109.5
C8—C9—C10113.03 (17)H16A—C16—H16C109.5
C8—C9—H9A109H16B—C16—H16C109.5
C10—C9—H9A109C3—O4—C5111.59 (15)
C8—C9—H9B109
C14—C1—C2—C3124.11 (17)C5—C1—C10—C11169.82 (15)
C10—C1—C2—C3−111.44 (18)C9—C10—C11—C12179.42 (16)
C5—C1—C2—C310.1 (2)C1—C10—C11—C12−49.3 (2)
C1—C2—C3—O1175.8 (2)C9—C10—C11—C1561.0 (2)
C1—C2—C3—O4−3.3 (2)C1—C10—C11—C15−167.71 (16)
C14—C1—C5—O4−131.22 (17)C9—C10—C11—C16−60.0 (2)
C2—C1—C5—O4−13.32 (19)C1—C10—C11—C1671.3 (2)
C10—C1—C5—O4109.29 (17)C15—C11—C12—O2−5.6 (2)
C14—C1—C5—C6105.2 (2)C16—C11—C12—O2112.0 (2)
C2—C1—C5—C6−136.86 (18)C10—C11—C12—O2−123.67 (19)
C10—C1—C5—C6−14.2 (3)C15—C11—C12—C13171.40 (17)
O4—C5—C6—C7−49.0 (2)C16—C11—C12—C13−71.0 (2)
C1—C5—C6—C774.4 (2)C10—C11—C12—C1353.3 (2)
C5—C6—C7—C8−74.9 (2)O2—C12—C13—C14118.03 (19)
C6—C7—C8—C956.7 (2)C11—C12—C13—C14−59.0 (2)
C7—C8—C9—C10−69.9 (2)C12—C13—C14—C159.0 (2)
C8—C9—C10—C193.9 (2)C2—C1—C14—C1371.8 (2)
C8—C9—C10—C11−133.64 (17)C10—C1—C14—C13−55.6 (2)
C14—C1—C10—C9−177.66 (16)C5—C1—C14—C13−177.43 (16)
C2—C1—C10—C956.1 (2)O1—C3—O4—C5174.92 (18)
C5—C1—C10—C9−59.3 (2)C2—C3—O4—C5−5.8 (2)
C14—C1—C10—C1151.4 (2)C6—C5—O4—C3143.75 (16)
C2—C1—C10—C11−74.9 (2)C1—C5—O4—C312.5 (2)
D—H···AD—HH···AD···AD—H···A
C10—H10···O1i12.703.596 (2)149
C14—H14A···O1i0.992.703.562 (3)146
C2—H2A···O2ii0.992.623.449 (2)141
C9—H9B···O2ii0.992.663.454 (2)138
C5—H5···O2iii12.583.194 (2)119
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C10—H10⋯O1i1.002.703.596 (2)149
C14—H14A⋯O1i0.992.703.562 (3)146
C2—H2A⋯O2ii0.992.623.449 (2)141
C9—H9B⋯O2ii0.992.663.454 (2)138
C5—H5⋯O2iii1.002.583.194 (2)119

Symmetry codes: (i) ; (ii) ; (iii) .

  3 in total

1.  SHELXL: high-resolution refinement.

Authors:  G M Sheldrick; T R Schneider
Journal:  Methods Enzymol       Date:  1997       Impact factor: 1.600

2.  Amino acid mediated intramolecular asymmetric aldol reaction to construct a new chiral bicyclic enedione containing a seven-membered ring: remarkable inversion of enantioselectivity compared to the six-membered ring example.

Authors:  Takashi Nagamine; Kohei Inomata; Yasuyuki Endo; Leo A Paquette
Journal:  J Org Chem       Date:  2007-01-05       Impact factor: 4.354

3.  Diastereoselectivities realized in the amino acid catalyzed aldol cyclizations of triketo acetonides of differing ring size.

Authors:  Kohei Inomata; Matthieu Barragué; Leo A Paquette
Journal:  J Org Chem       Date:  2005-01-21       Impact factor: 4.354

  3 in total

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