Literature DB >> 21200839

2-(9H-Fluoren-9-ylidenemeth-yl)thio-phene.

Lucia Perašínová, Martin Stefko, Daniel Végh, Jozef Kožíšek.   

Abstract

The title compound, C(18)H(12)S, contains a thio-phene ring which is disordered by rotation of 180° about the linking C-C bond. The site occupancies of the major and minor components of the disordered ring are 0.900 (3) and 0.100 (3), respectively. In one of these disordered components, the mol-ecule is stabilized by an intra-molecular C-H⋯S hydrogen bond. The compound was synthesized in good yield (80%) by a modified phase-transfer-catalysed condensation of fluorene with thio-phene-2-carbaldehyde.

Entities:  

Year:  2007        PMID: 21200839      PMCID: PMC2915328          DOI: 10.1107/S1600536807065099

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For a related structure, see: Fave et al., 2004 ▶. For related literature, see: Allen (2002 ▶); Lukeš et al. (2003 ▶); Mullen & Wegner (1998 ▶).

Experimental

Crystal data

C18H12S M = 260.34 Orthorhombic, a = 20.757 (4) Å b = 44.434 (9) Å c = 5.6260 (11) Å V = 5189.0 (18) Å3 Z = 16 Mo Kα radiation μ = 0.23 mm−1 T = 100 (2) K 0.57 × 0.13 × 0.08 mm

Data collection

Oxford Diffraction Gemini R CCD diffractometer Absorption correction: analytical (Clark & Reid, 1995 ▶) T min = 0.938, T max = 0.985 11725 measured reflections 3018 independent reflections 1903 reflections with I > 2σ(I) R int = 0.029

Refinement

R[F 2 > 2σ(F 2)] = 0.035 wR(F 2) = 0.090 S = 0.99 3018 reflections 180 parameters 4 restraints H-atom parameters constrained Δρmax = 0.15 e Å−3 Δρmin = −0.17 e Å−3 Absolute structure: Flack (1983 ▶), 1110 Friedel pairs Flack parameter: −0.07 (8) Data collection: CrysAlis CCD (Oxford Diffraction, 2006 ▶); cell refinement: CrysAlis CCD; data reduction: CrysAlis RED (Oxford Diffraction, 2006 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 1997 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997 ▶); molecular graphics: DIAMOND (Brandenburg, 1998 ▶); software used to prepare material for publication: enCIFer (Allen et al., 2004 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536807065099/fj2086sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536807065099/fj2086Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C18H12SF000 = 2176
Mr = 260.34Dx = 1.333 Mg m3
Orthorhombic, Fdd2Mo Kα radiation λ = 0.71073 Å
Hall symbol: F 2 -2dCell parameters from 4617 reflections
a = 20.757 (4) Åθ = 3.7–29.1º
b = 44.434 (9) ŵ = 0.23 mm1
c = 5.6260 (11) ÅT = 100 (2) K
V = 5189.0 (18) Å3Block, yellow
Z = 160.57 × 0.13 × 0.08 mm
Oxford Diffraction Gemini R CCD diffractometer3018 independent reflections
Radiation source: fine-focus sealed tube1903 reflections with I > 2σ(I)
Monochromator: graphiteRint = 0.029
T = 100(2) Kθmax = 29.1º
Rotation method data acquisition using ω and φ scansθmin = 3.8º
Absorption correction: analytical(Clark & Reid, 1995)h = −27→25
Tmin = 0.938, Tmax = 0.985k = −59→58
11725 measured reflectionsl = −7→7
Refinement on F2Hydrogen site location: inferred from neighbouring sites
Least-squares matrix: fullH-atom parameters constrained
R[F2 > 2σ(F2)] = 0.035  w = 1/[σ2(Fo2) + (0.0485P)2] where P = (Fo2 + 2Fc2)/3
wR(F2) = 0.090(Δ/σ)max < 0.001
S = 0.99Δρmax = 0.15 e Å3
3018 reflectionsΔρmin = −0.17 e Å3
180 parametersExtinction correction: none
4 restraintsAbsolute structure: Flack (1983), 1110 Friedel pairs
Primary atom site location: structure-invariant direct methodsFlack parameter: −0.07 (8)
Secondary atom site location: difference Fourier map
Experimental. face-indexed (CrysAlis RED; Oxford Diffraction, 2006)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/UeqOcc. (<1)
C10.35040 (9)0.03543 (4)−0.1480 (3)0.0504 (5)
C20.40287 (10)0.01668 (4)−0.1107 (4)0.0605 (6)
H2A0.42980.01940.02410.073*
C30.41552 (10)−0.00616 (5)−0.2727 (4)0.0656 (6)
H3A0.4516−0.0189−0.24750.079*
C40.37726 (11)−0.01069 (5)−0.4680 (4)0.0640 (6)
H4A0.3876−0.0262−0.57810.077*
C50.32362 (10)0.00724 (4)−0.5052 (4)0.0594 (5)
H5A0.29650.0040−0.63870.071*
C60.31044 (9)0.02985 (4)−0.3442 (3)0.0490 (5)
C70.25624 (9)0.05093 (4)−0.3394 (3)0.0493 (5)
C80.20399 (10)0.05396 (5)−0.4884 (4)0.0607 (5)
H8A0.19940.0413−0.62370.073*
C90.15827 (11)0.07574 (5)−0.4373 (4)0.0670 (6)
H9A0.12190.0780−0.53800.080*
C100.16522 (10)0.09415 (5)−0.2405 (4)0.0658 (6)
H10A0.13340.1090−0.20790.079*
C110.21746 (10)0.09134 (5)−0.0913 (4)0.0608 (5)
H11A0.22210.10430.04190.073*
C120.26339 (9)0.06932 (4)−0.1380 (3)0.0490 (5)
C130.32372 (9)0.06148 (4)−0.0145 (3)0.0490 (5)
C140.34399 (9)0.07789 (4)0.1761 (3)0.0518 (5)
H14A0.31250.09210.22560.062*
C15A0.40114 (9)0.07913 (4)0.3214 (3)0.0513 (5)0.900 (3)
C18A0.50774 (12)0.07874 (5)0.5125 (5)0.0731 (7)0.900 (3)
H18A0.55130.07590.55920.088*0.900 (3)
C17A0.46607 (12)0.09565 (5)0.6332 (4)0.0670 (6)0.900 (3)
H17A0.47670.10580.77670.080*0.900 (3)
C16A0.4056 (4)0.0970 (4)0.529 (3)0.0747 (14)0.900 (3)
H16A0.37100.10870.59000.090*0.900 (3)
S1A0.47511 (8)0.06280 (3)0.26734 (16)0.0755 (3)0.900 (3)
C15B0.40114 (9)0.07913 (4)0.3214 (3)0.0513 (5)0.100 (3)
C17B0.46607 (12)0.09565 (5)0.6332 (4)0.0670 (6)0.100 (3)
H17B0.47810.10580.77500.080*0.100 (3)
C18B0.50774 (12)0.07874 (5)0.5125 (5)0.0731 (7)0.100 (3)
H18B0.55120.07580.56020.088*0.100 (3)
C16B0.481 (3)0.0659 (10)0.311 (4)0.0755 (3)0.100 (3)
H16B0.50130.05320.19600.091*0.100 (3)
S1B0.3980 (11)0.0978 (10)0.532 (7)0.0747 (14)0.100 (3)
U11U22U33U12U13U23
C10.0532 (11)0.0451 (11)0.0528 (11)−0.0072 (9)0.0047 (9)−0.0017 (9)
C20.0557 (12)0.0503 (12)0.0754 (13)−0.0021 (10)−0.0032 (11)−0.0117 (11)
C30.0575 (12)0.0517 (12)0.0874 (16)0.0001 (10)0.0055 (12)−0.0126 (12)
C40.0699 (14)0.0503 (13)0.0717 (13)−0.0051 (11)0.0093 (13)−0.0153 (12)
C50.0684 (13)0.0544 (12)0.0555 (11)−0.0128 (10)0.0014 (11)−0.0072 (11)
C60.0570 (11)0.0428 (11)0.0473 (10)−0.0082 (9)0.0039 (10)−0.0004 (9)
C70.0542 (11)0.0438 (11)0.0500 (11)−0.0054 (9)0.0035 (9)0.0041 (10)
C80.0657 (13)0.0608 (13)0.0557 (10)−0.0042 (11)−0.0049 (12)0.0017 (11)
C90.0649 (14)0.0688 (15)0.0673 (15)−0.0031 (11)−0.0130 (11)0.0128 (12)
C100.0643 (13)0.0580 (13)0.0750 (14)0.0076 (10)−0.0009 (12)0.0077 (13)
C110.0671 (13)0.0519 (12)0.0634 (12)0.0033 (10)0.0028 (12)−0.0026 (11)
C120.0520 (11)0.0468 (10)0.0483 (11)−0.0047 (9)0.0057 (8)0.0018 (9)
C130.0528 (10)0.0461 (10)0.0482 (11)−0.0072 (9)0.0042 (9)0.0000 (9)
C140.0555 (11)0.0487 (11)0.0513 (11)−0.0028 (9)0.0087 (9)−0.0005 (9)
C15A0.0598 (12)0.0461 (11)0.0480 (11)−0.0100 (9)−0.0005 (9)0.0023 (9)
C18A0.0757 (15)0.0666 (15)0.0771 (14)−0.0061 (12)−0.0193 (14)0.0019 (14)
C17A0.0865 (16)0.0614 (14)0.0531 (12)−0.0118 (13)−0.0108 (12)−0.0052 (12)
C16A0.082 (3)0.0744 (16)0.0680 (12)−0.022 (2)−0.005 (2)0.0022 (11)
S1A0.0667 (6)0.0868 (6)0.0731 (5)0.0098 (4)−0.0143 (4)−0.0252 (5)
C15B0.0598 (12)0.0461 (11)0.0480 (11)−0.0100 (9)−0.0005 (9)0.0023 (9)
C17B0.0865 (16)0.0614 (14)0.0531 (12)−0.0118 (13)−0.0108 (12)−0.0052 (12)
C18B0.0757 (15)0.0666 (15)0.0771 (14)−0.0061 (12)−0.0193 (14)0.0019 (14)
C16B0.0667 (6)0.0868 (6)0.0731 (5)0.0098 (4)−0.0143 (4)−0.0252 (5)
S1B0.082 (3)0.0744 (16)0.0680 (12)−0.022 (2)−0.005 (2)0.0022 (11)
C1—C21.387 (3)C10—C111.377 (3)
C1—C61.403 (3)C10—H10A0.9500
C1—C131.487 (3)C11—C121.391 (3)
C2—C31.389 (3)C11—H11A0.9500
C2—H2A0.9500C12—C131.474 (3)
C3—C41.371 (3)C13—C141.363 (3)
C3—H3A0.9500C14—C15A1.442 (3)
C4—C51.385 (3)C14—H14A0.9500
C4—H4A0.9500C15A—C16A1.416 (19)
C5—C61.380 (3)C15A—S1A1.725 (3)
C5—H5A0.9500C18A—C17A1.332 (3)
C6—C71.464 (3)C18A—S1A1.692 (3)
C7—C81.377 (3)C18A—H18A0.9500
C7—C121.405 (3)C17A—C16A1.388 (3)
C8—C91.386 (3)C17A—H17A0.9500
C8—H8A0.9500C16A—H16A0.9500
C9—C101.384 (3)C16B—H16B0.9500
C9—H9A0.9500
C2—C1—C6118.53 (18)C11—C10—H10A119.5
C2—C1—C13133.10 (18)C9—C10—H10A119.5
C6—C1—C13108.35 (17)C10—C11—C12119.2 (2)
C1—C2—C3119.2 (2)C10—C11—H11A120.4
C1—C2—H2A120.4C12—C11—H11A120.4
C3—C2—H2A120.4C11—C12—C7119.26 (19)
C4—C3—C2121.6 (2)C11—C12—C13131.25 (18)
C4—C3—H3A119.2C7—C12—C13109.45 (17)
C2—C3—H3A119.2C14—C13—C12120.45 (17)
C3—C4—C5120.2 (2)C14—C13—C1134.33 (19)
C3—C4—H4A119.9C12—C13—C1105.19 (16)
C5—C4—H4A119.9C13—C14—C15A136.09 (18)
C6—C5—C4118.6 (2)C13—C14—H14A112.0
C6—C5—H5A120.7C15A—C14—H14A112.0
C4—C5—H5A120.7C16A—C15A—C14122.8 (4)
C5—C6—C1121.84 (18)C16A—C15A—S1A108.9 (4)
C5—C6—C7129.06 (17)C14—C15A—S1A128.03 (14)
C1—C6—C7109.09 (16)C17A—C18A—S1A113.1 (2)
C8—C7—C12121.16 (18)C17A—C18A—H18A123.5
C8—C7—C6131.03 (19)S1A—C18A—H18A123.5
C12—C7—C6107.78 (17)C18A—C17A—C16A113.4 (9)
C7—C8—C9118.8 (2)C18A—C17A—H17A123.3
C7—C8—H8A120.6C16A—C17A—H17A123.3
C9—C8—H8A120.6C17A—C16A—C15A112.5 (12)
C10—C9—C8120.5 (2)C17A—C16A—H16A123.8
C10—C9—H9A119.8C15A—C16A—H16A123.8
C8—C9—H9A119.8C18A—S1A—C15A92.08 (13)
C11—C10—C9121.1 (2)
D—H···AD—HH···AD···AD—H···A
C2—H2A···S1A0.952.553.311 (4)139
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C2—H2A⋯S1A0.952.553.311 (4)139
  2 in total

1.  The Cambridge Structural Database: a quarter of a million crystal structures and rising.

Authors:  Frank H Allen
Journal:  Acta Crystallogr B       Date:  2002-05-29

2.  Connecting pi-chromophores by sigma-P-P bonds: new type of assemblies exhibiting sigma-pi-conjugation.

Authors:  Claire Fave; Muriel Hissler; Tamás Kárpáti; Joëlle Rault-Berthelot; Valérie Deborde; Loic Toupet; László Nyulászi; Régis Réau
Journal:  J Am Chem Soc       Date:  2004-05-19       Impact factor: 15.419

  2 in total

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