Literature DB >> 21200828

N-(4-Amino-phen-yl)-1,8-naphthalimide hemihydrate.

Fang-Fang Jian1, Li-Ming Wang, Li Du, Jing Wang.   

Abstract

The title compound, C(18)H(12)N(2)O(2)·0.5H(2)O, was prepared by the reaction of 1,4-phenyl-enediamine with 1,8-naphthalic anhydride in refluxing dimethyl-formamide. The structure is stabilized by N-H⋯O and O-H⋯O hydrogen bonds. There are π-π stacking inter-actions [centroid-centroid distances of 3.718 (2), 3.510 (2) and 3.546 (2) Å] and C-H⋯π inter-actions between the mol-ecules. The water molecule lies on a twofold rotation axis. Its two H atoms are disordered equally over two positions.

Entities:  

Year:  2007        PMID: 21200828      PMCID: PMC2915319          DOI: 10.1107/S160053680706583X

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related literature, see: Ofir (2006 ▶); Cederfur et al. (2003 ▶); Lavin & Shimizu (2006 ▶).

Experimental

Crystal data

C18H12N2O2·0.5H2O M = 297.31 Orthorhombic, a = 22.926 (5) Å b = 17.930 (4) Å c = 6.836 (1) Å V = 2810 (1) Å3 Z = 8 Mo Kα radiation μ = 0.10 mm−1 T = 295 (2) K 0.40 × 0.40 × 0.20 mm

Data collection

Enraf–Nonius CAD-4 diffractometer Absorption correction: none 5656 measured reflections 1359 independent reflections 1308 reflections with I > 2σ(I) R int = 0.027 3 standard reflections every 200 reflections intensity decay: none

Refinement

R[F 2 > 2σ(F 2)] = 0.069 wR(F 2) = 0.164 S = 1.33 1359 reflections 204 parameters 1 restraint H-atom parameters constrained Δρmax = 0.24 e Å−3 Δρmin = −0.21 e Å−3 Data collection: CAD-4 Software (Enraf–Nonius, 1989 ▶); cell refinement: CAD-4 Software; data reduction: NRCVAX (Gabe et al., 1989 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 1997 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997 ▶); molecular graphics: SHELXTL/PC (Sheldrick, 1990 ▶); software used to prepare material for publication: WinGX (Farrugia, 1999 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S160053680706583X/ez2108sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S160053680706583X/ez2108Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C18H12N2O2·0.5H2ODx = 1.406 Mg m3
Mr = 297.31Melting point: 286 K
Orthorhombic, Aba2Mo Kα radiation λ = 0.71073 Å
Hall symbol: A2 -2acCell parameters from 512 reflections
a = 22.926 (5) Åθ = 2–22º
b = 17.930 (4) ŵ = 0.10 mm1
c = 6.836 (1) ÅT = 295 (2) K
V = 2810 (1) Å3Block, yellow
Z = 80.40 × 0.40 × 0.20 mm
F000 = 1240
Enraf–Nonius CAD-4 diffractometerRint = 0.027
Radiation source: fine-focus sealed tubeθmax = 25.0º
Monochromator: graphiteθmin = 2.3º
T = 295(2) Kh = −27→23
ω scansk = −20→21
Absorption correction: nonel = −8→7
5656 measured reflections3 standard reflections
1359 independent reflections every 200 reflections
1308 reflections with I > 2σ(I) intensity decay: none
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.069H-atom parameters constrained
wR(F2) = 0.164  w = 1/[σ2(Fo2) + (0.062P)2 + 2.2916P] where P = (Fo2 + 2Fc2)/3
S = 1.33(Δ/σ)max < 0.001
1359 reflectionsΔρmax = 0.24 e Å3
204 parametersΔρmin = −0.21 e Å3
1 restraintExtinction correction: none
Primary atom site location: structure-invariant direct methods
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/UeqOcc. (<1)
O10.42928 (16)0.07821 (19)0.8275 (7)0.0704 (12)
O20.27279 (15)0.22571 (18)0.9326 (8)0.0675 (12)
N10.35109 (17)0.15181 (19)0.8761 (6)0.0447 (10)
N20.4972 (2)0.3999 (3)0.9511 (11)0.095 (2)
H2A0.50020.43140.85660.115*
H2B0.51700.40641.05670.115*
C10.2903 (2)0.1646 (3)0.8953 (8)0.0502 (13)
C20.2527 (2)0.0997 (2)0.8651 (7)0.0481 (12)
C30.1932 (2)0.1090 (3)0.8646 (8)0.0609 (15)
H3A0.17720.15630.88000.073*
C40.1569 (3)0.0475 (4)0.8411 (10)0.080 (2)
H4A0.11670.05430.83940.096*
C50.1787 (3)−0.0214 (4)0.8208 (10)0.080 (2)
H5A0.1533−0.06160.80900.096*
C60.2396 (3)−0.0341 (3)0.8168 (9)0.0641 (16)
C70.2649 (4)−0.1041 (3)0.7944 (10)0.082 (2)
H7A0.2409−0.14570.78390.099*
C80.3234 (4)−0.1134 (3)0.7875 (11)0.083 (2)
H8A0.3391−0.16100.77320.100*
C90.3604 (3)−0.0517 (3)0.8017 (9)0.0669 (16)
H9A0.4005−0.05810.79270.080*
C100.3376 (3)0.0183 (3)0.8289 (8)0.0538 (13)
C110.2765 (2)0.0281 (3)0.8369 (8)0.0509 (12)
C120.3765 (2)0.0826 (2)0.8410 (8)0.0512 (13)
C130.3889 (2)0.2158 (3)0.8965 (9)0.0522 (14)
C140.4212 (2)0.2260 (3)1.0623 (10)0.0602 (15)
H14A0.41900.19141.16320.072*
C150.4569 (3)0.2869 (3)1.0813 (11)0.0629 (15)
H15A0.47870.29321.19490.075*
C160.4609 (2)0.3390 (3)0.9330 (10)0.0577 (14)
C170.4289 (2)0.3279 (3)0.7643 (9)0.0565 (14)
H17A0.43190.36190.66190.068*
C180.3928 (2)0.2670 (3)0.7466 (9)0.0544 (14)
H18A0.37100.26030.63320.065*
O1W0.50000.00000.0917 (13)0.089 (2)
H1W10.48300.04210.09660.107*0.50
H2W10.52390.0012−0.00330.107*0.50
U11U22U33U12U13U23
O10.055 (2)0.063 (2)0.094 (3)0.0129 (17)0.011 (3)0.010 (2)
O20.067 (2)0.0447 (18)0.091 (3)0.0124 (16)−0.001 (3)0.000 (2)
N10.053 (2)0.0357 (18)0.046 (2)−0.0006 (16)−0.004 (2)0.0032 (18)
N20.102 (4)0.079 (3)0.106 (5)−0.039 (3)−0.022 (4)0.011 (4)
C10.055 (3)0.045 (2)0.050 (3)0.009 (2)−0.003 (3)0.005 (2)
C20.055 (3)0.055 (2)0.034 (3)−0.004 (2)−0.004 (2)0.010 (2)
C30.063 (3)0.078 (4)0.042 (3)−0.004 (3)−0.004 (3)0.009 (3)
C40.065 (4)0.116 (5)0.060 (4)−0.028 (4)−0.001 (3)0.021 (4)
C50.097 (5)0.087 (4)0.056 (4)−0.044 (4)−0.012 (4)0.018 (4)
C60.090 (5)0.059 (3)0.043 (3)−0.027 (3)−0.005 (3)0.013 (3)
C70.136 (7)0.052 (3)0.058 (4)−0.030 (4)−0.018 (4)0.013 (3)
C80.142 (7)0.042 (3)0.065 (4)0.002 (4)−0.006 (5)−0.001 (3)
C90.102 (4)0.047 (3)0.052 (4)0.008 (3)0.001 (3)0.001 (3)
C100.079 (4)0.037 (2)0.045 (3)0.003 (2)0.006 (3)0.011 (2)
C110.072 (3)0.048 (3)0.032 (2)−0.007 (2)−0.002 (3)0.008 (2)
C120.060 (3)0.043 (3)0.050 (3)0.010 (2)0.001 (3)0.007 (2)
C130.053 (3)0.038 (2)0.066 (4)0.004 (2)0.001 (3)0.004 (3)
C140.063 (3)0.055 (3)0.063 (4)−0.002 (3)−0.015 (3)0.012 (3)
C150.061 (3)0.058 (3)0.071 (4)−0.006 (3)−0.016 (3)−0.003 (3)
C160.053 (3)0.045 (3)0.075 (4)−0.007 (2)0.000 (3)−0.007 (3)
C170.067 (3)0.039 (2)0.063 (4)−0.003 (2)−0.006 (3)0.012 (3)
C180.059 (3)0.044 (3)0.060 (4)0.000 (2)−0.007 (3)0.001 (3)
O1W0.098 (5)0.093 (4)0.078 (4)0.028 (4)0.0000.000
O1—C121.217 (6)C7—H7A0.9300
O2—C11.194 (6)C8—C91.397 (9)
N1—C121.391 (6)C8—H8A0.9300
N1—C11.419 (6)C9—C101.372 (7)
N1—C131.445 (6)C9—H9A0.9300
N2—C161.379 (6)C10—C111.413 (7)
N2—H2A0.8600C10—C121.461 (7)
N2—H2B0.8600C13—C141.366 (8)
C1—C21.462 (7)C13—C181.379 (7)
C2—C31.375 (8)C14—C151.371 (7)
C2—C111.408 (7)C14—H14A0.9300
C3—C41.391 (8)C15—C161.381 (8)
C3—H3A0.9300C15—H15A0.9300
C4—C51.340 (9)C16—C171.381 (8)
C4—H4A0.9300C17—C181.375 (7)
C5—C61.416 (9)C17—H17A0.9300
C5—H5A0.9300C18—H18A0.9300
C6—C71.391 (8)O1W—H1W10.8501
C6—C111.406 (6)O1W—H2W10.8501
C7—C81.353 (10)
C12—N1—C1124.8 (4)C10—C9—H9A119.9
C12—N1—C13118.3 (4)C8—C9—H9A119.9
C1—N1—C13116.9 (4)C9—C10—C11119.8 (5)
C16—N2—H2A120.0C9—C10—C12119.8 (5)
C16—N2—H2B120.0C11—C10—C12120.3 (4)
H2A—N2—H2B120.0C6—C11—C2120.3 (5)
O2—C1—N1119.8 (4)C6—C11—C10119.5 (5)
O2—C1—C2124.2 (5)C2—C11—C10120.2 (5)
N1—C1—C2115.9 (4)O1—C12—N1119.2 (4)
C3—C2—C11119.6 (5)O1—C12—C10123.5 (4)
C3—C2—C1119.2 (5)N1—C12—C10117.3 (4)
C11—C2—C1121.1 (5)C14—C13—C18119.5 (5)
C2—C3—C4119.9 (6)C14—C13—N1120.8 (5)
C2—C3—H3A120.1C18—C13—N1119.7 (5)
C4—C3—H3A120.1C13—C14—C15120.6 (6)
C5—C4—C3121.3 (6)C13—C14—H14A119.7
C5—C4—H4A119.4C15—C14—H14A119.7
C3—C4—H4A119.4C14—C15—C16120.5 (6)
C4—C5—C6121.2 (6)C14—C15—H15A119.7
C4—C5—H5A119.4C16—C15—H15A119.7
C6—C5—H5A119.4N2—C16—C17120.6 (6)
C7—C6—C11118.5 (6)N2—C16—C15120.6 (6)
C7—C6—C5123.9 (6)C17—C16—C15118.8 (5)
C11—C6—C5117.6 (5)C18—C17—C16120.4 (5)
C8—C7—C6121.9 (6)C18—C17—H17A119.8
C8—C7—H7A119.1C16—C17—H17A119.8
C6—C7—H7A119.1C17—C18—C13120.2 (5)
C7—C8—C9120.1 (6)C17—C18—H18A119.9
C7—C8—H8A120.0C13—C18—H18A119.9
C9—C8—H8A120.0H1W1—O1W—H2W1107.7
C10—C9—C8120.2 (7)
D—H···AD—HH···AD···AD—H···A
N2—H2A···O1Wi0.862.193.046 (6)172
N2—H2B···O1ii0.862.243.099 (5)178
O1W—H1W1···O1iii0.852.302.800 (5)118
O1W—H2W1···O1iv0.852.122.800 (5)136
C15—H15A···Cg1v0.932.96.140
Table 1

Hydrogen-bond geometry (Å, °)

Cg1 is the centroid of the benzene ring C13–C18.

D—H⋯AD—HH⋯ADAD—H⋯A
N2—H2A⋯O1Wi0.862.193.046 (6)172
N2—H2B⋯O1ii0.862.243.099 (5)178
O1W—H1W1⋯O1iii0.852.302.800 (5)118
O1W—H2W1⋯O1iv0.852.122.800 (5)136
C15—H15ACg1v0.932.963.717140

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) .

  2 in total

1.  Synthesis and screening of a molecularly imprinted polymer library targeted for penicillin G.

Authors:  Josefine Cederfur; Yuxin Pei; Meng Zihui; Maria Kempe
Journal:  J Comb Chem       Date:  2003 Jan-Feb

2.  Rapid screening of a receptor with molecular memory.

Authors:  Judith M Lavin; Ken D Shimizu
Journal:  Org Lett       Date:  2006-05-25       Impact factor: 6.005

  2 in total

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