Literature DB >> 21200825

2-(2,4-Dichloro-phen-yl)-3-[5-(3,5-dimethyl-phen-yl)-1,3,4-thia-diazol-2-yl]thia-zolidin-4-one.

Rong Wan1, Li-He Yin, Feng Han, Bin Wang, Jin-Tang Wang.   

Abstract

The title compound, C(19)H(15)Cl(2)N(3)OS(2), was synthesized by the reaction of N-(2,4-dichloro-phen-yl)-5-(3,5-dimethyl-phen-yl)-1,3,4-thia-diazol-2-amine and mercaptoacetic acid. The thia-zolidinone ring adopts a twist conformation. The 2,4-dichloro-phenyl ring is almost perpendicular to the thia-diazole ring, the dihedral angle being 82.8 (2)°. The 3,5-dimethyl-phenyl ring is nearly coplanar with the thia-diazole ring, the dihedral angle being 2.7 (2)°. An intramolecular C-H⋯N hydrogen bond is present.

Entities:  

Year:  2007        PMID: 21200825      PMCID: PMC2924216          DOI: 10.1107/S1600536807066068

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For general background, see: Arun et al. (1999 ▶); Chen et al. (2000 ▶); Kidwai et al. (2000 ▶); Vicentini et al. (1998 ▶); Wasfy et al. (1996 ▶). For bond-length data, see: Allen et al. (1987 ▶).

Experimental

Crystal data

C19H15Cl2N3OS2 M = 436.36 Triclinic, a = 8.1760 (16) Å b = 9.1650 (18) Å c = 14.483 (3) Å α = 80.60 (3)° β = 80.82 (3)° γ = 63.92 (3)° V = 956.9 (4) Å3 Z = 2 Mo Kα radiation μ = 0.57 mm−1 T = 298 (2) K 0.40 × 0.30 × 0.20 mm

Data collection

Enraf–Nonius CAD-4 diffractometer Absorption correction: ψ scan (North et al., 1968 ▶) T min = 0.803, T max = 0.894 4042 measured reflections 3761 independent reflections 2824 reflections with I > 2σ(I) R int = 0.044 3 standard reflections every 200 reflections intensity decay: none

Refinement

R[F 2 > 2σ(F 2)] = 0.055 wR(F 2) = 0.165 S = 1.03 3761 reflections 244 parameters H-atom parameters constrained Δρmax = 0.42 e Å−3 Δρmin = −0.45 e Å−3 Data collection: CAD-4 Software (Enraf–Nonius, 1989 ▶); cell refinement: CAD-4 Software; data reduction: XCAD4 (Harms & Wocadlo, 1995 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 1997 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997 ▶); molecular graphics: SHELXTL (Siemens, 1996 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536807066068/rn2029sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536807066068/rn2029Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C19H15Cl2N3OS2Z = 2
Mr = 436.36F(000) = 448
Triclinic, P1Dx = 1.514 Mg m3
Hall symbol: -P 1Melting point = 476–477 K
a = 8.1760 (16) ÅMo Kα radiation, λ = 0.71073 Å
b = 9.1650 (18) ÅCell parameters from 25 reflections
c = 14.483 (3) Åθ = 10–14°
α = 80.60 (3)°µ = 0.57 mm1
β = 80.82 (3)°T = 298 K
γ = 63.92 (3)°Block, light yellow
V = 956.9 (4) Å30.40 × 0.30 × 0.20 mm
Enraf–Nonius CAD-4 diffractometer2824 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.044
graphiteθmax = 26.0°, θmin = 1.4°
ω/2θ scansh = −9→10
Absorption correction: ψ scan (North et al., 1968)k = −11→11
Tmin = 0.803, Tmax = 0.894l = 0→17
4042 measured reflections3 standard reflections every 200 reflections
3761 independent reflections intensity decay: none
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.055Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.165H-atom parameters constrained
S = 1.03w = 1/[σ2(Fo2) + (0.05P)2 + 2.5P] where P = (Fo2 + 2Fc2)/3
3761 reflections(Δ/σ)max < 0.001
244 parametersΔρmax = 0.42 e Å3
0 restraintsΔρmin = −0.45 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cl10.6127 (2)0.7754 (2)−0.14356 (11)0.0843 (5)
Cl21.25961 (17)0.62298 (16)−0.02409 (9)0.0667 (4)
S11.13265 (18)0.90179 (17)0.12924 (9)0.0626 (4)
S20.80372 (16)0.67126 (13)0.42066 (7)0.0469 (3)
O0.7989 (6)0.9660 (4)0.3520 (3)0.0818 (12)
N10.9137 (5)0.4033 (4)0.3485 (2)0.0522 (9)
N20.9641 (5)0.5066 (4)0.2796 (2)0.0523 (9)
N30.9527 (5)0.7697 (4)0.2528 (2)0.0487 (8)
C10.7096 (8)−0.0041 (6)0.5859 (4)0.0672 (13)
H1B0.6622−0.03770.64650.101*
H1C0.8348−0.07960.57270.101*
H1D0.6386−0.00230.53860.101*
C20.6989 (6)0.1640 (6)0.5861 (3)0.0514 (11)
C30.7698 (6)0.2378 (5)0.5073 (3)0.0469 (10)
H3A0.82610.18150.45470.056*
C40.7565 (6)0.3936 (5)0.5074 (3)0.0439 (9)
C50.6693 (6)0.4783 (6)0.5844 (3)0.0496 (10)
H5A0.66020.58310.58420.059*
C60.5944 (6)0.4091 (6)0.6629 (3)0.0486 (10)
C70.6134 (6)0.2527 (6)0.6616 (3)0.0527 (11)
H7A0.56640.20480.71400.063*
C80.4899 (7)0.5073 (7)0.7442 (3)0.0698 (14)
H8A0.44850.44180.79200.105*
H8B0.38630.60250.72260.105*
H8C0.56830.54020.76980.105*
C90.8307 (5)0.4717 (5)0.4236 (3)0.0409 (9)
C100.9149 (6)0.6481 (5)0.3094 (3)0.0443 (9)
C111.0540 (6)0.7385 (5)0.1604 (3)0.0480 (10)
H11A1.16020.63230.16510.058*
C120.9563 (9)1.0308 (7)0.2078 (4)0.0745 (16)
H12A1.00261.09010.23800.089*
H12B0.85461.10930.17380.089*
C130.8942 (7)0.9217 (6)0.2809 (3)0.0576 (12)
C140.9401 (6)0.7419 (5)0.0871 (3)0.0431 (9)
C150.7515 (6)0.7987 (5)0.1026 (3)0.0500 (10)
H15A0.69230.83140.16100.060*
C160.6505 (6)0.8074 (6)0.0324 (3)0.0532 (11)
H16A0.52390.84620.04310.064*
C170.7404 (7)0.7576 (5)−0.0542 (3)0.0538 (11)
C180.9264 (6)0.6968 (5)−0.0713 (3)0.0505 (10)
H18A0.98550.6604−0.12900.061*
C191.0239 (6)0.6911 (5)−0.0003 (3)0.0461 (10)
U11U22U33U12U13U23
Cl10.1062 (12)0.1000 (11)0.0749 (9)−0.0627 (10)−0.0278 (8)−0.0105 (8)
Cl20.0586 (7)0.0700 (8)0.0645 (8)−0.0285 (6)0.0135 (6)−0.0046 (6)
S10.0718 (8)0.0738 (8)0.0616 (7)−0.0531 (7)−0.0053 (6)0.0051 (6)
S20.0603 (7)0.0507 (6)0.0407 (5)−0.0345 (5)−0.0035 (5)−0.0034 (4)
O0.130 (3)0.067 (2)0.062 (2)−0.061 (2)0.020 (2)−0.0169 (18)
N10.071 (2)0.051 (2)0.0410 (19)−0.0354 (19)0.0016 (17)0.0019 (16)
N20.064 (2)0.050 (2)0.046 (2)−0.0316 (18)0.0043 (17)−0.0019 (16)
N30.060 (2)0.049 (2)0.0456 (19)−0.0339 (18)−0.0029 (16)−0.0006 (16)
C10.079 (3)0.058 (3)0.066 (3)−0.037 (3)0.006 (3)0.000 (2)
C20.063 (3)0.065 (3)0.041 (2)−0.042 (2)−0.007 (2)0.003 (2)
C30.056 (2)0.055 (2)0.037 (2)−0.032 (2)0.0002 (18)−0.0044 (18)
C40.048 (2)0.053 (2)0.041 (2)−0.0301 (19)−0.0090 (17)0.0004 (18)
C50.057 (3)0.059 (3)0.047 (2)−0.035 (2)−0.0089 (19)−0.006 (2)
C60.046 (2)0.070 (3)0.039 (2)−0.032 (2)−0.0046 (17)−0.009 (2)
C70.061 (3)0.078 (3)0.038 (2)−0.049 (2)−0.0068 (19)0.005 (2)
C80.075 (3)0.095 (4)0.056 (3)−0.049 (3)0.009 (2)−0.028 (3)
C90.039 (2)0.048 (2)0.040 (2)−0.0232 (18)−0.0042 (16)−0.0029 (17)
C100.058 (2)0.052 (2)0.034 (2)−0.035 (2)−0.0088 (17)0.0044 (17)
C110.053 (2)0.053 (2)0.043 (2)−0.031 (2)0.0003 (18)0.0011 (18)
C120.114 (5)0.069 (3)0.062 (3)−0.064 (3)−0.001 (3)0.002 (3)
C130.080 (3)0.052 (3)0.053 (3)−0.043 (2)−0.001 (2)0.000 (2)
C140.051 (2)0.040 (2)0.042 (2)−0.0264 (18)−0.0002 (18)0.0020 (17)
C150.056 (3)0.059 (3)0.043 (2)−0.035 (2)−0.0004 (19)−0.0006 (19)
C160.046 (2)0.058 (3)0.059 (3)−0.027 (2)−0.002 (2)−0.004 (2)
C170.075 (3)0.052 (3)0.053 (3)−0.043 (2)−0.007 (2)−0.004 (2)
C180.071 (3)0.040 (2)0.048 (2)−0.033 (2)0.005 (2)−0.0052 (18)
C190.055 (2)0.040 (2)0.047 (2)−0.0287 (19)0.0016 (19)0.0013 (17)
Cl1—C171.734 (5)C5—C61.398 (6)
Cl2—C191.739 (4)C5—H5A0.9300
S1—C121.786 (6)C6—C71.375 (6)
S1—C111.841 (4)C6—C81.509 (6)
S2—C101.716 (4)C7—H7A0.9300
S2—C91.738 (4)C8—H8A0.9600
O—C131.198 (6)C8—H8B0.9600
N1—C91.285 (5)C8—H8C0.9600
N1—N21.401 (5)C11—C141.507 (6)
N2—C101.303 (5)C11—H11A0.9800
N3—C131.368 (6)C12—C131.518 (6)
N3—C101.391 (5)C12—H12A0.9700
N3—C111.458 (5)C12—H12B0.9700
C1—C21.504 (6)C14—C151.386 (6)
C1—H1B0.9600C14—C191.388 (6)
C1—H1C0.9600C15—C161.380 (6)
C1—H1D0.9600C15—H15A0.9300
C2—C71.376 (6)C16—C171.385 (6)
C2—C31.406 (6)C16—H16A0.9300
C3—C41.383 (6)C17—C181.365 (6)
C3—H3A0.9300C18—C191.378 (6)
C4—C51.378 (6)C18—H18A0.9300
C4—C91.488 (5)
C12—S1—C1192.2 (2)N1—C9—S2114.6 (3)
C10—S2—C986.20 (19)C4—C9—S2120.6 (3)
C9—N1—N2112.7 (3)N2—C10—N3120.8 (4)
C10—N2—N1110.8 (3)N2—C10—S2115.7 (3)
C13—N3—C10121.6 (4)N3—C10—S2123.5 (3)
C13—N3—C11118.1 (3)N3—C11—C14113.4 (3)
C10—N3—C11120.2 (3)N3—C11—S1104.4 (3)
C2—C1—H1B109.5C14—C11—S1110.7 (3)
C2—C1—H1C109.5N3—C11—H11A109.4
H1B—C1—H1C109.5C14—C11—H11A109.4
C2—C1—H1D109.5S1—C11—H11A109.4
H1B—C1—H1D109.5C13—C12—S1107.3 (4)
H1C—C1—H1D109.5C13—C12—H12A110.3
C7—C2—C3117.9 (4)S1—C12—H12A110.3
C7—C2—C1121.2 (4)C13—C12—H12B110.3
C3—C2—C1120.9 (4)S1—C12—H12B110.3
C4—C3—C2120.5 (4)H12A—C12—H12B108.5
C4—C3—H3A119.8O—C13—N3124.4 (4)
C2—C3—H3A119.8O—C13—C12124.1 (4)
C5—C4—C3119.7 (4)N3—C13—C12111.5 (4)
C5—C4—C9120.0 (4)C15—C14—C19117.8 (4)
C3—C4—C9120.3 (4)C15—C14—C11122.4 (4)
C4—C5—C6121.0 (4)C19—C14—C11119.7 (4)
C4—C5—H5A119.5C16—C15—C14120.9 (4)
C6—C5—H5A119.5C16—C15—H15A119.6
C7—C6—C5117.9 (4)C14—C15—H15A119.6
C7—C6—C8121.8 (4)C15—C16—C17119.0 (4)
C5—C6—C8120.2 (4)C15—C16—H16A120.5
C6—C7—C2123.0 (4)C17—C16—H16A120.5
C6—C7—H7A118.5C18—C17—C16121.8 (4)
C2—C7—H7A118.5C18—C17—Cl1119.2 (4)
C6—C8—H8A109.5C16—C17—Cl1119.0 (4)
C6—C8—H8B109.5C17—C18—C19118.0 (4)
H8A—C8—H8B109.5C17—C18—H18A121.0
C6—C8—H8C109.5C19—C18—H18A121.0
H8A—C8—H8C109.5C18—C19—C14122.4 (4)
H8B—C8—H8C109.5C18—C19—Cl2117.9 (3)
N1—C9—C4124.8 (4)C14—C19—Cl2119.6 (3)
C9—N1—N2—C100.5 (5)C10—N3—C11—C1476.7 (5)
C7—C2—C3—C41.3 (6)C13—N3—C11—S118.4 (5)
C1—C2—C3—C4178.9 (4)C10—N3—C11—S1−162.7 (3)
C2—C3—C4—C5−1.5 (6)C12—S1—C11—N3−22.7 (3)
C2—C3—C4—C9−179.6 (4)C12—S1—C11—C1499.6 (3)
C3—C4—C5—C60.2 (6)C11—S1—C12—C1322.1 (4)
C9—C4—C5—C6178.4 (4)C10—N3—C13—O−4.5 (8)
C4—C5—C6—C71.2 (6)C11—N3—C13—O174.4 (5)
C4—C5—C6—C8−176.4 (4)C10—N3—C13—C12178.8 (4)
C5—C6—C7—C2−1.4 (7)C11—N3—C13—C12−2.4 (6)
C8—C6—C7—C2176.2 (4)S1—C12—C13—O167.6 (5)
C3—C2—C7—C60.2 (7)S1—C12—C13—N3−15.6 (6)
C1—C2—C7—C6−177.4 (4)N3—C11—C14—C1511.2 (6)
N2—N1—C9—C4178.1 (4)S1—C11—C14—C15−105.7 (4)
N2—N1—C9—S2−0.3 (5)N3—C11—C14—C19−170.7 (3)
C5—C4—C9—N1−179.9 (4)S1—C11—C14—C1972.4 (4)
C3—C4—C9—N1−1.8 (6)C19—C14—C15—C16−1.3 (6)
C5—C4—C9—S2−1.6 (5)C11—C14—C15—C16176.9 (4)
C3—C4—C9—S2176.5 (3)C14—C15—C16—C170.3 (7)
C10—S2—C9—N10.0 (3)C15—C16—C17—C181.4 (7)
C10—S2—C9—C4−178.5 (3)C15—C16—C17—Cl1−177.7 (3)
N1—N2—C10—N3179.3 (4)C16—C17—C18—C19−2.1 (6)
N1—N2—C10—S2−0.5 (5)Cl1—C17—C18—C19177.1 (3)
C13—N3—C10—N2176.7 (4)C17—C18—C19—C141.1 (6)
C11—N3—C10—N2−2.2 (6)C17—C18—C19—Cl2−176.9 (3)
C13—N3—C10—S2−3.5 (6)C15—C14—C19—C180.6 (6)
C11—N3—C10—S2177.7 (3)C11—C14—C19—C18−177.6 (4)
C9—S2—C10—N20.3 (3)C15—C14—C19—Cl2178.6 (3)
C9—S2—C10—N3−179.6 (4)C11—C14—C19—Cl20.4 (5)
C13—N3—C11—C14−102.2 (4)
D—H···AD—HH···AD···AD—H···A
C15—H15A···N30.932.492.842 (6)102
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C15—H15A⋯N30.932.492.842 (6)102
  1 in total

1.  Synthesis and fungicidal activity against Rhizoctonia solani of 2-alkyl (Alkylthio)-5-pyrazolyl-1,3,4-oxadiazoles (Thiadiazoles).

Authors:  H Chen; Z Li; Y Han
Journal:  J Agric Food Chem       Date:  2000-11       Impact factor: 5.279

  1 in total
  1 in total

1.  2-(4-Fluoro-phen-yl)-3-[5-(4-nitro-phen-yl)-1,3,4-thia-diazol-2-yl]-1,3-thia-zolidin-4-one.

Authors:  Peng Yu; Kang An; Qiu He; Jian-Qaing Zhang; Rong Wan
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-06-23
  1 in total

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