Literature DB >> 21200777

2-(2,3,5,6-Tetra-fluoro-4-iodo-anilino)-ethanol.

Pierangelo Metrangolo, Franck Meyer, Tullio Pilati, Giuseppe Resnati.   

Abstract

The reaction of 2-amino-ethanol and iodo-penta-fluoro-benzene in the presence of K(2)CO(3) gave the title compound, C(8)H(6)F(4)INO, in high yield. The structure is characterized by double layers of mol-ecules linked by O-H⋯O and N-H⋯O hydrogen bonds, and linear C-I⋯F [I⋯F = 3.049 (2) Å] and bent C-I⋯I [I⋯I = 3.9388 (7) Å] inter-actions between pairs of nearly parallel iodo-tetra-fluoro-phenyl groups. No O⋯I or N⋯I halogen bonding is found.

Entities:  

Year:  2007        PMID: 21200777      PMCID: PMC2915272          DOI: 10.1107/S1600536807064197

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related literature, see: Metrangolo & Resnati (2001 ▶); Metrangolo et al. (2005 ▶, 2007 ▶).

Experimental

Crystal data

C8H6F4INO M = 335.04 Monoclinic, a = 13.327 (2) Å b = 17.663 (3) Å c = 8.3044 (14) Å β = 96.94 (2)° V = 1940.5 (6) Å3 Z = 8 Mo Kα radiation μ = 3.33 mm−1 T = 158 (2) K 0.24 × 0.16 × 0.08 mm

Data collection

Bruker SMART CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 1999 ▶) T min = 0.691, T max = 1.000 (expected range = 0.529–0.766) 8054 measured reflections 2924 independent reflections 2422 reflections with I > 2σ(I) R int = 0.026

Refinement

R[F 2 > 2σ(F 2)] = 0.036 wR(F 2) = 0.092 S = 1.04 2924 reflections 162 parameters 8 restraints All H-atom parameters refined Δρmax = 1.65 e Å−3 Δρmin = −0.47 e Å−3 Data collection: SMART (Bruker, 1999 ▶); cell refinement: SAINT (Bruker, 1999 ▶); data reduction: SAINT; program(s) used to solve structure: SIR2002 (Burla et al., 2003 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶) and Mercury (Macrae et al., 2006 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536807064197/cf2167sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536807064197/cf2167Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C8H6F4INOF000 = 1264
Mr = 335.04Dx = 2.294 Mg m3
Monoclinic, C2/cMelting point = 343–348 K
Hall symbol: -C 2ycMo Kα radiation λ = 0.71073 Å
a = 13.327 (2) ÅCell parameters from 2964 reflections
b = 17.663 (3) Åθ = 3.0–29.1º
c = 8.3044 (14) ŵ = 3.33 mm1
β = 96.94 (2)ºT = 158 (2) K
V = 1940.5 (6) Å3Irregular table, colourless
Z = 80.24 × 0.16 × 0.08 mm
Bruker SMART CCD area-detector diffractometer2924 independent reflections
Radiation source: fine-focus sealed tube2422 reflections with I > 2σ(I)
Monochromator: graphiteRint = 0.026
T = 158(2) Kθmax = 31.3º
ω and φ scansθmin = 1.9º
Absorption correction: multi-scan(SADABS; Bruker, 1999)h = −18→18
Tmin = 0.691, Tmax = 1.000k = −16→25
8054 measured reflectionsl = −11→12
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.036All H-atom parameters refined
wR(F2) = 0.092  w = 1/[σ2(Fo2) + (0.0481P)2 + 2.2775P] where P = (Fo2 + 2Fc2)/3
S = 1.04(Δ/σ)max = 0.001
2924 reflectionsΔρmax = 1.65 e Å3
162 parametersΔρmin = −0.47 e Å3
8 restraintsExtinction correction: none
Primary atom site location: structure-invariant direct methods
Experimental. Data collection using an OXFORD low temperature device. Below 158 K the structure possibly shows a phase transition.
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/UeqOcc. (<1)
I10.116120 (18)0.431723 (13)1.05305 (3)0.03962 (10)
F10.11489 (13)0.12833 (11)1.03239 (18)0.0310 (4)
F20.10979 (15)0.26089 (11)1.1821 (2)0.0341 (4)
F30.13483 (15)0.38552 (11)0.6853 (2)0.0375 (4)
F40.13603 (14)0.25397 (11)0.53509 (19)0.0320 (4)
N10.12288 (19)0.11508 (15)0.7067 (3)0.0256 (5)
H1N0.120 (3)0.080 (2)0.779 (5)0.032 (10)*
O10.06410 (19)0.02423 (13)0.3901 (2)0.0322 (5)
H1O0.026 (5)0.027 (5)0.306 (6)0.048*0.50
H2O0.022 (5)0.020 (5)0.454 (8)0.048*0.50
C10.12620 (19)0.18530 (16)0.7785 (3)0.0211 (5)
C20.1188 (2)0.19221 (15)0.9451 (3)0.0220 (5)
C30.11614 (19)0.26044 (18)1.0212 (3)0.0239 (5)
C40.1225 (2)0.32801 (16)0.9396 (4)0.0257 (5)
C50.1307 (2)0.32223 (17)0.7744 (4)0.0266 (6)
C60.13237 (19)0.25369 (15)0.6968 (3)0.0235 (5)
C70.1830 (2)0.0964 (2)0.5749 (3)0.0300 (6)
H7A0.216 (3)0.0485 (14)0.602 (4)0.031 (9)*
H7B0.237 (2)0.1319 (17)0.573 (4)0.032 (9)*
C80.1226 (3)0.0915 (2)0.4085 (3)0.0303 (6)
H8A0.079 (3)0.136 (2)0.388 (6)0.072 (15)*
H8B0.161 (2)0.090 (2)0.319 (3)0.029 (9)*
U11U22U33U12U13U23
I10.04639 (16)0.02605 (13)0.04478 (15)0.00436 (8)−0.00122 (10)−0.00885 (8)
F10.0507 (11)0.0251 (9)0.0177 (7)−0.0040 (7)0.0061 (7)0.0048 (6)
F20.0505 (10)0.0345 (10)0.0177 (7)0.0006 (8)0.0052 (7)−0.0053 (7)
F30.0486 (11)0.0235 (9)0.0403 (10)−0.0035 (8)0.0052 (8)0.0108 (8)
F40.0446 (10)0.0336 (10)0.0190 (8)−0.0037 (8)0.0089 (7)0.0048 (7)
N10.0371 (13)0.0243 (12)0.0161 (10)−0.0009 (10)0.0068 (9)0.0017 (9)
O10.0516 (14)0.0244 (10)0.0190 (9)0.0051 (10)−0.0024 (9)−0.0019 (8)
C10.0215 (11)0.0249 (13)0.0171 (11)0.0001 (10)0.0032 (9)0.0004 (9)
C20.0263 (12)0.0208 (12)0.0192 (11)−0.0011 (10)0.0040 (9)0.0039 (9)
C30.0248 (13)0.0273 (14)0.0195 (12)−0.0018 (10)0.0021 (10)−0.0017 (10)
C40.0229 (12)0.0215 (13)0.0325 (14)0.0001 (10)0.0021 (10)−0.0011 (11)
C50.0243 (12)0.0253 (13)0.0297 (14)−0.0023 (11)0.0020 (10)0.0084 (11)
C60.0240 (12)0.0275 (14)0.0194 (12)−0.0035 (11)0.0045 (10)0.0030 (10)
C70.0345 (15)0.0359 (16)0.0204 (12)0.0057 (13)0.0061 (11)−0.0026 (11)
C80.0408 (16)0.0331 (15)0.0172 (12)0.0021 (13)0.0049 (11)0.0016 (11)
I1—C42.067 (3)C1—C61.393 (4)
F1—C21.345 (3)C1—C21.404 (4)
F2—C31.349 (3)C2—C31.363 (4)
F3—C51.346 (3)C3—C41.380 (4)
F4—C61.350 (3)C4—C51.392 (4)
N1—C11.375 (4)C5—C61.373 (4)
N1—C71.470 (4)C7—C81.516 (4)
N1—H1N0.87 (4)C7—H7A0.97 (2)
O1—C81.419 (4)C7—H7B0.96 (2)
O1—H1O0.818 (10)C8—H8A0.97 (2)
O1—H2O0.818 (10)C8—H8B0.96 (2)
C1—N1—C7122.3 (2)F3—C5—C6118.0 (3)
C1—N1—H1N110 (3)F3—C5—C4119.6 (3)
C7—N1—H1N115 (3)C6—C5—C4122.3 (3)
C8—O1—H1O108 (6)F4—C6—C5117.9 (2)
C8—O1—H2O115 (6)F4—C6—C1120.0 (2)
H1O—O1—H2O99 (8)C5—C6—C1122.0 (2)
N1—C1—C6124.9 (2)N1—C7—C8114.5 (3)
N1—C1—C2120.3 (2)N1—C7—H7A107 (2)
C6—C1—C2114.8 (2)C8—C7—H7A110 (2)
F1—C2—C3119.1 (2)N1—C7—H7B110 (2)
F1—C2—C1118.0 (2)C8—C7—H7B110 (2)
C3—C2—C1122.9 (3)H7A—C7—H7B105 (3)
F2—C3—C2118.2 (3)O1—C8—C7111.7 (3)
F2—C3—C4119.8 (3)O1—C8—H8A110 (3)
C2—C3—C4122.0 (3)C7—C8—H8A110 (3)
C3—C4—C5115.9 (3)O1—C8—H8B104 (2)
C3—C4—I1122.3 (2)C7—C8—H8B116 (2)
C5—C4—I1121.8 (2)H8A—C8—H8B105 (4)
C7—N1—C1—C638.5 (4)C3—C4—C5—F3178.5 (2)
C7—N1—C1—C2−144.3 (3)I1—C4—C5—F30.1 (4)
N1—C1—C2—F14.1 (4)C3—C4—C5—C60.0 (4)
C6—C1—C2—F1−178.5 (2)I1—C4—C5—C6−178.3 (2)
N1—C1—C2—C3−176.3 (3)F3—C5—C6—F4−1.3 (4)
C6—C1—C2—C31.1 (4)C4—C5—C6—F4177.1 (2)
F1—C2—C3—F20.1 (4)F3—C5—C6—C1−178.6 (2)
C1—C2—C3—F2−179.5 (2)C4—C5—C6—C1−0.1 (4)
F1—C2—C3—C4178.3 (2)N1—C1—C6—F4−0.3 (4)
C1—C2—C3—C4−1.3 (4)C2—C1—C6—F4−177.6 (2)
F2—C3—C4—C5178.8 (2)N1—C1—C6—C5176.9 (3)
C2—C3—C4—C50.7 (4)C2—C1—C6—C5−0.4 (4)
F2—C3—C4—I1−2.8 (4)C1—N1—C7—C8−106.0 (3)
C2—C3—C4—I1179.0 (2)N1—C7—C8—O1−74.4 (4)
D—H···AD—HH···AD···AD—H···A
N1—H1N···O1i0.87 (2)2.23 (3)3.046 (3)157 (3)
O1—H1O···O1ii0.82 (5)1.90 (7)2.715 (4)175 (8)
O1—H2O···O1iii0.82 (5)1.99 (5)2.781 (4)162 (8)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1N⋯O1i0.87 (2)2.23 (3)3.046 (3)157 (3)
O1—H1O⋯O1ii0.82 (5)1.90 (7)2.715 (4)175 (8)
O1—H2O⋯O1iii0.82 (5)1.99 (5)2.781 (4)162 (8)

Symmetry codes: (i) ; (ii) ; (iii) .

  3 in total

1.  SHELXL: high-resolution refinement.

Authors:  G M Sheldrick; T R Schneider
Journal:  Methods Enzymol       Date:  1997       Impact factor: 1.600

2.  Halogen bonding: a paradigm in supramolecular chemistry.

Authors:  P Metrangolo; G Resnati
Journal:  Chemistry       Date:  2001-06-18       Impact factor: 5.236

3.  Halogen bonding based recognition processes: a world parallel to hydrogen bonding.

Authors:  Pierangelo Metrangolo; Hannes Neukirch; Tullio Pilati; Giuseppe Resnati
Journal:  Acc Chem Res       Date:  2005-05       Impact factor: 22.384

  3 in total

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