| Literature DB >> 21200755 |
P Bhyrappa, V Velkannan, B Varghese.
Abstract
The crystal structure of the title compound, C(44)H(22)F(8)N(4), shows an unusual non-planar geometry of the porphyrin ring although the mol-ecule is free of steric crowding around the periphery of the macrocycle. The mol-ecular packing exhibits weak inter-molecular hydrogen bonding (C-H⋯F) and C-H⋯π inter-actions. The molecular symmetry is .Entities:
Year: 2007 PMID: 21200755 PMCID: PMC2915253 DOI: 10.1107/S1600536807062782
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C44H22F8N4 | |
| Mo | |
| Tetragonal, | Cell parameters from 5676 reflections |
| Hall symbol: I -4 2bw | θ = 2.7–27.4° |
| µ = 0.12 mm−1 | |
| Plate, purple | |
| 0.30 × 0.20 × 0.20 mm | |
| Bruker APEXII CCD area-detector diffractometer | 1145 independent reflections |
| Radiation source: fine-focus sealed tube | 1049 reflections with |
| graphite | |
| ω and φ scan | θmax = 28.4°, θmin = 2.0° |
| Absorption correction: multi-scan ( | |
| 20353 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 1145 reflections | (Δ/σ)max < 0.001 |
| 127 parameters | Δρmax = 0.20 e Å−3 |
| 0 restraints | Δρmin = −0.15 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Occ. (<1) | |||||
| C1 | 0.62343 (12) | −0.15392 (12) | 0.26244 (14) | 0.0234 (4) | |
| C2 | 0.71372 (13) | −0.17616 (13) | 0.25131 (18) | 0.0289 (4) | |
| H2 | 0.7375 | −0.2314 | 0.2561 | 0.035* | |
| C3 | 0.75734 (13) | −0.10209 (12) | 0.23267 (16) | 0.0285 (4) | |
| H3 | 0.8164 | −0.0970 | 0.2205 | 0.034* | |
| C4 | 0.69521 (12) | −0.03261 (13) | 0.23514 (15) | 0.0233 (4) | |
| C5 | 0.71381 (12) | 0.05575 (12) | 0.22542 (14) | 0.0225 (4) | |
| C6 | 0.80391 (13) | 0.08176 (12) | 0.19734 (15) | 0.0240 (4) | |
| C7 | 0.87363 (13) | 0.07798 (15) | 0.25940 (16) | 0.0310 (5) | |
| H7 | 0.8665 | 0.0583 | 0.3217 | 0.037* | |
| C8 | 0.95385 (14) | 0.10405 (16) | 0.22687 (18) | 0.0353 (5) | |
| C9 | 0.96818 (14) | 0.13294 (16) | 0.1348 (2) | 0.0385 (6) | |
| H9 | 1.0230 | 0.1496 | 0.1141 | 0.046* | |
| C10 | 0.89782 (17) | 0.13583 (16) | 0.07556 (17) | 0.0380 (5) | |
| C11 | 0.81595 (13) | 0.11143 (15) | 0.10383 (16) | 0.0299 (5) | |
| H11 | 0.7695 | 0.1146 | 0.0616 | 0.036* | |
| N1 | 0.61430 (10) | −0.06642 (10) | 0.25215 (12) | 0.0230 (4) | |
| H1 | 0.5666 | −0.0377 | 0.2557 | 0.028* | 0.50 |
| F1 | 1.02219 (8) | 0.10061 (13) | 0.28671 (12) | 0.0550 (5) | |
| F2 | 0.90872 (12) | 0.16429 (14) | −0.01500 (13) | 0.0632 (5) |
| C1 | 0.0216 (9) | 0.0199 (8) | 0.0288 (10) | 0.0015 (7) | −0.0003 (8) | 0.0020 (7) |
| C2 | 0.0221 (9) | 0.0225 (9) | 0.0420 (11) | 0.0048 (7) | 0.0006 (9) | 0.0041 (9) |
| C3 | 0.0190 (9) | 0.0260 (9) | 0.0404 (11) | 0.0033 (7) | 0.0033 (8) | 0.0040 (9) |
| C4 | 0.0180 (8) | 0.0239 (9) | 0.0280 (9) | 0.0000 (7) | 0.0029 (8) | 0.0009 (7) |
| C5 | 0.0193 (8) | 0.0209 (9) | 0.0273 (9) | 0.0001 (7) | 0.0017 (7) | 0.0001 (7) |
| C6 | 0.0211 (9) | 0.0183 (8) | 0.0325 (9) | 0.0001 (7) | 0.0040 (8) | −0.0020 (8) |
| C7 | 0.0237 (10) | 0.0389 (11) | 0.0302 (10) | −0.0006 (8) | 0.0031 (8) | −0.0023 (9) |
| C8 | 0.0207 (9) | 0.0393 (12) | 0.0458 (12) | −0.0035 (9) | −0.0008 (9) | −0.0085 (11) |
| C9 | 0.0239 (10) | 0.0382 (12) | 0.0533 (14) | −0.0089 (9) | 0.0134 (10) | −0.0070 (11) |
| C10 | 0.0377 (12) | 0.0366 (12) | 0.0396 (12) | −0.0041 (10) | 0.0124 (10) | 0.0048 (10) |
| C11 | 0.0252 (9) | 0.0305 (10) | 0.0340 (10) | −0.0003 (9) | 0.0014 (8) | 0.0046 (9) |
| N1 | 0.0169 (7) | 0.0201 (8) | 0.0319 (9) | −0.0001 (6) | 0.0009 (7) | 0.0015 (6) |
| F1 | 0.0214 (7) | 0.0862 (13) | 0.0575 (9) | −0.0066 (7) | −0.0062 (6) | −0.0118 (10) |
| F2 | 0.0548 (10) | 0.0853 (13) | 0.0495 (9) | −0.0146 (9) | 0.0159 (8) | 0.0246 (9) |
| C1—N1 | 1.365 (2) | C6—C11 | 1.398 (3) |
| C1—C5i | 1.404 (3) | C7—C8 | 1.378 (3) |
| C1—C2 | 1.443 (3) | C7—H7 | 0.9300 |
| C2—C3 | 1.351 (3) | C8—F1 | 1.347 (3) |
| C2—H2 | 0.9300 | C8—C9 | 1.381 (4) |
| C3—C4 | 1.438 (3) | C9—C10 | 1.366 (4) |
| C3—H3 | 0.9300 | C9—H9 | 0.9300 |
| C4—N1 | 1.373 (3) | C10—F2 | 1.351 (3) |
| C4—C5 | 1.400 (3) | C10—C11 | 1.376 (3) |
| C5—C1ii | 1.404 (3) | C11—H11 | 0.9300 |
| C5—C6 | 1.499 (3) | N1—H1 | 0.8600 |
| C6—C7 | 1.383 (3) | ||
| N1—C1—C5i | 125.93 (17) | C8—C7—C6 | 118.6 (2) |
| N1—C1—C2 | 108.87 (16) | C8—C7—H7 | 120.7 |
| C5i—C1—C2 | 125.04 (17) | C6—C7—H7 | 120.7 |
| C3—C2—C1 | 107.48 (17) | F1—C8—C7 | 119.1 (2) |
| C3—C2—H2 | 126.3 | F1—C8—C9 | 117.9 (2) |
| C1—C2—H2 | 126.3 | C7—C8—C9 | 123.1 (2) |
| C2—C3—C4 | 107.07 (17) | C10—C9—C8 | 116.69 (19) |
| C2—C3—H3 | 126.5 | C10—C9—H9 | 121.7 |
| C4—C3—H3 | 126.5 | C8—C9—H9 | 121.7 |
| N1—C4—C5 | 124.97 (17) | F2—C10—C9 | 118.7 (2) |
| N1—C4—C3 | 109.07 (16) | F2—C10—C11 | 118.2 (2) |
| C5—C4—C3 | 125.93 (18) | C9—C10—C11 | 123.1 (2) |
| C4—C5—C1ii | 125.26 (18) | C10—C11—C6 | 118.7 (2) |
| C4—C5—C6 | 118.44 (16) | C10—C11—H11 | 120.6 |
| C1ii—C5—C6 | 116.28 (17) | C6—C11—H11 | 120.6 |
| C7—C6—C11 | 119.85 (18) | C1—N1—C4 | 107.47 (16) |
| C7—C6—C5 | 123.03 (19) | C1—N1—H1 | 126.3 |
| C11—C6—C5 | 117.12 (18) | C4—N1—H1 | 126.3 |
| N1—C1—C2—C3 | −1.2 (3) | C6—C7—C8—F1 | −179.98 (19) |
| C5i—C1—C2—C3 | 174.4 (2) | C6—C7—C8—C9 | −0.7 (4) |
| C1—C2—C3—C4 | 1.9 (3) | F1—C8—C9—C10 | −180.0 (2) |
| C2—C3—C4—N1 | −2.0 (3) | C7—C8—C9—C10 | 0.7 (4) |
| C2—C3—C4—C5 | 175.8 (2) | C8—C9—C10—F2 | 179.5 (2) |
| N1—C4—C5—C1ii | 4.3 (3) | C8—C9—C10—C11 | −0.2 (4) |
| C3—C4—C5—C1ii | −173.2 (2) | F2—C10—C11—C6 | 179.9 (2) |
| N1—C4—C5—C6 | −174.02 (18) | C9—C10—C11—C6 | −0.4 (4) |
| C3—C4—C5—C6 | 8.5 (3) | C7—C6—C11—C10 | 0.4 (3) |
| C4—C5—C6—C7 | −74.1 (3) | C5—C6—C11—C10 | −180.0 (2) |
| C1ii—C5—C6—C7 | 107.5 (2) | C5i—C1—N1—C4 | −175.62 (19) |
| C4—C5—C6—C11 | 106.3 (2) | C2—C1—N1—C4 | −0.1 (2) |
| C1ii—C5—C6—C11 | −72.1 (2) | C5—C4—N1—C1 | −176.6 (2) |
| C11—C6—C7—C8 | 0.1 (3) | C3—C4—N1—C1 | 1.3 (2) |
| C5—C6—C7—C8 | −179.5 (2) |
| H··· | ||||
| C7—H7···C1iii | 0.93 | 2.87 | 3.634 (2) | 140 |
| C3—H3···F1iv | 0.93 | 2.66 | 3.484 (2) | 148 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| C7—H7⋯C1i | 0.93 | 2.87 | 3.634 (2) | 140 |
| C3—H3⋯F1ii | 0.93 | 2.66 | 3.484 (2) | 148 |
Symmetry codes: (i) ; (ii) .