Literature DB >> 21200730

20-O-β-d-Xylopyranos-yl(1→6)-β-d-glucopyranosyl-20(S)-protopanaxadiol methanol solvate.

Xing-Wei Li1, Wei Zhou, Qin Yan, Pei Zhou.   

Abstract

The title compound, C(41)H(70)O(12)·CH(4)O, was prepared by microbial transformation. Within the steroid skeleton of the mol-ecule, three six-membered rings exhibit a chair conformation, while the five -membered ring adopts an envelope conformation. The two pyranosyl rings also adopt chair conformations. The mol-ecules are held together by an extensive O-H⋯O hydrogen-bonding network.

Entities:  

Year:  2007        PMID: 21200730      PMCID: PMC2915232          DOI: 10.1107/S1600536807063118

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For general background, see: He et al. (2005 ▶); Hu et al. (2007 ▶). For related literature, see: Li et al. (2006 ▶).

Experimental

Crystal data

C41H70O12·CH4O M = 787.01 Orthorhombic, a = 8.3044 (7) Å b = 13.2927 (11) Å c = 38.964 (3) Å V = 4301.1 (6) Å3 Z = 4 Mo Kα radiation μ = 0.09 mm−1 T = 293 (2) K 0.43 × 0.31 × 0.21 mm

Data collection

Bruker SMART APEX CCD area-detector diffractometer Absorption correction: none 25549 measured reflections 5269 independent reflections 3467 reflections with I > 2σ(I) R int = 0.084

Refinement

R[F 2 > 2σ(F 2)] = 0.045 wR(F 2) = 0.099 S = 0.89 5269 reflections 505 parameters H-atom parameters constrained Δρmax = 0.21 e Å−3 Δρmin = −0.16 e Å−3 Data collection: SMART (Bruker, 1999 ▶); cell refinement: SAINT (Bruker, 1999 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 1997 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997 ▶); molecular graphics: SHELXTL (Bruker, 1997 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536807063118/xu2351sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536807063118/xu2351Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C41H70O12·C1H4O1F000 = 1720
Mr = 787.01Dx = 1.215 Mg m3
Orthorhombic, P212121Mo Kα radiation λ = 0.71073 Å
Hall symbol: P 2ac 2abCell parameters from 3975 reflections
a = 8.3044 (7) Åθ = 2.2–20.3º
b = 13.2927 (11) ŵ = 0.09 mm1
c = 38.964 (3) ÅT = 293 (2) K
V = 4301.1 (6) Å3Prismatic, colorless
Z = 40.43 × 0.31 × 0.21 mm
Bruker SMART APEX CCD area-detector diffractometer3467 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.084
Monochromator: graphiteθmax = 27.0º
T = 293(2) Kθmin = 1.6º
φ and ω scansh = −8→10
Absorption correction: nonek = −16→16
25549 measured reflectionsl = −49→36
5269 independent reflections
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.045H-atom parameters constrained
wR(F2) = 0.099  w = 1/[σ2(Fo2) + (0.0447P)2] where P = (Fo2 + 2Fc2)/3
S = 0.89(Δ/σ)max = 0.001
5269 reflectionsΔρmax = 0.21 e Å3
505 parametersΔρmin = −0.16 e Å3
Primary atom site location: structure-invariant direct methodsExtinction correction: none
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O1−0.1448 (3)0.78606 (18)0.37658 (5)0.0555 (6)
H1−0.15130.73950.39030.067*
O20.0242 (2)0.70266 (16)0.15197 (5)0.0478 (6)
H20.05850.67140.13510.057*
O30.2082 (2)0.59757 (13)0.10544 (5)0.0332 (5)
O40.0549 (2)0.69683 (12)0.07077 (5)0.0355 (5)
O50.1065 (3)0.42488 (12)0.06866 (5)0.0410 (5)
H5A0.13280.41170.08910.049*
O6−0.1631 (3)0.45653 (15)0.02402 (6)0.0564 (7)
H6−0.10480.40600.02170.068*
O7−0.1595 (3)0.65240 (15)−0.00867 (6)0.0554 (6)
H7−0.24450.6200−0.01010.066*
O80.0245 (2)0.89395 (12)0.04299 (5)0.0383 (5)
O9−0.0675 (3)0.99980 (13)0.00267 (5)0.0494 (6)
O100.0865 (3)1.06672 (15)0.08776 (5)0.0536 (6)
H100.07491.01050.09630.064*
O110.1701 (2)1.23411 (14)0.04880 (5)0.0436 (5)
H110.13461.29050.05170.052*
O12−0.0620 (3)1.27492 (13)−0.00414 (6)0.0588 (7)
H12A−0.12581.2720−0.02080.071*
O131.0284 (5)0.9088 (2)0.13462 (9)0.1152 (12)
H13A1.03340.84640.13870.138*
C1−0.0982 (4)0.7430 (3)0.28168 (8)0.0577 (10)
H1A−0.17080.76100.26320.069*
H1B−0.08660.67040.28160.069*
C2−0.1738 (4)0.7753 (3)0.31584 (8)0.0598 (10)
H2A−0.19780.84670.31500.072*
H2B−0.27440.73950.31910.072*
C3−0.0647 (4)0.7546 (2)0.34554 (8)0.0437 (8)
H3−0.04900.68160.34690.052*
C40.1004 (4)0.8032 (2)0.34246 (7)0.0388 (7)
C50.1721 (3)0.7717 (2)0.30679 (7)0.0353 (7)
H50.17910.69820.30810.042*
C60.3460 (4)0.8051 (3)0.30089 (8)0.0550 (9)
H6A0.34820.87640.29560.066*
H6B0.40800.79450.32170.066*
C70.4216 (4)0.7463 (3)0.27159 (8)0.0556 (10)
H7A0.42760.67600.27810.067*
H7B0.53090.77020.26820.067*
C80.3295 (3)0.7549 (2)0.23745 (7)0.0361 (7)
C90.1476 (3)0.7339 (2)0.24388 (7)0.0326 (7)
H90.14290.66270.25030.039*
C100.0674 (4)0.7909 (2)0.27473 (7)0.0368 (7)
C110.0535 (4)0.7403 (2)0.21037 (7)0.0433 (8)
H11A−0.05750.72220.21500.052*
H11B0.05420.80980.20270.052*
C120.1155 (3)0.6744 (2)0.18123 (7)0.0343 (7)
H120.09240.60390.18670.041*
C130.2970 (3)0.6870 (2)0.17658 (7)0.0299 (6)
H130.31480.75650.16910.036*
C140.3875 (3)0.6743 (2)0.21106 (7)0.0348 (7)
C150.5622 (4)0.6825 (3)0.19860 (8)0.0508 (9)
H15A0.63530.65250.21510.061*
H15B0.59210.75230.19520.061*
C160.5670 (4)0.6248 (3)0.16445 (8)0.0510 (9)
H16A0.61020.55770.16790.061*
H16B0.63440.65980.14800.061*
C170.3895 (3)0.6188 (2)0.15113 (7)0.0349 (7)
H170.35290.54990.15550.042*
C180.3600 (5)0.8615 (2)0.22343 (9)0.0596 (10)
H18A0.28320.87620.20570.089*
H18B0.46690.86520.21410.089*
H18C0.34900.90950.24170.089*
C190.0399 (5)0.9034 (2)0.26662 (9)0.0659 (11)
H19A0.00070.91030.24360.099*
H19B0.13970.93920.26890.099*
H19C−0.03780.93060.28230.099*
C200.3724 (3)0.6361 (2)0.11227 (7)0.0355 (7)
C210.4888 (4)0.5676 (2)0.09287 (8)0.0553 (9)
H21A0.47760.49980.10110.083*
H21B0.59730.59010.09660.083*
H21C0.46470.56980.06880.083*
C220.3795 (4)0.7460 (2)0.10016 (8)0.0459 (8)
H22A0.36570.74600.07540.055*
H22B0.28710.78050.10980.055*
C230.5271 (5)0.8082 (3)0.10821 (10)0.0629 (10)
H23A0.53200.82080.13270.075*
H23B0.62290.77110.10170.075*
C240.5236 (4)0.9067 (3)0.08935 (10)0.0587 (10)
H240.54100.90300.06580.070*
C250.4993 (4)0.9973 (3)0.10175 (9)0.0549 (9)
C260.4625 (6)1.0201 (3)0.13858 (11)0.0854 (13)
H26A0.35431.04500.14050.128*
H26B0.53621.07020.14690.128*
H26C0.47340.96000.15200.128*
C270.5084 (5)1.0876 (3)0.07860 (10)0.0718 (12)
H27A0.60621.12380.08310.108*
H27B0.41781.13070.08280.108*
H27C0.50711.06600.05510.108*
C280.2058 (4)0.7593 (3)0.37114 (8)0.0678 (11)
H28A0.30920.79160.37090.102*
H28B0.21940.68840.36750.102*
H28C0.15490.77050.39290.102*
C290.0899 (5)0.9178 (2)0.34767 (9)0.0641 (11)
H29A−0.01380.94130.34030.096*
H29B0.17250.95020.33440.096*
H29C0.10450.93330.37150.096*
C300.3678 (4)0.5653 (2)0.22474 (8)0.0505 (9)
H30A0.39150.51840.20670.076*
H30B0.25910.55550.23240.076*
H30C0.44060.55470.24350.076*
C420.8920 (6)0.9444 (3)0.15107 (13)0.1016 (17)
H42A0.84030.89010.16300.152*
H42B0.81920.97210.13440.152*
H42C0.92200.99570.16720.152*
C1A0.1450 (3)0.60535 (18)0.07231 (7)0.0301 (7)
H1A10.23110.60510.05510.036*
C2A0.0281 (4)0.52007 (18)0.06611 (7)0.0316 (7)
H2A1−0.05850.52350.08320.038*
C3A−0.0432 (4)0.53004 (18)0.03063 (7)0.0331 (7)
H3A0.04300.52290.01360.040*
C4A−0.1214 (4)0.6325 (2)0.02629 (7)0.0366 (7)
H4A−0.21990.63550.04010.044*
C5A−0.0067 (3)0.71584 (18)0.03752 (7)0.0317 (7)
H5A10.08300.71980.02120.038*
C6A−0.0913 (4)0.8157 (2)0.03872 (9)0.0416 (8)
H6A1−0.15080.82620.01760.050*
H6A2−0.16700.81670.05770.050*
C1B−0.0405 (4)0.98966 (18)0.03842 (8)0.0361 (7)
H1B1−0.14220.99590.05100.043*
C2B0.0804 (4)1.06560 (19)0.05159 (7)0.0337 (7)
H2B10.18731.04870.04260.040*
C3B0.0367 (4)1.17108 (18)0.04037 (7)0.0347 (7)
H3B−0.05721.19340.05360.042*
C4B−0.0042 (4)1.17607 (19)0.00276 (8)0.0400 (8)
H4B0.09351.1640−0.01070.048*
C5B−0.1275 (5)1.0974 (2)−0.00591 (9)0.0551 (10)
H5B1−0.22591.11040.00670.066*
H5B2−0.15211.1002−0.03020.066*
U11U22U33U12U13U23
O10.0617 (15)0.0692 (16)0.0356 (13)−0.0109 (13)0.0146 (11)−0.0030 (11)
O20.0348 (12)0.0773 (15)0.0312 (11)0.0163 (11)−0.0092 (10)−0.0133 (11)
O30.0385 (11)0.0318 (10)0.0293 (11)0.0001 (9)−0.0021 (9)−0.0018 (9)
O40.0495 (12)0.0212 (9)0.0356 (11)0.0047 (9)−0.0054 (10)−0.0023 (9)
O50.0643 (15)0.0236 (10)0.0350 (11)0.0072 (10)−0.0016 (11)−0.0019 (9)
O60.0563 (15)0.0287 (11)0.0840 (18)−0.0062 (11)−0.0208 (14)−0.0112 (12)
O70.0634 (16)0.0416 (12)0.0613 (16)−0.0077 (12)−0.0271 (13)0.0009 (11)
O80.0368 (11)0.0198 (9)0.0585 (14)−0.0011 (9)−0.0072 (10)0.0026 (9)
O90.0730 (16)0.0220 (10)0.0533 (14)−0.0001 (11)−0.0240 (13)−0.0018 (10)
O100.0816 (17)0.0382 (12)0.0410 (13)−0.0050 (12)−0.0082 (13)0.0031 (10)
O110.0510 (13)0.0217 (10)0.0580 (14)−0.0023 (10)−0.0099 (11)−0.0066 (10)
O120.0804 (17)0.0240 (11)0.0721 (16)0.0042 (11)−0.0285 (14)0.0032 (11)
O130.132 (3)0.078 (2)0.136 (3)0.024 (2)0.057 (2)0.036 (2)
C10.0291 (17)0.105 (3)0.0393 (19)−0.0002 (19)−0.0025 (16)−0.012 (2)
C20.0330 (18)0.106 (3)0.041 (2)−0.003 (2)0.0072 (16)−0.007 (2)
C30.0475 (19)0.0480 (18)0.0355 (18)−0.0041 (16)0.0082 (16)−0.0025 (15)
C40.0415 (18)0.0449 (18)0.0299 (16)−0.0049 (15)0.0018 (14)−0.0048 (14)
C50.0366 (17)0.0378 (16)0.0315 (16)−0.0015 (14)−0.0014 (13)−0.0074 (14)
C60.041 (2)0.087 (3)0.0374 (19)−0.0151 (19)−0.0019 (16)−0.0193 (19)
C70.0280 (17)0.099 (3)0.0398 (19)−0.0020 (19)−0.0025 (15)−0.019 (2)
C80.0297 (16)0.0453 (18)0.0332 (16)−0.0040 (14)−0.0014 (13)−0.0067 (14)
C90.0279 (15)0.0382 (16)0.0316 (16)0.0010 (13)−0.0045 (13)−0.0024 (13)
C100.0335 (17)0.0454 (18)0.0315 (16)0.0072 (14)−0.0002 (13)−0.0004 (14)
C110.0276 (16)0.066 (2)0.0360 (18)0.0071 (16)−0.0014 (14)−0.0041 (16)
C120.0250 (15)0.0467 (18)0.0311 (16)−0.0025 (13)−0.0038 (13)−0.0037 (14)
C130.0284 (15)0.0306 (15)0.0306 (16)0.0018 (13)−0.0016 (13)−0.0036 (13)
C140.0273 (16)0.0434 (17)0.0339 (17)0.0031 (14)−0.0044 (13)−0.0042 (14)
C150.0286 (18)0.080 (2)0.043 (2)0.0047 (18)−0.0049 (15)−0.0126 (19)
C160.0325 (18)0.070 (2)0.051 (2)0.0158 (18)0.0010 (16)−0.0043 (18)
C170.0328 (16)0.0348 (16)0.0372 (17)0.0065 (13)−0.0019 (14)−0.0043 (14)
C180.075 (3)0.049 (2)0.054 (2)−0.023 (2)0.022 (2)−0.0168 (18)
C190.101 (3)0.055 (2)0.041 (2)0.033 (2)0.015 (2)0.0047 (17)
C200.0318 (16)0.0403 (16)0.0345 (17)0.0049 (14)−0.0002 (14)−0.0065 (14)
C210.054 (2)0.071 (2)0.042 (2)0.0104 (19)0.0031 (18)−0.0154 (18)
C220.048 (2)0.054 (2)0.0360 (18)−0.0120 (17)−0.0008 (15)0.0009 (16)
C230.060 (2)0.066 (2)0.063 (2)−0.015 (2)0.001 (2)0.002 (2)
C240.064 (2)0.056 (2)0.056 (2)−0.018 (2)0.001 (2)0.0047 (19)
C250.048 (2)0.061 (2)0.056 (2)−0.0144 (18)−0.0009 (18)0.001 (2)
C260.091 (3)0.078 (3)0.087 (3)−0.011 (3)0.004 (3)−0.005 (3)
C270.066 (3)0.061 (2)0.089 (3)−0.011 (2)−0.016 (2)0.012 (2)
C280.055 (2)0.114 (3)0.0339 (19)0.005 (2)−0.0049 (17)−0.003 (2)
C290.089 (3)0.054 (2)0.049 (2)−0.020 (2)0.025 (2)−0.0180 (18)
C300.058 (2)0.053 (2)0.0408 (19)0.0216 (18)−0.0010 (17)0.0010 (16)
C420.098 (4)0.079 (3)0.128 (4)0.024 (3)0.011 (4)0.027 (3)
C1A0.0401 (17)0.0214 (14)0.0289 (16)0.0023 (13)0.0021 (14)−0.0015 (12)
C2A0.0420 (17)0.0181 (13)0.0348 (16)0.0017 (13)0.0071 (14)−0.0037 (12)
C3A0.0397 (17)0.0236 (14)0.0359 (17)−0.0028 (13)−0.0034 (14)−0.0079 (13)
C4A0.0425 (18)0.0263 (14)0.0410 (18)−0.0012 (14)−0.0051 (15)−0.0031 (13)
C5A0.0357 (16)0.0266 (14)0.0329 (16)−0.0017 (13)−0.0021 (13)−0.0001 (12)
C6A0.0417 (18)0.0252 (15)0.058 (2)−0.0049 (14)−0.0047 (16)0.0017 (15)
C1B0.0426 (18)0.0196 (14)0.0460 (19)−0.0010 (13)−0.0028 (15)0.0020 (13)
C2B0.0388 (17)0.0283 (15)0.0340 (17)0.0006 (13)−0.0004 (14)−0.0013 (13)
C3B0.0406 (18)0.0214 (14)0.0420 (18)−0.0009 (13)−0.0003 (15)−0.0062 (13)
C4B0.055 (2)0.0183 (14)0.0469 (19)0.0024 (14)−0.0043 (16)0.0011 (13)
C5B0.079 (3)0.0264 (16)0.059 (2)0.0001 (17)−0.028 (2)0.0042 (16)
O1—C31.442 (3)C16—C171.565 (4)
O1—H10.8206C16—H16A0.9700
O2—C121.419 (3)C16—H16B0.9700
O2—H20.8267C17—C201.538 (4)
O3—C1A1.398 (3)C17—H170.9800
O3—C201.481 (3)C18—H18A0.9600
O4—C5A1.416 (3)C18—H18B0.9600
O4—C1A1.429 (3)C18—H18C0.9600
O5—C2A1.426 (3)C19—H19A0.9600
O5—H5A0.8444C19—H19B0.9600
O6—C3A1.418 (3)C19—H19C0.9600
O6—H60.8326C20—C211.528 (4)
O7—C4A1.423 (3)C20—C221.536 (4)
O7—H70.8293C21—H21A0.9600
O8—C1B1.393 (3)C21—H21B0.9600
O8—C6A1.426 (3)C21—H21C0.9600
O9—C1B1.418 (3)C22—C231.512 (4)
O9—C5B1.429 (3)C22—H22A0.9700
O10—C2B1.410 (3)C22—H22B0.9700
O10—H100.8225C23—C241.501 (5)
O11—C3B1.427 (3)C23—H23A0.9700
O11—H110.8128C23—H23B0.9700
O12—C4B1.424 (3)C24—C251.313 (5)
O12—H12A0.8392C24—H240.9300
O13—C421.385 (5)C25—C261.498 (5)
O13—H13A0.8463C25—C271.503 (5)
C1—C21.533 (4)C26—H26A0.9600
C1—C101.539 (4)C26—H26B0.9600
C1—H1A0.9700C26—H26C0.9600
C1—H1B0.9700C27—H27A0.9600
C2—C31.495 (4)C27—H27B0.9600
C2—H2A0.9700C27—H27C0.9600
C2—H2B0.9700C28—H28A0.9600
C3—C41.520 (4)C28—H28B0.9600
C3—H30.9800C28—H28C0.9600
C4—C281.535 (4)C29—H29A0.9600
C4—C291.539 (4)C29—H29B0.9600
C4—C51.569 (4)C29—H29C0.9600
C5—C61.529 (4)C30—H30A0.9600
C5—C101.543 (4)C30—H30B0.9600
C5—H50.9800C30—H30C0.9600
C6—C71.519 (4)C42—H42A0.9600
C6—H6A0.9700C42—H42B0.9600
C6—H6B0.9700C42—H42C0.9600
C7—C81.539 (4)C1A—C2A1.511 (4)
C7—H7A0.9700C1A—H1A10.9800
C7—H7B0.9700C2A—C3A1.510 (4)
C8—C181.539 (4)C2A—H2A10.9800
C8—C91.557 (4)C3A—C4A1.518 (4)
C8—C141.562 (4)C3A—H3A0.9800
C9—C111.524 (4)C4A—C5A1.526 (4)
C9—C101.569 (4)C4A—H4A0.9800
C9—H90.9800C5A—C6A1.503 (4)
C10—C191.545 (4)C5A—H5A10.9800
C11—C121.524 (4)C6A—H6A10.9700
C11—H11A0.9700C6A—H6A20.9700
C11—H11B0.9700C1B—C2B1.513 (4)
C12—C131.528 (4)C1B—H1B10.9800
C12—H120.9800C2B—C3B1.513 (4)
C13—C171.547 (4)C2B—H2B10.9800
C13—C141.549 (4)C3B—C4B1.506 (4)
C13—H130.9800C3B—H3B0.9800
C14—C151.534 (4)C4B—C5B1.502 (4)
C14—C301.552 (4)C4B—H4B0.9800
C15—C161.536 (4)C5B—H5B10.9700
C15—H15A0.9700C5B—H5B20.9700
C15—H15B0.9700
C3—O1—H1111.1O3—C20—C17102.1 (2)
C12—O2—H2108.6C21—C20—C17109.8 (2)
C1A—O3—C20119.1 (2)C22—C20—C17116.2 (2)
C5A—O4—C1A112.29 (19)C20—C21—H21A109.5
C2A—O5—H5A111.6C20—C21—H21B109.5
C3A—O6—H699.6H21A—C21—H21B109.5
C4A—O7—H799.1C20—C21—H21C109.5
C1B—O8—C6A113.0 (2)H21A—C21—H21C109.5
C1B—O9—C5B111.8 (2)H21B—C21—H21C109.5
C2B—O10—H10112.8C23—C22—C20119.2 (3)
C3B—O11—H11106.9C23—C22—H22A107.5
C4B—O12—H12A108.5C20—C22—H22A107.5
C42—O13—H13A106.7C23—C22—H22B107.5
C2—C1—C10113.8 (3)C20—C22—H22B107.5
C2—C1—H1A108.8H22A—C22—H22B107.0
C10—C1—H1A108.8C24—C23—C22111.1 (3)
C2—C1—H1B108.8C24—C23—H23A109.4
C10—C1—H1B108.8C22—C23—H23A109.4
H1A—C1—H1B107.7C24—C23—H23B109.4
C3—C2—C1111.8 (3)C22—C23—H23B109.4
C3—C2—H2A109.2H23A—C23—H23B108.0
C1—C2—H2A109.2C25—C24—C23128.5 (4)
C3—C2—H2B109.2C25—C24—H24115.7
C1—C2—H2B109.2C23—C24—H24115.7
H2A—C2—H2B107.9C24—C25—C26124.7 (4)
O1—C3—C2108.4 (3)C24—C25—C27120.3 (3)
O1—C3—C4111.0 (2)C26—C25—C27115.0 (3)
C2—C3—C4114.0 (3)C25—C26—H26A109.5
O1—C3—H3107.7C25—C26—H26B109.5
C2—C3—H3107.7H26A—C26—H26B109.5
C4—C3—H3107.7C25—C26—H26C109.5
C3—C4—C28107.2 (3)H26A—C26—H26C109.5
C3—C4—C29111.0 (3)H26B—C26—H26C109.5
C28—C4—C29108.2 (3)C25—C27—H27A109.5
C3—C4—C5107.4 (2)C25—C27—H27B109.5
C28—C4—C5109.1 (2)H27A—C27—H27B109.5
C29—C4—C5113.7 (3)C25—C27—H27C109.5
C6—C5—C10111.3 (3)H27A—C27—H27C109.5
C6—C5—C4114.5 (2)H27B—C27—H27C109.5
C10—C5—C4117.3 (2)C4—C28—H28A109.5
C6—C5—H5104.0C4—C28—H28B109.5
C10—C5—H5104.0H28A—C28—H28B109.5
C4—C5—H5104.0C4—C28—H28C109.5
C7—C6—C5110.7 (3)H28A—C28—H28C109.5
C7—C6—H6A109.5H28B—C28—H28C109.5
C5—C6—H6A109.5C4—C29—H29A109.5
C7—C6—H6B109.5C4—C29—H29B109.5
C5—C6—H6B109.5H29A—C29—H29B109.5
H6A—C6—H6B108.1C4—C29—H29C109.5
C6—C7—C8114.0 (3)H29A—C29—H29C109.5
C6—C7—H7A108.8H29B—C29—H29C109.5
C8—C7—H7A108.8C14—C30—H30A109.5
C6—C7—H7B108.8C14—C30—H30B109.5
C8—C7—H7B108.8H30A—C30—H30B109.5
H7A—C7—H7B107.7C14—C30—H30C109.5
C7—C8—C18107.1 (3)H30A—C30—H30C109.5
C7—C8—C9109.3 (2)H30B—C30—H30C109.5
C18—C8—C9112.5 (3)O13—C42—H42A109.5
C7—C8—C14111.4 (3)O13—C42—H42B109.5
C18—C8—C14110.3 (2)H42A—C42—H42B109.5
C9—C8—C14106.4 (2)O13—C42—H42C109.5
C11—C9—C8110.4 (2)H42A—C42—H42C109.5
C11—C9—C10114.3 (2)H42B—C42—H42C109.5
C8—C9—C10116.6 (2)O3—C1A—O4107.4 (2)
C11—C9—H9104.7O3—C1A—C2A109.5 (2)
C8—C9—H9104.7O4—C1A—C2A107.2 (2)
C10—C9—H9104.7O3—C1A—H1A1110.9
C1—C10—C5107.0 (2)O4—C1A—H1A1110.9
C1—C10—C19107.7 (3)C2A—C1A—H1A1110.9
C5—C10—C19114.1 (3)O5—C2A—C3A108.7 (2)
C1—C10—C9108.3 (2)O5—C2A—C1A111.2 (2)
C5—C10—C9107.5 (2)C3A—C2A—C1A109.4 (2)
C19—C10—C9111.9 (2)O5—C2A—H2A1109.2
C12—C11—C9115.7 (2)C3A—C2A—H2A1109.2
C12—C11—H11A108.4C1A—C2A—H2A1109.2
C9—C11—H11A108.4O6—C3A—C2A112.4 (2)
C12—C11—H11B108.4O6—C3A—C4A107.3 (2)
C9—C11—H11B108.4C2A—C3A—C4A110.4 (2)
H11A—C11—H11B107.4O6—C3A—H3A108.9
O2—C12—C11105.4 (2)C2A—C3A—H3A108.9
O2—C12—C13113.7 (2)C4A—C3A—H3A108.9
C11—C12—C13111.0 (2)O7—C4A—C3A111.6 (2)
O2—C12—H12108.8O7—C4A—C5A106.1 (2)
C11—C12—H12108.8C3A—C4A—C5A110.6 (2)
C13—C12—H12108.8O7—C4A—H4A109.5
C12—C13—C17120.1 (2)C3A—C4A—H4A109.5
C12—C13—C14111.3 (2)C5A—C4A—H4A109.5
C17—C13—C14104.6 (2)O4—C5A—C6A107.4 (2)
C12—C13—H13106.7O4—C5A—C4A111.0 (2)
C17—C13—H13106.7C6A—C5A—C4A111.0 (2)
C14—C13—H13106.7O4—C5A—H5A1109.1
C15—C14—C13100.2 (2)C6A—C5A—H5A1109.1
C15—C14—C30105.9 (3)C4A—C5A—H5A1109.1
C13—C14—C30110.4 (2)O8—C6A—C5A109.5 (2)
C15—C14—C8116.8 (2)O8—C6A—H6A1109.8
C13—C14—C8110.3 (2)C5A—C6A—H6A1109.8
C30—C14—C8112.5 (2)O8—C6A—H6A2109.8
C14—C15—C16105.3 (2)C5A—C6A—H6A2109.8
C14—C15—H15A110.7H6A1—C6A—H6A2108.2
C16—C15—H15A110.7O8—C1B—O9105.9 (2)
C14—C15—H15B110.7O8—C1B—C2B108.0 (2)
C16—C15—H15B110.7O9—C1B—C2B112.0 (2)
H15A—C15—H15B108.8O8—C1B—H1B1110.3
C15—C16—C17106.7 (2)O9—C1B—H1B1110.3
C15—C16—H16A110.4C2B—C1B—H1B1110.3
C17—C16—H16A110.4O10—C2B—C3B106.7 (2)
C15—C16—H16B110.4O10—C2B—C1B111.7 (2)
C17—C16—H16B110.4C3B—C2B—C1B111.2 (2)
H16A—C16—H16B108.6O10—C2B—H2B1109.1
C20—C17—C13119.8 (2)C3B—C2B—H2B1109.1
C20—C17—C16114.0 (2)C1B—C2B—H2B1109.1
C13—C17—C16103.0 (2)O11—C3B—C4B111.9 (2)
C20—C17—H17106.4O11—C3B—C2B106.9 (2)
C13—C17—H17106.4C4B—C3B—C2B112.1 (2)
C16—C17—H17106.4O11—C3B—H3B108.6
C8—C18—H18A109.5C4B—C3B—H3B108.6
C8—C18—H18B109.5C2B—C3B—H3B108.6
H18A—C18—H18B109.5O12—C4B—C5B111.7 (3)
C8—C18—H18C109.5O12—C4B—C3B107.5 (2)
H18A—C18—H18C109.5C5B—C4B—C3B110.0 (3)
H18B—C18—H18C109.5O12—C4B—H4B109.2
C10—C19—H19A109.5C5B—C4B—H4B109.2
C10—C19—H19B109.5C3B—C4B—H4B109.2
H19A—C19—H19B109.5O9—C5B—C4B110.0 (3)
C10—C19—H19C109.5O9—C5B—H5B1109.7
H19A—C19—H19C109.5C4B—C5B—H5B1109.7
H19B—C19—H19C109.5O9—C5B—H5B2109.7
O3—C20—C21106.7 (2)C4B—C5B—H5B2109.7
O3—C20—C22108.0 (2)H5B1—C5B—H5B2108.2
C21—C20—C22113.0 (3)
D—H···AD—HH···AD···AD—H···A
O1—H1···O11i0.822.382.996 (3)133
O2—H2···O30.831.962.752 (3)160
O5—H5A···O1i0.842.142.839 (3)140
O6—H6···O12ii0.832.042.781 (3)147
O7—H7···O8iii0.832.313.009 (3)142
O10—H10···O13iv0.822.052.824 (4)156
O11—H11···O5v0.811.922.703 (3)162
O12—H12A···O11vi0.842.022.827 (3)162
O13—H13A···O2vii0.851.982.823 (3)173
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O1—H1⋯O11i0.822.382.996 (3)133
O2—H2⋯O30.831.962.752 (3)160
O5—H5A⋯O1i0.842.142.839 (3)140
O6—H6⋯O12ii0.832.042.781 (3)147
O7—H7⋯O8iii0.832.313.009 (3)142
O10—H10⋯O13iv0.822.052.824 (4)156
O11—H11⋯O5v0.811.922.703 (3)162
O12—H12A⋯O11vi0.842.022.827 (3)162
O13—H13A⋯O2vii0.851.982.823 (3)173

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) ; (vi) ; (vii) .

  1 in total

1.  A dammarane glycoside derived from ginsenoside Rb3.

Authors:  Kejiang He; Yong Liu; Yi Yang; Peng Li; Ling Yang
Journal:  Chem Pharm Bull (Tokyo)       Date:  2005-02       Impact factor: 1.645

  1 in total
  1 in total

1.  New metabolites from the biotransformation of ginsenoside Rb1 by Paecilomyces bainier sp.229 and activities in inducing osteogenic differentiation by Wnt/β-catenin signaling activation.

Authors:  Wei Zhou; Hai Huang; Haiyan Zhu; Pei Zhou; Xunlong Shi
Journal:  J Ginseng Res       Date:  2017-03-22       Impact factor: 6.060

  1 in total

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