Literature DB >> 21200706

4,4'-Bis(benzimidazol-1-yl)biphen-yl.

Zuo-Xi Li1, Yi Zuo, Tong-Liang Hu.   

Abstract

The mol-ecule of the title compound, C(26)H(18)N(4), resides on a crystallographic inversion centre with a dihedral angle of 44.94 (5)° between the benzimidazole ring system and the benzene ring. The primary hydrogen bond is C-H⋯N and inversion-related pairs of these generate a chain of rings along the c-axis direction; π⋯π stacking involving the benzimidazole groups with inter-planar separations of ca 3.4 Å complete the inter-actions.

Entities:  

Year:  2007        PMID: 21200706      PMCID: PMC2915210          DOI: 10.1107/S1600536807063350

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related literature, see: Bu et al. (2007 ▶); Buchwald et al. (2001 ▶); Cristau et al. (2004 ▶); Su et al. (2003 ▶).

Experimental

Crystal data

C26H18N4 M = 386.44 Monoclinic, a = 19.628 (4) Å b = 6.8964 (14) Å c = 13.760 (3) Å β = 90.74 (3)° V = 1862.4 (7) Å3 Z = 4 Mo Kα radiation μ = 0.08 mm−1 T = 293 (2) K 0.26 × 0.22 × 0.10 mm

Data collection

Bruker SMART 1000 CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 1998 ▶) T min = 0.904, T max = 1.000 (expected range = 0.897–0.992) 9091 measured reflections 1644 independent reflections 1415 reflections with I > 2σ(I) R int = 0.037

Refinement

R[F 2 > 2σ(F 2)] = 0.037 wR(F 2) = 0.103 S = 1.10 1644 reflections 137 parameters H-atom parameters constrained Δρmax = 0.18 e Å−3 Δρmin = −0.17 e Å−3 Data collection: SMART (Bruker, 1998 ▶); cell refinement: SAINT (Bruker, 1998 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 1997 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997 ▶); molecular graphics: SHELXTL (Bruker, 1998 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536807063350/gg2046sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536807063350/gg2046Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C26H18N4F000 = 808
Mr = 386.44Dx = 1.378 Mg m3
Monoclinic, C2/cMelting point: 566 K
Hall symbol: -c 2ycMo Kα radiation λ = 0.71073 Å
a = 19.628 (4) ÅCell parameters from 2932 reflections
b = 6.8964 (14) Åθ = 2.6–28.7º
c = 13.760 (3) ŵ = 0.08 mm1
β = 90.74 (3)ºT = 293 (2) K
V = 1862.4 (7) Å3Block, colorless
Z = 40.26 × 0.22 × 0.10 mm
Bruker SMART 1000 CCD diffractometer1644 independent reflections
Radiation source: fine-focus sealed tube1415 reflections with I > 2σ(I)
Monochromator: graphiteRint = 0.037
Detector resolution: 9 pixels mm-1θmax = 25.0º
T = 293(2) Kθmin = 3.0º
ω scansh = −23→23
Absorption correction: multi-scan(SADABS; Bruker, 1998)k = −8→8
Tmin = 0.904, Tmax = 1.000l = −16→16
9091 measured reflections
Refinement on F2Hydrogen site location: inferred from neighbouring sites
Least-squares matrix: fullH-atom parameters constrained
R[F2 > 2σ(F2)] = 0.037  w = 1/[σ2(Fo2) + (0.0718P)2 + 0.0391P] where P = (Fo2 + 2Fc2)/3
wR(F2) = 0.103(Δ/σ)max = 0.001
S = 1.10Δρmax = 0.18 e Å3
1644 reflectionsΔρmin = −0.17 e Å3
137 parametersExtinction correction: SHELXL, Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.032 (4)
Secondary atom site location: difference Fourier map
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
N10.22326 (5)0.98108 (14)0.82891 (7)0.0259 (3)
N20.28767 (5)0.99037 (13)0.69471 (7)0.0196 (3)
C10.28458 (6)0.99959 (16)0.79430 (8)0.0233 (3)
H10.32291.01750.83370.028*
C20.18197 (6)0.95587 (16)0.74690 (8)0.0217 (3)
C30.11196 (6)0.91962 (17)0.74020 (9)0.0271 (3)
H30.08540.91340.79560.033*
C40.08336 (6)0.89337 (17)0.64895 (9)0.0289 (4)
H40.03690.86940.64290.035*
C50.12330 (6)0.90221 (16)0.56532 (9)0.0269 (3)
H50.10250.88450.50490.032*
C60.19250 (6)0.93632 (16)0.56982 (8)0.0221 (3)
H60.21890.94100.51420.027*
C70.22077 (6)0.96335 (15)0.66211 (9)0.0197 (3)
C80.34804 (6)0.99569 (15)0.63884 (8)0.0191 (3)
C90.35123 (6)1.10302 (16)0.55419 (8)0.0239 (3)
H90.31361.17410.53310.029*
C100.41052 (6)1.10460 (16)0.50080 (9)0.0234 (3)
H100.41181.17700.44380.028*
C110.46851 (6)1.00092 (15)0.52969 (8)0.0195 (3)
C120.46409 (6)0.89818 (18)0.61685 (8)0.0268 (3)
H120.50210.83050.63960.032*
C130.40515 (6)0.89417 (18)0.67017 (8)0.0256 (3)
H130.40370.82290.72750.031*
U11U22U33U12U13U23
N10.0289 (6)0.0284 (6)0.0204 (6)−0.0051 (4)0.0060 (5)−0.0016 (4)
N20.0212 (6)0.0207 (5)0.0170 (6)−0.0025 (4)0.0038 (4)−0.0006 (4)
C10.0271 (7)0.0255 (6)0.0172 (7)−0.0033 (5)0.0019 (5)−0.0006 (5)
C20.0255 (6)0.0185 (6)0.0211 (7)−0.0009 (5)0.0058 (5)−0.0011 (5)
C30.0249 (7)0.0249 (7)0.0318 (8)−0.0006 (5)0.0103 (5)−0.0007 (5)
C40.0213 (6)0.0244 (7)0.0409 (8)−0.0001 (5)0.0012 (6)0.0000 (5)
C50.0279 (7)0.0235 (7)0.0292 (7)0.0013 (5)−0.0044 (5)−0.0002 (5)
C60.0267 (6)0.0191 (6)0.0206 (7)0.0014 (5)0.0015 (5)0.0008 (5)
C70.0212 (6)0.0155 (6)0.0226 (7)−0.0004 (4)0.0025 (5)0.0011 (4)
C80.0203 (6)0.0191 (6)0.0178 (6)−0.0045 (4)0.0034 (5)−0.0033 (4)
C90.0256 (6)0.0217 (7)0.0245 (7)0.0049 (5)0.0046 (5)0.0031 (5)
C100.0298 (7)0.0203 (6)0.0203 (6)0.0009 (5)0.0059 (5)0.0037 (5)
C110.0196 (7)0.0204 (6)0.0185 (7)−0.0070 (4)0.0003 (5)−0.0025 (4)
C120.0166 (6)0.0412 (8)0.0227 (7)−0.0021 (5)−0.0016 (5)0.0071 (5)
C130.0218 (6)0.0369 (7)0.0181 (7)−0.0055 (5)−0.0012 (5)0.0078 (5)
C9—C81.3822 (16)C5—C61.3790 (17)
C9—C101.3842 (16)C5—C41.4021 (18)
C9—H90.9300C5—H50.9300
N2—C11.3740 (15)C4—C31.3806 (18)
N2—C71.3945 (15)C4—H40.9300
N2—C81.4212 (15)C13—C121.3781 (16)
C10—C111.3974 (17)C13—C81.3856 (17)
C10—H100.9300C13—H130.9300
N1—C11.3063 (16)C12—H120.9300
N1—C21.3916 (16)C2—C31.3986 (17)
C11—C121.3967 (17)C3—H30.9300
C11—C11i1.491 (2)C6—H60.9300
C7—C61.3918 (17)C1—H10.9300
C7—C21.4024 (17)
C8—C9—C10119.93 (11)C12—C13—C8120.37 (11)
C8—C9—H9120.0C12—C13—H13119.8
C10—C9—H9120.0C8—C13—H13119.8
C1—N2—C7105.87 (10)C13—C12—C11121.94 (11)
C1—N2—C8125.89 (11)C13—C12—H12119.0
C7—N2—C8128.14 (10)C11—C12—H12119.0
C9—C10—C11122.16 (11)N1—C2—C3129.57 (11)
C9—C10—H10118.9N1—C2—C7110.69 (10)
C11—C10—H10118.9C3—C2—C7119.70 (11)
C1—N1—C2104.25 (10)C4—C3—C2118.10 (12)
C12—C11—C10116.39 (11)C4—C3—H3120.9
C12—C11—C11i121.83 (13)C2—C3—H3120.9
C10—C11—C11i121.78 (13)C9—C8—C13119.18 (11)
C6—C7—N2132.38 (11)C9—C8—N2121.11 (10)
C6—C7—C2122.66 (11)C13—C8—N2119.70 (11)
N2—C7—C2104.86 (10)C5—C6—C7116.40 (11)
C6—C5—C4122.10 (12)C5—C6—H6121.8
C6—C5—H5118.9C7—C6—H6121.8
C4—C5—H5118.9N1—C1—N2114.33 (12)
C3—C4—C5121.03 (11)N1—C1—H1122.8
C3—C4—H4119.5N2—C1—H1122.8
C5—C4—H4119.5
C8—C9—C10—C11−0.30 (18)C5—C4—C3—C20.17 (17)
C9—C10—C11—C12−1.33 (17)N1—C2—C3—C4−177.73 (11)
C9—C10—C11—C11i178.27 (12)C7—C2—C3—C4−0.38 (16)
C1—N2—C7—C6−177.15 (12)C10—C9—C8—C131.41 (16)
C8—N2—C7—C6−0.74 (18)C10—C9—C8—N2−179.55 (10)
C1—N2—C7—C2−0.74 (11)C12—C13—C8—C9−0.85 (17)
C8—N2—C7—C2175.68 (10)C12—C13—C8—N2−179.90 (10)
C6—C5—C4—C30.30 (18)C1—N2—C8—C9−138.05 (12)
C8—C13—C12—C11−0.85 (18)C7—N2—C8—C946.20 (15)
C10—C11—C12—C131.90 (17)C1—N2—C8—C1340.98 (16)
C11i—C11—C12—C13−177.70 (12)C7—N2—C8—C13−134.76 (12)
C1—N1—C2—C3176.54 (12)C4—C5—C6—C7−0.53 (17)
C1—N1—C2—C7−1.00 (12)N2—C7—C6—C5176.21 (11)
C6—C7—C2—N1177.95 (10)C2—C7—C6—C50.32 (16)
N2—C7—C2—N11.09 (12)C2—N1—C1—N20.52 (13)
C6—C7—C2—C30.13 (17)C7—N2—C1—N10.14 (13)
N2—C7—C2—C3−176.73 (10)C8—N2—C1—N1−176.38 (9)
D—H···AD—HH···AD···AD—H···A
C6—H6···N1ii0.932.613.425 (2)147
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C6—H6⋯N1i0.932.613.425 (2)147

Symmetry code: (i) .

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