| Literature DB >> 21200696 |
Abstract
In the title compound, C(8)H(7)N(3)O, there are two independent mol-ecules in the asymmetric unit, in which the angles between the pyridine ring and the isoxazole ring are 35.8 (6) and 10.6 (2)°. The crystal packing is stabilized by N-H⋯N hydrogen bonds, which result in the mol-ecules forming a two-dimensional supra-molecular layer.Entities:
Year: 2007 PMID: 21200696 PMCID: PMC2915201 DOI: 10.1107/S160053680706309X
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C8H7N3O | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 2830 reflections |
| θ = 2.4–25.9º | |
| µ = 0.10 mm−1 | |
| β = 106.9870 (10)º | Block, colourless |
| 0.42 × 0.18 × 0.10 mm | |
| Bruker APEX CCD area-detector diffractometer | 3018 independent reflections |
| Radiation source: fine-focus sealed tube | 2509 reflections with |
| Monochromator: graphite | |
| θmax = 26.0º | |
| φ and ω scans | θmin = 1.5º |
| Absorption correction: multi-scan(SADABS; Sheldrick, 1996) | |
| 8396 measured reflections |
| Refinement on | Hydrogen site location: inferred from neighbouring sites |
| Least-squares matrix: full | H-atom parameters constrained |
| | |
| (Δ/σ)max < 0.001 | |
| Δρmax = 0.23 e Å−3 | |
| 3018 reflections | Δρmin = −0.23 e Å−3 |
| 218 parameters | Extinction correction: SHELXL97 (Sheldrick, 1997), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
| Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.0047 (10) |
| Secondary atom site location: difference Fourier map |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| O1 | 0.46333 (7) | 0.85688 (9) | 0.20940 (11) | 0.0346 (3) | |
| O2 | 0.00420 (8) | 0.88480 (9) | 0.77638 (11) | 0.0336 (3) | |
| N1 | 0.79693 (9) | 0.83254 (13) | −0.07659 (13) | 0.0383 (3) | |
| N2 | 0.52225 (9) | 0.80823 (11) | 0.13072 (13) | 0.0337 (3) | |
| N3 | 0.44141 (10) | 1.03237 (12) | 0.31848 (14) | 0.0388 (3) | |
| H3A | 0.3946 | 0.9950 | 0.3407 | 0.047* | |
| H3B | 0.4558 | 1.1086 | 0.3447 | 0.047* | |
| N4 | 0.28672 (10) | 0.90935 (13) | 0.40458 (14) | 0.0398 (3) | |
| N5 | 0.06798 (9) | 0.93321 (11) | 0.70626 (14) | 0.0359 (3) | |
| N6 | −0.06051 (10) | 0.70441 (11) | 0.81376 (14) | 0.0377 (3) | |
| H6A | −0.0927 | 0.7458 | 0.8606 | 0.045* | |
| H6B | −0.0675 | 0.6246 | 0.8048 | 0.045* | |
| C1 | 0.72429 (11) | 0.75481 (15) | −0.08875 (15) | 0.0358 (4) | |
| H1 | 0.7222 | 0.6830 | −0.1430 | 0.043* | |
| C2 | 0.65244 (11) | 0.77244 (14) | −0.02749 (15) | 0.0346 (4) | |
| H2 | 0.6026 | 0.7141 | −0.0398 | 0.042* | |
| C3 | 0.65383 (10) | 0.87660 (13) | 0.05244 (14) | 0.0271 (3) | |
| C4 | 0.72841 (11) | 0.95824 (14) | 0.06540 (16) | 0.0368 (4) | |
| H4 | 0.7322 | 1.0310 | 0.1188 | 0.044* | |
| C5 | 0.79718 (12) | 0.93253 (15) | −0.00027 (18) | 0.0419 (4) | |
| H5 | 0.8477 | 0.9896 | 0.0096 | 0.050* | |
| C6 | 0.58040 (10) | 0.89855 (13) | 0.12468 (13) | 0.0270 (3) | |
| C7 | 0.49043 (11) | 0.97363 (13) | 0.24510 (14) | 0.0289 (3) | |
| C8 | 0.56482 (10) | 1.00383 (13) | 0.19470 (14) | 0.0292 (3) | |
| H8 | 0.5984 | 1.0793 | 0.2049 | 0.035* | |
| C9 | 0.29569 (12) | 0.80896 (15) | 0.48351 (17) | 0.0399 (4) | |
| H9 | 0.3461 | 0.7540 | 0.4845 | 0.048* | |
| C10 | 0.23625 (11) | 0.77991 (14) | 0.56385 (16) | 0.0351 (4) | |
| H10 | 0.2452 | 0.7065 | 0.6170 | 0.042* | |
| C11 | 0.16304 (10) | 0.86076 (13) | 0.56504 (14) | 0.0286 (3) | |
| C12 | 0.15291 (11) | 0.96543 (14) | 0.48390 (15) | 0.0331 (4) | |
| H12 | 0.1038 | 1.0227 | 0.4820 | 0.040* | |
| C13 | 0.21520 (12) | 0.98536 (15) | 0.40568 (16) | 0.0379 (4) | |
| H13 | 0.2068 | 1.0570 | 0.3496 | 0.045* | |
| C14 | 0.09696 (10) | 0.83758 (13) | 0.65003 (14) | 0.0272 (3) | |
| C15 | 0.05754 (11) | 0.72799 (13) | 0.67909 (15) | 0.0310 (3) | |
| H15 | 0.0689 | 0.6476 | 0.6514 | 0.037* | |
| C16 | −0.00128 (10) | 0.76260 (13) | 0.75652 (14) | 0.0274 (3) |
| O1 | 0.0346 (6) | 0.0288 (6) | 0.0488 (6) | −0.0019 (4) | 0.0251 (5) | −0.0016 (5) |
| O2 | 0.0403 (6) | 0.0237 (5) | 0.0474 (6) | −0.0025 (4) | 0.0294 (5) | −0.0020 (4) |
| N1 | 0.0352 (7) | 0.0459 (8) | 0.0394 (7) | 0.0043 (6) | 0.0198 (6) | 0.0003 (6) |
| N2 | 0.0330 (7) | 0.0304 (7) | 0.0443 (7) | 0.0000 (5) | 0.0216 (6) | −0.0034 (5) |
| N3 | 0.0443 (8) | 0.0306 (7) | 0.0545 (8) | −0.0018 (6) | 0.0347 (7) | −0.0025 (6) |
| N4 | 0.0369 (8) | 0.0452 (8) | 0.0452 (7) | −0.0045 (6) | 0.0242 (6) | −0.0018 (6) |
| N5 | 0.0415 (8) | 0.0270 (7) | 0.0502 (8) | −0.0038 (6) | 0.0303 (6) | 0.0000 (6) |
| N6 | 0.0488 (8) | 0.0247 (7) | 0.0527 (8) | −0.0031 (6) | 0.0353 (7) | −0.0018 (6) |
| C1 | 0.0382 (9) | 0.0391 (9) | 0.0328 (8) | 0.0022 (7) | 0.0146 (7) | −0.0053 (7) |
| C2 | 0.0331 (8) | 0.0370 (9) | 0.0361 (8) | −0.0039 (7) | 0.0138 (7) | −0.0038 (7) |
| C3 | 0.0270 (7) | 0.0287 (8) | 0.0268 (7) | 0.0030 (6) | 0.0098 (6) | 0.0026 (6) |
| C4 | 0.0364 (9) | 0.0340 (9) | 0.0458 (9) | −0.0031 (7) | 0.0209 (7) | −0.0060 (7) |
| C5 | 0.0382 (9) | 0.0418 (9) | 0.0538 (10) | −0.0065 (7) | 0.0263 (8) | −0.0063 (8) |
| C6 | 0.0251 (7) | 0.0283 (7) | 0.0284 (7) | 0.0005 (6) | 0.0088 (6) | 0.0043 (6) |
| C7 | 0.0321 (8) | 0.0258 (8) | 0.0313 (7) | 0.0020 (6) | 0.0129 (6) | 0.0030 (6) |
| C8 | 0.0308 (8) | 0.0269 (7) | 0.0343 (7) | −0.0030 (6) | 0.0164 (6) | −0.0006 (6) |
| C9 | 0.0351 (9) | 0.0421 (10) | 0.0491 (9) | 0.0051 (7) | 0.0225 (7) | 0.0015 (8) |
| C10 | 0.0353 (8) | 0.0328 (8) | 0.0417 (8) | 0.0037 (7) | 0.0181 (7) | 0.0040 (7) |
| C11 | 0.0270 (7) | 0.0300 (8) | 0.0312 (7) | −0.0035 (6) | 0.0124 (6) | −0.0026 (6) |
| C12 | 0.0336 (8) | 0.0314 (8) | 0.0398 (8) | 0.0011 (6) | 0.0193 (7) | 0.0023 (7) |
| C13 | 0.0431 (9) | 0.0347 (9) | 0.0423 (9) | −0.0030 (7) | 0.0225 (7) | 0.0038 (7) |
| C14 | 0.0266 (7) | 0.0268 (7) | 0.0301 (7) | 0.0015 (6) | 0.0113 (6) | 0.0017 (6) |
| C15 | 0.0387 (8) | 0.0223 (7) | 0.0386 (8) | 0.0016 (6) | 0.0214 (7) | 0.0006 (6) |
| C16 | 0.0309 (7) | 0.0227 (7) | 0.0322 (7) | 0.0010 (6) | 0.0150 (6) | 0.0016 (6) |
| O1—C7 | 1.3527 (17) | C3—C4 | 1.386 (2) |
| O1—N2 | 1.4295 (14) | C3—C6 | 1.4798 (18) |
| O2—C16 | 1.3490 (17) | C4—C5 | 1.382 (2) |
| O2—N5 | 1.4237 (14) | C4—H4 | 0.9500 |
| N1—C5 | 1.332 (2) | C5—H5 | 0.9500 |
| N1—C1 | 1.339 (2) | C6—C8 | 1.3999 (19) |
| N2—C6 | 1.3164 (18) | C7—C8 | 1.3677 (19) |
| N3—C7 | 1.3319 (18) | C8—H8 | 0.9500 |
| N3—H3A | 0.8800 | C9—C10 | 1.383 (2) |
| N3—H3B | 0.8800 | C9—H9 | 0.9500 |
| N4—C9 | 1.336 (2) | C10—C11 | 1.392 (2) |
| N4—C13 | 1.339 (2) | C10—H10 | 0.9500 |
| N5—C14 | 1.3145 (17) | C11—C12 | 1.385 (2) |
| N6—C16 | 1.3322 (18) | C11—C14 | 1.4847 (18) |
| N6—H6A | 0.8800 | C12—C13 | 1.3816 (19) |
| N6—H6B | 0.8800 | C12—H12 | 0.9500 |
| C1—C2 | 1.377 (2) | C13—H13 | 0.9500 |
| C1—H1 | 0.9500 | C14—C15 | 1.3963 (19) |
| C2—C3 | 1.388 (2) | C15—C16 | 1.3692 (19) |
| C2—H2 | 0.9500 | C15—H15 | 0.9500 |
| C7—O1—N2 | 108.58 (10) | N3—C7—O1 | 115.87 (13) |
| C16—O2—N5 | 108.34 (10) | N3—C7—C8 | 134.62 (14) |
| C5—N1—C1 | 116.20 (13) | O1—C7—C8 | 109.51 (12) |
| C6—N2—O1 | 104.42 (11) | C7—C8—C6 | 104.48 (12) |
| C7—N3—H3A | 120.0 | C7—C8—H8 | 127.8 |
| C7—N3—H3B | 120.0 | C6—C8—H8 | 127.8 |
| H3A—N3—H3B | 120.0 | N4—C9—C10 | 124.22 (15) |
| C9—N4—C13 | 116.52 (13) | N4—C9—H9 | 117.9 |
| C14—N5—O2 | 104.82 (10) | C10—C9—H9 | 117.9 |
| C16—N6—H6A | 120.0 | C9—C10—C11 | 118.44 (14) |
| C16—N6—H6B | 120.0 | C9—C10—H10 | 120.8 |
| H6A—N6—H6B | 120.0 | C11—C10—H10 | 120.8 |
| N1—C1—C2 | 124.11 (14) | C12—C11—C10 | 118.03 (13) |
| N1—C1—H1 | 117.9 | C12—C11—C14 | 120.03 (13) |
| C2—C1—H1 | 117.9 | C10—C11—C14 | 121.94 (13) |
| C1—C2—C3 | 119.13 (14) | C13—C12—C11 | 119.13 (14) |
| C1—C2—H2 | 120.4 | C13—C12—H12 | 120.4 |
| C3—C2—H2 | 120.4 | C11—C12—H12 | 120.4 |
| C4—C3—C2 | 117.40 (13) | N4—C13—C12 | 123.65 (15) |
| C4—C3—C6 | 120.98 (13) | N4—C13—H13 | 118.2 |
| C2—C3—C6 | 121.60 (13) | C12—C13—H13 | 118.2 |
| C5—C4—C3 | 119.20 (14) | N5—C14—C15 | 112.83 (12) |
| C5—C4—H4 | 120.4 | N5—C14—C11 | 117.08 (12) |
| C3—C4—H4 | 120.4 | C15—C14—C11 | 130.08 (12) |
| N1—C5—C4 | 123.96 (15) | C16—C15—C14 | 104.33 (12) |
| N1—C5—H5 | 118.0 | C16—C15—H15 | 127.8 |
| C4—C5—H5 | 118.0 | C14—C15—H15 | 127.8 |
| N2—C6—C8 | 113.02 (12) | N6—C16—O2 | 115.30 (12) |
| N2—C6—C3 | 118.22 (13) | N6—C16—C15 | 135.03 (14) |
| C8—C6—C3 | 128.72 (13) | O2—C16—C15 | 109.67 (12) |
| H··· | ||||
| N3—H3A···N4 | 0.88 | 2.09 | 2.970 (2) | 177 |
| N3—H3B···N2i | 0.88 | 2.20 | 3.077 (2) | 169 |
| N6—H6A···N1ii | 0.88 | 2.12 | 2.976 (2) | 164 |
| N6—H6B···N5iii | 0.88 | 2.09 | 2.970 (2) | 174 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N3—H3 | 0.88 | 2.09 | 2.970 (2) | 177 |
| N3—H3 | 0.88 | 2.20 | 3.077 (2) | 169 |
| N6—H6 | 0.88 | 2.12 | 2.976 (2) | 164 |
| N6—H6 | 0.88 | 2.09 | 2.970 (2) | 174 |
Symmetry codes: (i) ; (ii) ; (iii) .