| Literature DB >> 21200690 |
Hai-Yan Liu, Guo-Hua Wei, Jian-Fang Ma.
Abstract
The title compound, C(28)H(52)N(6) (6+)·6Cl(-)·4H(2)O, is a dinucleating 28-membered centrosymmetric hexa-azamacrocyclic complex. The macrocyclic ligand adopts a chair-like conformation, with the crystallographic inversion center located in the macrocyclic cavity. The sixEntities:
Year: 2007 PMID: 21200690 PMCID: PMC2915196 DOI: 10.1107/S1600536807063064
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C28H52N66+·6Cl–·4H2O | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 4594 reflections |
| θ = 3.0–27.5º | |
| µ = 0.46 mm−1 | |
| β = 113.841 (13)º | Block, colourless |
| 0.19 × 0.18 × 0.15 mm | |
| Rigaku R-AXIS RAPID diffractometer | 4594 independent reflections |
| Radiation source: fine-focus sealed tube | 2416 reflections with |
| Monochromator: graphite | |
| Detector resolution: 10.0 pixels mm-1 | θmax = 27.5º |
| θmin = 3.0º | |
| ω scans | |
| Absorption correction: multi-scan(Higashi, 1995) | |
| 18546 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H atoms treated by a mixture of independent and constrained refinement | |
| | |
| (Δ/σ)max = 0.001 | |
| 4594 reflections | Δρmax = 0.24 e Å−3 |
| 235 parameters | Δρmin = −0.26 e Å−3 |
| 8 restraints | Extinction correction: none |
| Primary atom site location: structure-invariant direct methods |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| C1 | 0.82877 (18) | 0.1791 (4) | 0.39938 (18) | 0.0355 (7) | |
| C2 | 0.84179 (18) | 0.0147 (4) | 0.44031 (19) | 0.0368 (7) | |
| H2 | 0.8105 | −0.0843 | 0.4115 | 0.044* | |
| C3 | 0.90031 (19) | −0.0047 (4) | 0.52305 (19) | 0.0350 (7) | |
| C4 | 0.94848 (19) | 0.1433 (4) | 0.5644 (2) | 0.0400 (8) | |
| H4 | 0.9890 | 0.1320 | 0.6196 | 0.048* | |
| C5 | 0.9369 (2) | 0.3061 (4) | 0.5244 (2) | 0.0450 (8) | |
| H5 | 0.9693 | 0.4044 | 0.5528 | 0.054* | |
| C6 | 0.8769 (2) | 0.3245 (4) | 0.4419 (2) | 0.0420 (8) | |
| H6 | 0.8692 | 0.4351 | 0.4151 | 0.050* | |
| C7 | 0.76289 (18) | 0.1935 (5) | 0.30992 (19) | 0.0431 (8) | |
| H7A | 0.7856 | 0.2686 | 0.2781 | 0.052* | |
| H7B | 0.7527 | 0.0754 | 0.2845 | 0.052* | |
| C8 | 0.63910 (18) | 0.1810 (4) | 0.35545 (18) | 0.0367 (7) | |
| H8A | 0.6756 | 0.1954 | 0.4149 | 0.044* | |
| H8B | 0.6329 | 0.0539 | 0.3428 | 0.044* | |
| C9 | 0.55173 (19) | 0.2631 (4) | 0.33619 (19) | 0.0395 (8) | |
| H9A | 0.5580 | 0.3911 | 0.3465 | 0.047* | |
| H9B | 0.5149 | 0.2447 | 0.2771 | 0.047* | |
| C10 | 0.51067 (18) | 0.1803 (4) | 0.39031 (19) | 0.0385 (7) | |
| H10A | 0.5066 | 0.0517 | 0.3820 | 0.046* | |
| H10B | 0.5460 | 0.2037 | 0.4493 | 0.046* | |
| C11 | 0.37784 (18) | 0.1881 (4) | 0.41939 (19) | 0.0411 (8) | |
| H11A | 0.4035 | 0.2392 | 0.4756 | 0.049* | |
| H11B | 0.3838 | 0.0590 | 0.4245 | 0.049* | |
| C12 | 0.28364 (19) | 0.2373 (4) | 0.3786 (2) | 0.0435 (8) | |
| H12A | 0.2782 | 0.3645 | 0.3663 | 0.052* | |
| H12B | 0.2566 | 0.1734 | 0.3256 | 0.052* | |
| C13 | 0.23772 (18) | 0.1922 (4) | 0.4348 (2) | 0.0412 (8) | |
| H13A | 0.2536 | 0.0728 | 0.4577 | 0.049* | |
| H13B | 0.2544 | 0.2762 | 0.4814 | 0.049* | |
| C14 | 0.08870 (19) | 0.1827 (4) | 0.4337 (2) | 0.0434 (8) | |
| H14A | 0.0289 | 0.1977 | 0.3957 | 0.052* | |
| H14B | 0.1033 | 0.2769 | 0.4757 | 0.052* | |
| N1 | 0.67900 (17) | 0.2703 (4) | 0.30374 (17) | 0.0345 (6) | |
| H1A | 0.683 (2) | 0.3817 (17) | 0.3174 (19) | 0.049 (10)* | |
| H1B | 0.6425 (19) | 0.256 (4) | 0.2505 (19) | 0.037 (8)* | |
| N2 | 0.42311 (16) | 0.2566 (4) | 0.36763 (17) | 0.0341 (6) | |
| H2A | 0.4253 (18) | 0.375 (4) | 0.3706 (18) | 0.038 (9)* | |
| H2B | 0.391 (2) | 0.238 (4) | 0.309 (2) | 0.052 (10)* | |
| N3 | 0.14354 (16) | 0.2017 (4) | 0.38479 (18) | 0.0385 (6) | |
| H3A | 0.129 (2) | 0.303 (2) | 0.3601 (18) | 0.053 (11)* | |
| H3B | 0.130 (2) | 0.120 (3) | 0.3470 (14) | 0.046 (10)* | |
| O1W | 0.2694 (2) | 0.7467 (6) | 0.4322 (2) | 0.1099 (12) | |
| H1O | 0.226 (2) | 0.690 (7) | 0.400 (3) | 0.165* | |
| H2O | 0.307 (2) | 0.711 (8) | 0.416 (4) | 0.165* | |
| O2W | 0.09052 (17) | −0.0279 (3) | 0.24667 (18) | 0.0595 (7) | |
| H3O | 0.090 (3) | −0.1386 (18) | 0.256 (3) | 0.089* | |
| H4O | 0.0390 (11) | 0.005 (5) | 0.232 (3) | 0.089* | |
| Cl1 | 0.43151 (6) | 0.67844 (11) | 0.38468 (5) | 0.0500 (2) | |
| Cl2 | 0.68078 (6) | 0.68054 (11) | 0.32358 (5) | 0.0545 (3) | |
| Cl3 | 0.10025 (6) | 0.55940 (11) | 0.28508 (6) | 0.0543 (3) |
| C1 | 0.0243 (15) | 0.0496 (19) | 0.0374 (16) | 0.0022 (15) | 0.0175 (13) | 0.0018 (15) |
| C2 | 0.0258 (15) | 0.0446 (18) | 0.0432 (17) | −0.0034 (13) | 0.0172 (14) | −0.0063 (15) |
| C3 | 0.0252 (15) | 0.0397 (17) | 0.0454 (18) | 0.0035 (13) | 0.0197 (14) | 0.0033 (15) |
| C4 | 0.0295 (16) | 0.054 (2) | 0.0393 (17) | −0.0024 (15) | 0.0172 (14) | 0.0001 (16) |
| C5 | 0.0406 (19) | 0.0457 (19) | 0.0478 (19) | −0.0110 (15) | 0.0169 (16) | −0.0032 (16) |
| C6 | 0.0391 (18) | 0.0430 (18) | 0.0475 (19) | −0.0013 (15) | 0.0213 (15) | 0.0061 (16) |
| C7 | 0.0331 (17) | 0.064 (2) | 0.0373 (17) | 0.0027 (16) | 0.0192 (14) | −0.0028 (16) |
| C8 | 0.0329 (16) | 0.0444 (17) | 0.0362 (16) | 0.0022 (14) | 0.0174 (14) | 0.0044 (14) |
| C9 | 0.0350 (17) | 0.0436 (17) | 0.0449 (18) | 0.0044 (14) | 0.0210 (15) | 0.0038 (15) |
| C10 | 0.0293 (16) | 0.0456 (18) | 0.0400 (17) | 0.0042 (14) | 0.0133 (14) | 0.0056 (15) |
| C11 | 0.0302 (16) | 0.0512 (19) | 0.0434 (18) | −0.0002 (15) | 0.0165 (14) | 0.0063 (16) |
| C12 | 0.0327 (17) | 0.053 (2) | 0.0496 (19) | 0.0028 (15) | 0.0213 (15) | 0.0107 (16) |
| C13 | 0.0279 (16) | 0.054 (2) | 0.0423 (17) | −0.0007 (15) | 0.0151 (14) | 0.0043 (16) |
| C14 | 0.0343 (17) | 0.0475 (19) | 0.057 (2) | 0.0081 (15) | 0.0279 (16) | 0.0075 (16) |
| N1 | 0.0321 (14) | 0.0430 (17) | 0.0290 (14) | −0.0003 (13) | 0.0130 (12) | −0.0010 (13) |
| N2 | 0.0267 (14) | 0.0355 (15) | 0.0413 (16) | −0.0016 (12) | 0.0152 (12) | −0.0004 (13) |
| N3 | 0.0328 (14) | 0.0379 (16) | 0.0460 (16) | 0.0016 (13) | 0.0170 (13) | 0.0068 (15) |
| O1W | 0.077 (2) | 0.147 (3) | 0.101 (3) | −0.015 (2) | 0.031 (2) | −0.065 (2) |
| O2W | 0.0507 (16) | 0.0587 (15) | 0.0750 (17) | −0.0019 (14) | 0.0317 (15) | −0.0071 (15) |
| Cl1 | 0.0533 (5) | 0.0491 (5) | 0.0392 (4) | −0.0022 (4) | 0.0098 (4) | −0.0021 (4) |
| Cl2 | 0.0599 (6) | 0.0452 (5) | 0.0469 (5) | −0.0075 (4) | 0.0096 (4) | −0.0035 (4) |
| Cl3 | 0.0492 (5) | 0.0495 (5) | 0.0622 (6) | −0.0017 (4) | 0.0206 (4) | 0.0085 (4) |
| C1—C6 | 1.380 (4) | C11—N2 | 1.489 (4) |
| C1—C2 | 1.391 (4) | C11—C12 | 1.512 (4) |
| C1—C7 | 1.505 (4) | C11—H11A | 0.97 |
| C2—C3 | 1.383 (4) | C11—H11B | 0.97 |
| C2—H2 | 0.93 | C12—C13 | 1.512 (4) |
| C3—C4 | 1.390 (4) | C12—H12A | 0.97 |
| C3—C14i | 1.500 (4) | C12—H12B | 0.97 |
| C4—C5 | 1.374 (4) | C13—N3 | 1.483 (4) |
| C4—H4 | 0.93 | C13—H13A | 0.97 |
| C5—C6 | 1.387 (4) | C13—H13B | 0.97 |
| C5—H5 | 0.93 | C14—N3 | 1.500 (4) |
| C6—H6 | 0.93 | C14—C3i | 1.500 (4) |
| C7—N1 | 1.501 (4) | C14—H14A | 0.97 |
| C7—H7A | 0.97 | C14—H14B | 0.97 |
| C7—H7B | 0.97 | N1—H1A | 0.861 (10) |
| C8—N1 | 1.483 (4) | N1—H1B | 0.89 (3) |
| C8—C9 | 1.515 (4) | N2—H2A | 0.89 (3) |
| C8—H8A | 0.97 | N2—H2B | 0.95 (3) |
| C8—H8B | 0.97 | N3—H3A | 0.857 (10) |
| C9—C10 | 1.510 (4) | N3—H3B | 0.857 (10) |
| C9—H9A | 0.97 | O1W—H1O | 0.84 (4) |
| C9—H9B | 0.97 | O1W—H2O | 0.84 (5) |
| C10—N2 | 1.492 (4) | O2W—H3O | 0.841 (10) |
| C10—H10A | 0.97 | O2W—H4O | 0.84 (3) |
| C10—H10B | 0.97 | ||
| C6—C1—C2 | 119.0 (3) | N2—C11—H11A | 109.7 |
| C6—C1—C7 | 121.9 (3) | C12—C11—H11A | 109.7 |
| C2—C1—C7 | 119.1 (3) | N2—C11—H11B | 109.7 |
| C3—C2—C1 | 121.4 (3) | C12—C11—H11B | 109.7 |
| C3—C2—H2 | 119.3 | H11A—C11—H11B | 108.2 |
| C1—C2—H2 | 119.3 | C13—C12—C11 | 111.7 (3) |
| C2—C3—C4 | 118.6 (3) | C13—C12—H12A | 109.3 |
| C2—C3—C14i | 120.1 (3) | C11—C12—H12A | 109.3 |
| C4—C3—C14i | 121.3 (3) | C13—C12—H12B | 109.3 |
| C5—C4—C3 | 120.7 (3) | C11—C12—H12B | 109.3 |
| C5—C4—H4 | 119.7 | H12A—C12—H12B | 107.9 |
| C3—C4—H4 | 119.7 | N3—C13—C12 | 109.3 (3) |
| C4—C5—C6 | 120.2 (3) | N3—C13—H13A | 109.8 |
| C4—C5—H5 | 119.9 | C12—C13—H13A | 109.8 |
| C6—C5—H5 | 119.9 | N3—C13—H13B | 109.8 |
| C1—C6—C5 | 120.2 (3) | C12—C13—H13B | 109.8 |
| C1—C6—H6 | 119.9 | H13A—C13—H13B | 108.3 |
| C5—C6—H6 | 119.9 | N3—C14—C3i | 112.7 (2) |
| N1—C7—C1 | 113.0 (2) | N3—C14—H14A | 109.1 |
| N1—C7—H7A | 109.0 | C3i—C14—H14A | 109.1 |
| C1—C7—H7A | 109.0 | N3—C14—H14B | 109.1 |
| N1—C7—H7B | 109.0 | C3i—C14—H14B | 109.1 |
| C1—C7—H7B | 109.0 | H14A—C14—H14B | 107.8 |
| H7A—C7—H7B | 107.8 | C8—N1—C7 | 116.1 (2) |
| N1—C8—C9 | 109.4 (2) | C8—N1—H1A | 106 (2) |
| N1—C8—H8A | 109.8 | C7—N1—H1A | 112 (2) |
| C9—C8—H8A | 109.8 | C8—N1—H1B | 106 (2) |
| N1—C8—H8B | 109.8 | C7—N1—H1B | 106 (2) |
| C9—C8—H8B | 109.8 | H1A—N1—H1B | 110 (3) |
| H8A—C8—H8B | 108.2 | C11—N2—C10 | 114.5 (2) |
| C10—C9—C8 | 110.9 (2) | C11—N2—H2A | 109 (2) |
| C10—C9—H9A | 109.5 | C10—N2—H2A | 110.6 (19) |
| C8—C9—H9A | 109.5 | C11—N2—H2B | 112 (2) |
| C10—C9—H9B | 109.5 | C10—N2—H2B | 108 (2) |
| C8—C9—H9B | 109.5 | H2A—N2—H2B | 102 (3) |
| H9A—C9—H9B | 108.1 | C13—N3—C14 | 115.9 (3) |
| N2—C10—C9 | 110.1 (2) | C13—N3—H3A | 111 (2) |
| N2—C10—H10A | 109.6 | C14—N3—H3A | 104 (2) |
| C9—C10—H10A | 109.6 | C13—N3—H3B | 108 (2) |
| N2—C10—H10B | 109.6 | C14—N3—H3B | 109 (2) |
| C9—C10—H10B | 109.6 | H3A—N3—H3B | 108 (3) |
| H10A—C10—H10B | 108.2 | H1O—O1W—H2O | 102 (5) |
| N2—C11—C12 | 110.0 (2) | H3O—O2W—H4O | 105 (4) |
| C6—C1—C2—C3 | 1.6 (5) | C2—C1—C7—N1 | 99.6 (3) |
| C7—C1—C2—C3 | −178.7 (3) | N1—C8—C9—C10 | −177.8 (3) |
| C1—C2—C3—C4 | −2.0 (5) | C8—C9—C10—N2 | −177.3 (2) |
| C1—C2—C3—C14i | 178.4 (3) | N2—C11—C12—C13 | −172.3 (3) |
| C2—C3—C4—C5 | 1.4 (5) | C11—C12—C13—N3 | −166.5 (3) |
| C14i—C3—C4—C5 | −179.1 (3) | C9—C8—N1—C7 | −174.9 (2) |
| C3—C4—C5—C6 | −0.3 (5) | C1—C7—N1—C8 | −53.3 (4) |
| C2—C1—C6—C5 | −0.5 (5) | C12—C11—N2—C10 | −166.3 (3) |
| C7—C1—C6—C5 | 179.8 (3) | C9—C10—N2—C11 | −178.1 (3) |
| C4—C5—C6—C1 | −0.2 (5) | C12—C13—N3—C14 | −172.8 (3) |
| C6—C1—C7—N1 | −80.7 (4) | C3i—C14—N3—C13 | −62.0 (4) |
| H··· | ||||
| N1—H1A···Cl2 | 0.86 (2) | 2.24 (1) | 3.082 (3) | 168 (3) |
| N1—H1B···Cl1ii | 0.89 (3) | 2.24 (3) | 3.115 (3) | 169 (3) |
| O1W—H1O···Cl3 | 0.84 (4) | 2.46 (5) | 3.287 (4) | 169 (4) |
| N2—H2A···Cl1 | 0.89 (3) | 2.28 (3) | 3.162 (3) | 177 (3) |
| N2—H2B···Cl2ii | 0.95 (3) | 2.17 (3) | 3.113 (3) | 177 (3) |
| O1W—H2O···Cl1 | 0.84 (5) | 2.40 (5) | 3.222 (4) | 166 (5) |
| N3—H3A···Cl3 | 0.85 (2) | 2.25 (2) | 3.104 (3) | 173 (3) |
| N3—H3B···O2W | 0.86 (2) | 1.94 (2) | 2.782 (4) | 169 (2) |
| O2W—H3O···Cl3iii | 0.84 (2) | 2.30 (2) | 3.144 (3) | 176 (6) |
| O2W—H4O···Cl3iv | 0.84 (3) | 2.30 (3) | 3.133 (4) | 168 (4) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N1—H1 | 0.86 (2) | 2.24 (1) | 3.082 (3) | 168 (3) |
| N1—H1 | 0.89 (3) | 2.24 (3) | 3.115 (3) | 169 (3) |
| O1 | 0.84 (4) | 2.46 (5) | 3.287 (4) | 169 (4) |
| N2—H2 | 0.89 (3) | 2.28 (3) | 3.162 (3) | 177 (3) |
| N2—H2 | 0.95 (3) | 2.17 (3) | 3.113 (3) | 177 (3) |
| O1 | 0.84 (5) | 2.40 (5) | 3.222 (4) | 166 (5) |
| N3—H3 | 0.85 (2) | 2.25 (2) | 3.104 (3) | 173 (3) |
| N3—H3 | 0.86 (2) | 1.94 (2) | 2.782 (4) | 169 (2) |
| O2 | 0.84 (2) | 2.30 (2) | 3.144 (3) | 176 (6) |
| O2 | 0.84 (3) | 2.30 (3) | 3.133 (4) | 168 (4) |
Symmetry codes: (i) ; (ii) ; (iii) .