| Literature DB >> 21200690 |
Hai-Yan Liu, Guo-Hua Wei, Jian-Fang Ma.
Abstract
The title compound, C(28)H(52)N(6) (6+)·6Cl(-)·4H(2)O, is a dinucleating 28-membered centrosymmetricEntities:
Year: 2007 PMID: 21200690 PMCID: PMC2915196 DOI: 10.1107/S1600536807063064
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C28H52N66+·6Cl–·4H2O | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 4594 reflections |
| θ = 3.0–27.5º | |
| µ = 0.46 mm−1 | |
| β = 113.841 (13)º | Block, colourless |
| 0.19 × 0.18 × 0.15 mm | |
| Rigaku R-AXIS RAPID diffractometer | 4594 independent reflections |
| Radiation source: fine-focus sealed tube | 2416 reflections with |
| Monochromator: graphite | |
| Detector resolution: 10.0 pixels mm-1 | θmax = 27.5º |
| θmin = 3.0º | |
| ω scans | |
| Absorption correction: multi-scan(Higashi, 1995) | |
| 18546 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H atoms treated by a mixture of independent and constrained refinement | |
| | |
| (Δ/σ)max = 0.001 | |
| 4594 reflections | Δρmax = 0.24 e Å−3 |
| 235 parameters | Δρmin = −0.26 e Å−3 |
| 8 restraints | Extinction correction: none |
| Primary atom site location: structure-invariant direct methods |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| C1 | 0.82877 (18) | 0.1791 (4) | 0.39938 (18) | 0.0355 (7) | |
| C2 | 0.84179 (18) | 0.0147 (4) | 0.44031 (19) | 0.0368 (7) | |
| H2 | 0.8105 | −0.0843 | 0.4115 | 0.044* | |
| C3 | 0.90031 (19) | −0.0047 (4) | 0.52305 (19) | 0.0350 (7) | |
| C4 | 0.94848 (19) | 0.1433 (4) | 0.5644 (2) | 0.0400 (8) | |
| H4 | 0.9890 | 0.1320 | 0.6196 | 0.048* | |
| C5 | 0.9369 (2) | 0.3061 (4) | 0.5244 (2) | 0.0450 (8) | |
| H5 | 0.9693 | 0.4044 | 0.5528 | 0.054* | |
| C6 | 0.8769 (2) | 0.3245 (4) | 0.4419 (2) | 0.0420 (8) | |
| H6 | 0.8692 | 0.4351 | 0.4151 | 0.050* | |
| C7 | 0.76289 (18) | 0.1935 (5) | 0.30992 (19) | 0.0431 (8) | |
| H7A | 0.7856 | 0.2686 | 0.2781 | 0.052* | |
| H7B | 0.7527 | 0.0754 | 0.2845 | 0.052* | |
| C8 | 0.63910 (18) | 0.1810 (4) | 0.35545 (18) | 0.0367 (7) | |
| H8A | 0.6756 | 0.1954 | 0.4149 | 0.044* | |
| H8B | 0.6329 | 0.0539 | 0.3428 | 0.044* | |
| C9 | 0.55173 (19) | 0.2631 (4) | 0.33619 (19) | 0.0395 (8) | |
| H9A | 0.5580 | 0.3911 | 0.3465 | 0.047* | |
| H9B | 0.5149 | 0.2447 | 0.2771 | 0.047* | |
| C10 | 0.51067 (18) | 0.1803 (4) | 0.39031 (19) | 0.0385 (7) | |
| H10A | 0.5066 | 0.0517 | 0.3820 | 0.046* | |
| H10B | 0.5460 | 0.2037 | 0.4493 | 0.046* | |
| C11 | 0.37784 (18) | 0.1881 (4) | 0.41939 (19) | 0.0411 (8) | |
| H11A | 0.4035 | 0.2392 | 0.4756 | 0.049* | |
| H11B | 0.3838 | 0.0590 | 0.4245 | 0.049* | |
| C12 | 0.28364 (19) | 0.2373 (4) | 0.3786 (2) | 0.0435 (8) | |
| H12A | 0.2782 | 0.3645 | 0.3663 | 0.052* | |
| H12B | 0.2566 | 0.1734 | 0.3256 | 0.052* | |
| C13 | 0.23772 (18) | 0.1922 (4) | 0.4348 (2) | 0.0412 (8) | |
| H13A | 0.2536 | 0.0728 | 0.4577 | 0.049* | |
| H13B | 0.2544 | 0.2762 | 0.4814 | 0.049* | |
| C14 | 0.08870 (19) | 0.1827 (4) | 0.4337 (2) | 0.0434 (8) | |
| H14A | 0.0289 | 0.1977 | 0.3957 | 0.052* | |
| H14B | 0.1033 | 0.2769 | 0.4757 | 0.052* | |
| N1 | 0.67900 (17) | 0.2703 (4) | 0.30374 (17) | 0.0345 (6) | |
| H1A | 0.683 (2) | 0.3817 (17) | 0.3174 (19) | 0.049 (10)* | |
| H1B | 0.6425 (19) | 0.256 (4) | 0.2505 (19) | 0.037 (8)* | |
| N2 | 0.42311 (16) | 0.2566 (4) | 0.36763 (17) | 0.0341 (6) | |
| H2A | 0.4253 (18) | 0.375 (4) | 0.3706 (18) | 0.038 (9)* | |
| H2B | 0.391 (2) | 0.238 (4) | 0.309 (2) | 0.052 (10)* | |
| N3 | 0.14354 (16) | 0.2017 (4) | 0.38479 (18) | 0.0385 (6) | |
| H3A | 0.129 (2) | 0.303 (2) | 0.3601 (18) | 0.053 (11)* | |
| H3B | 0.130 (2) | 0.120 (3) | 0.3470 (14) | 0.046 (10)* | |
| O1W | 0.2694 (2) | 0.7467 (6) | 0.4322 (2) | 0.1099 (12) | |
| H1O | 0.226 (2) | 0.690 (7) | 0.400 (3) | 0.165* | |
| H2O | 0.307 (2) | 0.711 (8) | 0.416 (4) | 0.165* | |
| O2W | 0.09052 (17) | −0.0279 (3) | 0.24667 (18) | 0.0595 (7) | |
| H3O | 0.090 (3) | −0.1386 (18) | 0.256 (3) | 0.089* | |
| H4O | 0.0390 (11) | 0.005 (5) | 0.232 (3) | 0.089* | |
| Cl1 | 0.43151 (6) | 0.67844 (11) | 0.38468 (5) | 0.0500 (2) | |
| Cl2 | 0.68078 (6) | 0.68054 (11) | 0.32358 (5) | 0.0545 (3) | |
| Cl3 | 0.10025 (6) | 0.55940 (11) | 0.28508 (6) | 0.0543 (3) |
| C1 | 0.0243 (15) | 0.0496 (19) | 0.0374 (16) | 0.0022 (15) | 0.0175 (13) | 0.0018 (15) |
| C2 | 0.0258 (15) | 0.0446 (18) | 0.0432 (17) | −0.0034 (13) | 0.0172 (14) | −0.0063 (15) |
| C3 | 0.0252 (15) | 0.0397 (17) | 0.0454 (18) | 0.0035 (13) | 0.0197 (14) | 0.0033 (15) |
| C4 | 0.0295 (16) | 0.054 (2) | 0.0393 (17) | −0.0024 (15) | 0.0172 (14) | 0.0001 (16) |
| C5 | 0.0406 (19) | 0.0457 (19) | 0.0478 (19) | −0.0110 (15) | 0.0169 (16) | −0.0032 (16) |
| C6 | 0.0391 (18) | 0.0430 (18) | 0.0475 (19) | −0.0013 (15) | 0.0213 (15) | 0.0061 (16) |
| C7 | 0.0331 (17) | 0.064 (2) | 0.0373 (17) | 0.0027 (16) | 0.0192 (14) | −0.0028 (16) |
| C8 | 0.0329 (16) | 0.0444 (17) | 0.0362 (16) | 0.0022 (14) | 0.0174 (14) | 0.0044 (14) |
| C9 | 0.0350 (17) | 0.0436 (17) | 0.0449 (18) | 0.0044 (14) | 0.0210 (15) | 0.0038 (15) |
| C10 | 0.0293 (16) | 0.0456 (18) | 0.0400 (17) | 0.0042 (14) | 0.0133 (14) | 0.0056 (15) |
| C11 | 0.0302 (16) | 0.0512 (19) | 0.0434 (18) | −0.0002 (15) | 0.0165 (14) | 0.0063 (16) |
| C12 | 0.0327 (17) | 0.053 (2) | 0.0496 (19) | 0.0028 (15) | 0.0213 (15) | 0.0107 (16) |
| C13 | 0.0279 (16) | 0.054 (2) | 0.0423 (17) | −0.0007 (15) | 0.0151 (14) | 0.0043 (16) |
| C14 | 0.0343 (17) | 0.0475 (19) | 0.057 (2) | 0.0081 (15) | 0.0279 (16) | 0.0075 (16) |
| N1 | 0.0321 (14) | 0.0430 (17) | 0.0290 (14) | −0.0003 (13) | 0.0130 (12) | −0.0010 (13) |
| N2 | 0.0267 (14) | 0.0355 (15) | 0.0413 (16) | −0.0016 (12) | 0.0152 (12) | −0.0004 (13) |
| N3 | 0.0328 (14) | 0.0379 (16) | 0.0460 (16) | 0.0016 (13) | 0.0170 (13) | 0.0068 (15) |
| O1W | 0.077 (2) | 0.147 (3) | 0.101 (3) | −0.015 (2) | 0.031 (2) | −0.065 (2) |
| O2W | 0.0507 (16) | 0.0587 (15) | 0.0750 (17) | −0.0019 (14) | 0.0317 (15) | −0.0071 (15) |
| Cl1 | 0.0533 (5) | 0.0491 (5) | 0.0392 (4) | −0.0022 (4) | 0.0098 (4) | −0.0021 (4) |
| Cl2 | 0.0599 (6) | 0.0452 (5) | 0.0469 (5) | −0.0075 (4) | 0.0096 (4) | −0.0035 (4) |
| Cl3 | 0.0492 (5) | 0.0495 (5) | 0.0622 (6) | −0.0017 (4) | 0.0206 (4) | 0.0085 (4) |
| C1—C6 | 1.380 (4) | C11—N2 | 1.489 (4) |
| C1—C2 | 1.391 (4) | C11—C12 | 1.512 (4) |
| C1—C7 | 1.505 (4) | C11—H11A | 0.97 |
| C2—C3 | 1.383 (4) | C11—H11B | 0.97 |
| C2—H2 | 0.93 | C12—C13 | 1.512 (4) |
| C3—C4 | 1.390 (4) | C12—H12A | 0.97 |
| C3—C14i | 1.500 (4) | C12—H12B | 0.97 |
| C4—C5 | 1.374 (4) | C13—N3 | 1.483 (4) |
| C4—H4 | 0.93 | C13—H13A | 0.97 |
| C5—C6 | 1.387 (4) | C13—H13B | 0.97 |
| C5—H5 | 0.93 | C14—N3 | 1.500 (4) |
| C6—H6 | 0.93 | C14—C3i | 1.500 (4) |
| C7—N1 | 1.501 (4) | C14—H14A | 0.97 |
| C7—H7A | 0.97 | C14—H14B | 0.97 |
| C7—H7B | 0.97 | N1—H1A | 0.861 (10) |
| C8—N1 | 1.483 (4) | N1—H1B | 0.89 (3) |
| C8—C9 | 1.515 (4) | N2—H2A | 0.89 (3) |
| C8—H8A | 0.97 | N2—H2B | 0.95 (3) |
| C8—H8B | 0.97 | N3—H3A | 0.857 (10) |
| C9—C10 | 1.510 (4) | N3—H3B | 0.857 (10) |
| C9—H9A | 0.97 | O1W—H1O | 0.84 (4) |
| C9—H9B | 0.97 | O1W—H2O | 0.84 (5) |
| C10—N2 | 1.492 (4) | O2W—H3O | 0.841 (10) |
| C10—H10A | 0.97 | O2W—H4O | 0.84 (3) |
| C10—H10B | 0.97 | ||
| C6—C1—C2 | 119.0 (3) | N2—C11—H11A | 109.7 |
| C6—C1—C7 | 121.9 (3) | C12—C11—H11A | 109.7 |
| C2—C1—C7 | 119.1 (3) | N2—C11—H11B | 109.7 |
| C3—C2—C1 | 121.4 (3) | C12—C11—H11B | 109.7 |
| C3—C2—H2 | 119.3 | H11A—C11—H11B | 108.2 |
| C1—C2—H2 | 119.3 | C13—C12—C11 | 111.7 (3) |
| C2—C3—C4 | 118.6 (3) | C13—C12—H12A | 109.3 |
| C2—C3—C14i | 120.1 (3) | C11—C12—H12A | 109.3 |
| C4—C3—C14i | 121.3 (3) | C13—C12—H12B | 109.3 |
| C5—C4—C3 | 120.7 (3) | C11—C12—H12B | 109.3 |
| C5—C4—H4 | 119.7 | H12A—C12—H12B | 107.9 |
| C3—C4—H4 | 119.7 | N3—C13—C12 | 109.3 (3) |
| C4—C5—C6 | 120.2 (3) | N3—C13—H13A | 109.8 |
| C4—C5—H5 | 119.9 | C12—C13—H13A | 109.8 |
| C6—C5—H5 | 119.9 | N3—C13—H13B | 109.8 |
| C1—C6—C5 | 120.2 (3) | C12—C13—H13B | 109.8 |
| C1—C6—H6 | 119.9 | H13A—C13—H13B | 108.3 |
| C5—C6—H6 | 119.9 | N3—C14—C3i | 112.7 (2) |
| N1—C7—C1 | 113.0 (2) | N3—C14—H14A | 109.1 |
| N1—C7—H7A | 109.0 | C3i—C14—H14A | 109.1 |
| C1—C7—H7A | 109.0 | N3—C14—H14B | 109.1 |
| N1—C7—H7B | 109.0 | C3i—C14—H14B | 109.1 |
| C1—C7—H7B | 109.0 | H14A—C14—H14B | 107.8 |
| H7A—C7—H7B | 107.8 | C8—N1—C7 | 116.1 (2) |
| N1—C8—C9 | 109.4 (2) | C8—N1—H1A | 106 (2) |
| N1—C8—H8A | 109.8 | C7—N1—H1A | 112 (2) |
| C9—C8—H8A | 109.8 | C8—N1—H1B | 106 (2) |
| N1—C8—H8B | 109.8 | C7—N1—H1B | 106 (2) |
| C9—C8—H8B | 109.8 | H1A—N1—H1B | 110 (3) |
| H8A—C8—H8B | 108.2 | C11—N2—C10 | 114.5 (2) |
| C10—C9—C8 | 110.9 (2) | C11—N2—H2A | 109 (2) |
| C10—C9—H9A | 109.5 | C10—N2—H2A | 110.6 (19) |
| C8—C9—H9A | 109.5 | C11—N2—H2B | 112 (2) |
| C10—C9—H9B | 109.5 | C10—N2—H2B | 108 (2) |
| C8—C9—H9B | 109.5 | H2A—N2—H2B | 102 (3) |
| H9A—C9—H9B | 108.1 | C13—N3—C14 | 115.9 (3) |
| N2—C10—C9 | 110.1 (2) | C13—N3—H3A | 111 (2) |
| N2—C10—H10A | 109.6 | C14—N3—H3A | 104 (2) |
| C9—C10—H10A | 109.6 | C13—N3—H3B | 108 (2) |
| N2—C10—H10B | 109.6 | C14—N3—H3B | 109 (2) |
| C9—C10—H10B | 109.6 | H3A—N3—H3B | 108 (3) |
| H10A—C10—H10B | 108.2 | H1O—O1W—H2O | 102 (5) |
| N2—C11—C12 | 110.0 (2) | H3O—O2W—H4O | 105 (4) |
| C6—C1—C2—C3 | 1.6 (5) | C2—C1—C7—N1 | 99.6 (3) |
| C7—C1—C2—C3 | −178.7 (3) | N1—C8—C9—C10 | −177.8 (3) |
| C1—C2—C3—C4 | −2.0 (5) | C8—C9—C10—N2 | −177.3 (2) |
| C1—C2—C3—C14i | 178.4 (3) | N2—C11—C12—C13 | −172.3 (3) |
| C2—C3—C4—C5 | 1.4 (5) | C11—C12—C13—N3 | −166.5 (3) |
| C14i—C3—C4—C5 | −179.1 (3) | C9—C8—N1—C7 | −174.9 (2) |
| C3—C4—C5—C6 | −0.3 (5) | C1—C7—N1—C8 | −53.3 (4) |
| C2—C1—C6—C5 | −0.5 (5) | C12—C11—N2—C10 | −166.3 (3) |
| C7—C1—C6—C5 | 179.8 (3) | C9—C10—N2—C11 | −178.1 (3) |
| C4—C5—C6—C1 | −0.2 (5) | C12—C13—N3—C14 | −172.8 (3) |
| C6—C1—C7—N1 | −80.7 (4) | C3i—C14—N3—C13 | −62.0 (4) |
| H··· | ||||
| N1—H1A···Cl2 | 0.86 (2) | 2.24 (1) | 3.082 (3) | 168 (3) |
| N1—H1B···Cl1ii | 0.89 (3) | 2.24 (3) | 3.115 (3) | 169 (3) |
| O1W—H1O···Cl3 | 0.84 (4) | 2.46 (5) | 3.287 (4) | 169 (4) |
| N2—H2A···Cl1 | 0.89 (3) | 2.28 (3) | 3.162 (3) | 177 (3) |
| N2—H2B···Cl2ii | 0.95 (3) | 2.17 (3) | 3.113 (3) | 177 (3) |
| O1W—H2O···Cl1 | 0.84 (5) | 2.40 (5) | 3.222 (4) | 166 (5) |
| N3—H3A···Cl3 | 0.85 (2) | 2.25 (2) | 3.104 (3) | 173 (3) |
| N3—H3B···O2W | 0.86 (2) | 1.94 (2) | 2.782 (4) | 169 (2) |
| O2W—H3O···Cl3iii | 0.84 (2) | 2.30 (2) | 3.144 (3) | 176 (6) |
| O2W—H4O···Cl3iv | 0.84 (3) | 2.30 (3) | 3.133 (4) | 168 (4) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N1—H1 | 0.86 (2) | 2.24 (1) | 3.082 (3) | 168 (3) |
| N1—H1 | 0.89 (3) | 2.24 (3) | 3.115 (3) | 169 (3) |
| O1 | 0.84 (4) | 2.46 (5) | 3.287 (4) | 169 (4) |
| N2—H2 | 0.89 (3) | 2.28 (3) | 3.162 (3) | 177 (3) |
| N2—H2 | 0.95 (3) | 2.17 (3) | 3.113 (3) | 177 (3) |
| O1 | 0.84 (5) | 2.40 (5) | 3.222 (4) | 166 (5) |
| N3—H3 | 0.85 (2) | 2.25 (2) | 3.104 (3) | 173 (3) |
| N3—H3 | 0.86 (2) | 1.94 (2) | 2.782 (4) | 169 (2) |
| O2 | 0.84 (2) | 2.30 (2) | 3.144 (3) | 176 (6) |
| O2 | 0.84 (3) | 2.30 (3) | 3.133 (4) | 168 (4) |
Symmetry codes: (i) ; (ii) ; (iii) .