| Literature DB >> 21200683 |
Yang Liu1, Wei-Na Xu, Xiao-Ling Zhang, Jian-Ping Ma, Dian-Shun Guo.
Abstract
The title compound, C(9)H(11)NO(4), is an inter-mediate for dyes and drugs. The O-C-C-O chain adopts a synclinal conformation. The crystal structure is stabilized by C-H⋯O hydrogen bonds.Entities:
Year: 2007 PMID: 21200683 PMCID: PMC2914974 DOI: 10.1107/S1600536807061636
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C9H11NO4 | |
| Mo | |
| Orthorhombic, | Cell parameters from 2528 reflections |
| θ = 2.7–27.8º | |
| µ = 0.11 mm−1 | |
| Block, colourless | |
| 0.49 × 0.43 × 0.38 mm | |
| Bruker SMART CCD area-detector diffractometer | 1023 independent reflections |
| Radiation source: fine-focus sealed tube | 982 reflections with |
| Monochromator: graphite | |
| θmax = 25.7º | |
| phi and ω scans | θmin = 2.0º |
| Absorption correction: multi-scan(SADABS; Bruker, 1999) | |
| 4034 measured reflections |
| Refinement on | Hydrogen site location: inferred from neighbouring sites |
| Least-squares matrix: full | H-atom parameters constrained |
| | |
| (Δ/σ)max = 0.001 | |
| Δρmax = 0.13 e Å−3 | |
| 1023 reflections | Δρmin = −0.12 e Å−3 |
| 130 parameters | Extinction correction: SHELXL97, Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
| 1 restraint | Extinction coefficient: 0.032 (4) |
| Primary atom site location: structure-invariant direct methods | Absolute structure: Flack (1983) |
| Secondary atom site location: difference Fourier map | Flack parameter: 2 (1) |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| C1 | −0.05088 (16) | 0.68859 (9) | −0.1216 (7) | 0.0407 (5) | |
| C2 | −0.08278 (16) | 0.62314 (9) | −0.1160 (6) | 0.0373 (5) | |
| H2 | −0.1522 | 0.6090 | −0.2160 | 0.045* | |
| C3 | −0.00976 (16) | 0.57971 (9) | 0.0401 (6) | 0.0341 (5) | |
| H3 | −0.0303 | 0.5357 | 0.0490 | 0.041* | |
| C4 | 0.09501 (15) | 0.60085 (8) | 0.1858 (6) | 0.0310 (5) | |
| C5 | 0.12605 (16) | 0.66669 (9) | 0.1780 (6) | 0.0382 (5) | |
| H5 | 0.1956 | 0.6811 | 0.2762 | 0.046* | |
| C6 | 0.05189 (18) | 0.71044 (9) | 0.0221 (7) | 0.0446 (6) | |
| H6 | 0.0715 | 0.7546 | 0.0143 | 0.054* | |
| C7 | 0.27095 (16) | 0.57084 (10) | 0.4767 (6) | 0.0363 (5) | |
| H7A | 0.2588 | 0.6054 | 0.6354 | 0.044* | |
| H7B | 0.3259 | 0.5866 | 0.3127 | 0.044* | |
| C8 | 0.31983 (17) | 0.51107 (10) | 0.6395 (6) | 0.0411 (5) | |
| H8A | 0.3888 | 0.5228 | 0.7677 | 0.049* | |
| H8B | 0.2608 | 0.4928 | 0.7851 | 0.049* | |
| C9 | 0.3945 (2) | 0.40593 (11) | 0.5514 (9) | 0.0536 (7) | |
| H9A | 0.4592 | 0.4164 | 0.6939 | 0.080* | |
| H9B | 0.4212 | 0.3762 | 0.3858 | 0.080* | |
| H9C | 0.3319 | 0.3858 | 0.6744 | 0.080* | |
| N1 | −0.12710 (18) | 0.73499 (9) | −0.2931 (7) | 0.0580 (6) | |
| O1 | −0.21750 (15) | 0.71456 (9) | −0.4228 (6) | 0.0687 (6) | |
| O2 | −0.09783 (16) | 0.79250 (8) | −0.3004 (9) | 0.0948 (10) | |
| O3 | 0.16033 (10) | 0.55315 (6) | 0.3289 (4) | 0.0354 (4) | |
| O4 | 0.35171 (11) | 0.46405 (7) | 0.4039 (4) | 0.0414 (4) |
| C1 | 0.0379 (10) | 0.0363 (10) | 0.0479 (14) | 0.0084 (8) | 0.0100 (11) | 0.0041 (11) |
| C2 | 0.0314 (8) | 0.0389 (10) | 0.0418 (12) | 0.0007 (7) | 0.0028 (10) | −0.0049 (11) |
| C3 | 0.0333 (9) | 0.0295 (8) | 0.0396 (11) | −0.0048 (7) | 0.0042 (9) | −0.0033 (10) |
| C4 | 0.0296 (9) | 0.0298 (9) | 0.0336 (11) | −0.0002 (7) | 0.0077 (8) | −0.0041 (9) |
| C5 | 0.0335 (9) | 0.0320 (9) | 0.0490 (14) | −0.0071 (7) | 0.0042 (10) | −0.0042 (11) |
| C6 | 0.0444 (11) | 0.0268 (9) | 0.0626 (16) | −0.0005 (8) | 0.0092 (12) | 0.0013 (11) |
| C7 | 0.0317 (9) | 0.0415 (10) | 0.0357 (13) | −0.0061 (8) | 0.0023 (9) | −0.0074 (9) |
| C8 | 0.0382 (10) | 0.0512 (12) | 0.0338 (12) | −0.0022 (9) | −0.0032 (10) | −0.0010 (11) |
| C9 | 0.0465 (11) | 0.0506 (12) | 0.0637 (17) | 0.0076 (9) | −0.0042 (13) | 0.0163 (14) |
| N1 | 0.0531 (11) | 0.0456 (11) | 0.0752 (18) | 0.0149 (9) | 0.0053 (12) | 0.0099 (13) |
| O1 | 0.0553 (10) | 0.0677 (11) | 0.0830 (15) | 0.0171 (8) | −0.0121 (12) | 0.0117 (13) |
| O2 | 0.0856 (13) | 0.0423 (9) | 0.157 (3) | 0.0116 (8) | −0.0187 (18) | 0.0259 (15) |
| O3 | 0.0298 (6) | 0.0289 (6) | 0.0474 (10) | −0.0041 (5) | −0.0013 (7) | 0.0000 (7) |
| O4 | 0.0450 (7) | 0.0415 (7) | 0.0376 (8) | 0.0067 (6) | −0.0007 (8) | 0.0043 (7) |
| C1—C6 | 1.375 (3) | C7—C8 | 1.497 (3) |
| C1—C2 | 1.385 (3) | C7—H7A | 0.9700 |
| C1—N1 | 1.461 (3) | C7—H7B | 0.9700 |
| C2—C3 | 1.370 (3) | C8—O4 | 1.410 (3) |
| C2—H2 | 0.9300 | C8—H8A | 0.9700 |
| C3—C4 | 1.393 (3) | C8—H8B | 0.9700 |
| C3—H3 | 0.9300 | C9—O4 | 1.418 (3) |
| C4—O3 | 1.356 (2) | C9—H9A | 0.9600 |
| C4—C5 | 1.390 (2) | C9—H9B | 0.9600 |
| C5—C6 | 1.382 (3) | C9—H9C | 0.9600 |
| C5—H5 | 0.9300 | N1—O2 | 1.221 (2) |
| C6—H6 | 0.9300 | N1—O1 | 1.224 (3) |
| C7—O3 | 1.434 (2) | ||
| C6—C1—C2 | 121.69 (19) | O3—C7—H7B | 110.2 |
| C6—C1—N1 | 119.50 (18) | C8—C7—H7B | 110.2 |
| C2—C1—N1 | 118.8 (2) | H7A—C7—H7B | 108.5 |
| C3—C2—C1 | 118.48 (19) | O4—C8—C7 | 110.1 (2) |
| C3—C2—H2 | 120.8 | O4—C8—H8A | 109.6 |
| C1—C2—H2 | 120.8 | C7—C8—H8A | 109.6 |
| C2—C3—C4 | 120.68 (17) | O4—C8—H8B | 109.6 |
| C2—C3—H3 | 119.7 | C7—C8—H8B | 109.6 |
| C4—C3—H3 | 119.7 | H8A—C8—H8B | 108.2 |
| O3—C4—C5 | 124.65 (18) | O4—C9—H9A | 109.5 |
| O3—C4—C3 | 115.11 (15) | O4—C9—H9B | 109.5 |
| C5—C4—C3 | 120.25 (19) | H9A—C9—H9B | 109.5 |
| C6—C5—C4 | 118.95 (19) | O4—C9—H9C | 109.5 |
| C6—C5—H5 | 120.5 | H9A—C9—H9C | 109.5 |
| C4—C5—H5 | 120.5 | H9B—C9—H9C | 109.5 |
| C1—C6—C5 | 119.96 (18) | O2—N1—O1 | 122.9 (2) |
| C1—C6—H6 | 120.0 | O2—N1—C1 | 118.5 (2) |
| C5—C6—H6 | 120.0 | O1—N1—C1 | 118.61 (18) |
| O3—C7—C8 | 107.69 (15) | C4—O3—C7 | 118.38 (14) |
| O3—C7—H7A | 110.2 | C8—O4—C9 | 111.3 (2) |
| C8—C7—H7A | 110.2 | ||
| C6—C1—C2—C3 | 0.6 (4) | O3—C7—C8—O4 | 67.3 (2) |
| N1—C1—C2—C3 | 178.8 (2) | C6—C1—N1—O2 | −0.9 (4) |
| C1—C2—C3—C4 | −0.9 (3) | C2—C1—N1—O2 | −179.2 (3) |
| C2—C3—C4—O3 | −179.2 (2) | C6—C1—N1—O1 | 179.2 (3) |
| C2—C3—C4—C5 | 0.8 (3) | C2—C1—N1—O1 | 0.9 (4) |
| O3—C4—C5—C6 | 179.6 (2) | C5—C4—O3—C7 | −1.6 (3) |
| C3—C4—C5—C6 | −0.4 (3) | C3—C4—O3—C7 | 178.42 (19) |
| C2—C1—C6—C5 | −0.2 (4) | C8—C7—O3—C4 | 175.33 (18) |
| N1—C1—C6—C5 | −178.4 (2) | C7—C8—O4—C9 | −177.94 (16) |
| C4—C5—C6—C1 | 0.1 (4) |
| H··· | ||||
| C5—H5···O1i | 0.93 | 2.65 | 3.419 (3) | 140 |
| C3—H3···O3ii | 0.93 | 2.50 | 3.317 (2) | 147 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| C5—H5⋯O1i | 0.93 | 2.65 | 3.419 (3) | 140 |
| C3—H3⋯O3ii | 0.93 | 2.50 | 3.317 (2) | 147 |
Symmetry codes: (i) ; (ii) .