| Literature DB >> 21200656 |
Di-Chang Zhong, Gui-Quan Guo, Xiao-Hua Zuo, Ji-Hua Deng, Lin Yuan, Rong-Hua Zhu.
Abstract
In the title compound, [Co(C(7)H(5)O(2))(2)(C(5)H(6)N(2))(2)], the Co(II) atom is hexa-coordinated by four O atoms from two benzoate anions, and two N atoms from two 2-amino-pyridine mol-ecules, resulting in a distorted octa-hedral geometry. Both benzoate anions act as bidentate ligands and both 2-amino-pyridine mol-ecules are coordinated to the metal through their pyridyl N atoms. The crystal packing is stabilized by inter-molecular N-H⋯O hydrogen bonds, C-H⋯π, and π-π stacking inter-actions involving benzoate anions and 2-amino-pyridine mol-ecules.Entities:
Year: 2007 PMID: 21200656 PMCID: PMC2947776 DOI: 10.1107/S1600536807063933
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Co(C7H5O2)2(C5H6N2)2] | |
| Monoclinic, | Mo |
| Hall symbol: -P 2yn | Cell parameters from 7256 reflections |
| θ = 2.4–27.2º | |
| µ = 0.79 mm−1 | |
| β = 96.7650 (10)º | Block, purple |
| 0.36 × 0.28 × 0.22 mm | |
| Bruker APEXII CCD area-detector diffractometer | 5288 independent reflections |
| Radiation source: fine-focus sealed tube | 4198 reflections with |
| Monochromator: graphite | |
| θmax = 27.7º | |
| phi and ω scans | θmin = 1.8º |
| Absorption correction: multi-scan(SADABS; Sheldrick, 1996) | |
| 19674 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H-atom parameters constrained | |
| | |
| (Δ/σ)max = 0.050 | |
| 5288 reflections | Δρmax = 0.32 e Å−3 |
| 298 parameters | Δρmin = −0.27 e Å−3 |
| 357 restraints | Extinction correction: none |
| Primary atom site location: structure-invariant direct methods |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Co1 | 0.29899 (3) | 0.42895 (2) | 0.123207 (11) | 0.04251 (10) | |
| N1 | 0.37446 (18) | 0.31734 (14) | 0.05834 (7) | 0.0434 (4) | |
| N2 | 0.3314 (2) | 0.44408 (15) | −0.02241 (8) | 0.0520 (4) | |
| H2A | 0.2773 | 0.4869 | −0.0019 | 0.062* | |
| H2B | 0.3439 | 0.4640 | −0.0584 | 0.062* | |
| N3 | 0.11106 (18) | 0.33308 (14) | 0.14242 (7) | 0.0429 (4) | |
| N4 | 0.2282 (2) | 0.2407 (2) | 0.22706 (9) | 0.0745 (6) | |
| H4A | 0.3108 | 0.2736 | 0.2208 | 0.089* | |
| H4B | 0.2254 | 0.1949 | 0.2574 | 0.089* | |
| O1 | 0.1750 (2) | 0.55468 (13) | 0.06636 (7) | 0.0651 (5) | |
| O2 | 0.2427 (2) | 0.60479 (15) | 0.15868 (8) | 0.0698 (5) | |
| O3 | 0.54634 (19) | 0.51020 (15) | 0.13357 (6) | 0.0602 (4) | |
| O4 | 0.45109 (17) | 0.39318 (15) | 0.19532 (6) | 0.0566 (4) | |
| C1 | 0.5594 (2) | 0.45573 (18) | 0.18175 (9) | 0.0444 (4) | |
| C2 | 0.6981 (2) | 0.4610 (2) | 0.22510 (10) | 0.0504 (5) | |
| C3 | 0.7083 (3) | 0.3990 (3) | 0.27797 (11) | 0.0690 (7) | |
| H3 | 0.6284 | 0.3539 | 0.2875 | 0.083* | |
| C4 | 0.8401 (4) | 0.4045 (3) | 0.31715 (15) | 0.0957 (10) | |
| H4 | 0.8483 | 0.3637 | 0.3533 | 0.115* | |
| C5 | 0.9565 (4) | 0.4697 (4) | 0.30237 (19) | 0.1039 (11) | |
| H5 | 1.0446 | 0.4716 | 0.3284 | 0.125* | |
| C6 | 0.9476 (3) | 0.5316 (4) | 0.2510 (2) | 0.1015 (11) | |
| H6 | 1.0283 | 0.5765 | 0.2421 | 0.122* | |
| C7 | 0.8173 (3) | 0.5283 (3) | 0.21134 (14) | 0.0760 (7) | |
| H7 | 0.8102 | 0.5710 | 0.1758 | 0.091* | |
| C8 | 0.1784 (2) | 0.62950 (18) | 0.10788 (10) | 0.0520 (5) | |
| C9 | 0.1044 (2) | 0.74580 (18) | 0.09538 (10) | 0.0499 (5) | |
| C10 | 0.1555 (3) | 0.8438 (2) | 0.12792 (12) | 0.0667 (6) | |
| H10 | 0.2364 | 0.8373 | 0.1575 | 0.080* | |
| C11 | 0.0872 (4) | 0.9512 (2) | 0.11675 (15) | 0.0842 (8) | |
| H11 | 0.1236 | 1.0173 | 0.1381 | 0.101* | |
| C12 | −0.0346 (4) | 0.9607 (3) | 0.07410 (16) | 0.0886 (9) | |
| H12 | −0.0813 | 1.0331 | 0.0670 | 0.106* | |
| C13 | −0.0872 (4) | 0.8644 (3) | 0.04219 (15) | 0.0880 (8) | |
| H13 | −0.1706 | 0.8709 | 0.0138 | 0.106* | |
| C14 | −0.0171 (3) | 0.7572 (2) | 0.05190 (12) | 0.0696 (7) | |
| H14 | −0.0515 | 0.6923 | 0.0292 | 0.084* | |
| C15 | −0.0147 (2) | 0.3464 (2) | 0.10357 (10) | 0.0529 (5) | |
| H15 | −0.0106 | 0.3956 | 0.0707 | 0.063* | |
| C16 | −0.1465 (3) | 0.2924 (2) | 0.10970 (12) | 0.0634 (6) | |
| H16 | −0.2295 | 0.3033 | 0.0815 | 0.076* | |
| C17 | −0.1537 (3) | 0.2207 (2) | 0.15906 (12) | 0.0643 (6) | |
| H17 | −0.2426 | 0.1834 | 0.1648 | 0.077* | |
| C18 | −0.0309 (3) | 0.2052 (2) | 0.19887 (11) | 0.0594 (6) | |
| H18 | −0.0353 | 0.1578 | 0.2324 | 0.071* | |
| C19 | 0.1036 (2) | 0.26105 (18) | 0.18948 (9) | 0.0479 (5) | |
| C20 | 0.3961 (2) | 0.34636 (17) | 0.00178 (8) | 0.0426 (4) | |
| C21 | 0.4848 (3) | 0.27532 (19) | −0.03144 (10) | 0.0532 (5) | |
| H21 | 0.5028 | 0.2980 | −0.0697 | 0.064* | |
| C22 | 0.5438 (3) | 0.1739 (2) | −0.00744 (11) | 0.0610 (6) | |
| H22 | 0.6025 | 0.1268 | −0.0291 | 0.073* | |
| C23 | 0.5157 (3) | 0.1407 (2) | 0.05002 (11) | 0.0614 (6) | |
| H23 | 0.5525 | 0.0704 | 0.0669 | 0.074* | |
| C24 | 0.4331 (3) | 0.21426 (19) | 0.08048 (10) | 0.0548 (5) | |
| H24 | 0.4156 | 0.1926 | 0.1190 | 0.066* |
| Co1 | 0.04193 (16) | 0.05067 (17) | 0.03496 (15) | −0.00377 (11) | 0.00463 (10) | 0.00284 (11) |
| N1 | 0.0453 (9) | 0.0461 (9) | 0.0388 (8) | −0.0058 (7) | 0.0051 (7) | 0.0010 (7) |
| N2 | 0.0644 (11) | 0.0542 (10) | 0.0393 (9) | 0.0026 (8) | 0.0141 (8) | 0.0041 (7) |
| N3 | 0.0430 (9) | 0.0459 (9) | 0.0404 (8) | −0.0037 (7) | 0.0080 (7) | −0.0016 (7) |
| N4 | 0.0630 (13) | 0.0910 (16) | 0.0676 (13) | −0.0130 (11) | 0.0000 (10) | 0.0383 (12) |
| O1 | 0.0964 (13) | 0.0450 (8) | 0.0594 (10) | −0.0035 (8) | 0.0324 (9) | −0.0087 (7) |
| O2 | 0.0713 (11) | 0.0598 (10) | 0.0745 (11) | 0.0096 (8) | −0.0071 (9) | −0.0133 (9) |
| O3 | 0.0701 (10) | 0.0665 (10) | 0.0455 (8) | −0.0001 (8) | 0.0132 (7) | 0.0081 (7) |
| O4 | 0.0462 (8) | 0.0740 (10) | 0.0483 (8) | −0.0136 (7) | 0.0003 (6) | 0.0080 (7) |
| C1 | 0.0448 (11) | 0.0493 (10) | 0.0399 (10) | 0.0008 (8) | 0.0088 (8) | −0.0041 (8) |
| C2 | 0.0403 (10) | 0.0578 (12) | 0.0537 (12) | 0.0024 (9) | 0.0082 (9) | −0.0181 (10) |
| C3 | 0.0601 (14) | 0.0847 (16) | 0.0591 (14) | 0.0156 (12) | −0.0058 (11) | −0.0075 (12) |
| C4 | 0.083 (2) | 0.119 (2) | 0.0781 (18) | 0.0320 (18) | −0.0214 (16) | −0.0218 (17) |
| C5 | 0.0558 (17) | 0.136 (3) | 0.113 (2) | 0.0282 (18) | −0.0207 (17) | −0.062 (2) |
| C6 | 0.0519 (15) | 0.125 (2) | 0.128 (3) | −0.0153 (16) | 0.0137 (17) | −0.060 (2) |
| C7 | 0.0550 (14) | 0.0890 (17) | 0.0862 (17) | −0.0142 (13) | 0.0174 (13) | −0.0327 (15) |
| C8 | 0.0520 (12) | 0.0452 (11) | 0.0625 (13) | −0.0078 (9) | 0.0225 (10) | −0.0096 (10) |
| C9 | 0.0507 (12) | 0.0462 (10) | 0.0556 (12) | −0.0041 (9) | 0.0179 (9) | −0.0073 (9) |
| C10 | 0.0746 (16) | 0.0515 (12) | 0.0732 (15) | −0.0025 (11) | 0.0052 (12) | −0.0129 (11) |
| C11 | 0.108 (2) | 0.0492 (13) | 0.097 (2) | 0.0020 (14) | 0.0172 (18) | −0.0177 (13) |
| C12 | 0.098 (2) | 0.0639 (16) | 0.106 (2) | 0.0221 (15) | 0.0193 (18) | 0.0063 (16) |
| C13 | 0.0807 (19) | 0.0802 (19) | 0.100 (2) | 0.0087 (15) | −0.0046 (16) | 0.0101 (16) |
| C14 | 0.0707 (16) | 0.0606 (14) | 0.0754 (16) | −0.0063 (12) | −0.0003 (13) | −0.0067 (12) |
| C15 | 0.0504 (12) | 0.0540 (12) | 0.0530 (12) | −0.0063 (9) | 0.0013 (9) | 0.0007 (10) |
| C16 | 0.0467 (12) | 0.0608 (13) | 0.0809 (16) | −0.0081 (10) | −0.0001 (11) | −0.0041 (12) |
| C17 | 0.0498 (13) | 0.0555 (13) | 0.0900 (17) | −0.0121 (10) | 0.0191 (12) | −0.0067 (12) |
| C18 | 0.0655 (14) | 0.0483 (11) | 0.0686 (14) | −0.0083 (10) | 0.0257 (12) | 0.0039 (10) |
| C19 | 0.0511 (11) | 0.0451 (10) | 0.0495 (11) | −0.0017 (9) | 0.0146 (9) | −0.0001 (9) |
| C20 | 0.0412 (10) | 0.0454 (10) | 0.0412 (9) | −0.0104 (8) | 0.0050 (8) | −0.0040 (8) |
| C21 | 0.0579 (13) | 0.0544 (12) | 0.0493 (11) | −0.0079 (10) | 0.0151 (9) | −0.0079 (9) |
| C22 | 0.0602 (14) | 0.0558 (13) | 0.0685 (14) | −0.0024 (10) | 0.0141 (11) | −0.0156 (11) |
| C23 | 0.0654 (14) | 0.0489 (12) | 0.0683 (14) | 0.0016 (10) | 0.0015 (11) | −0.0004 (11) |
| C24 | 0.0614 (13) | 0.0525 (12) | 0.0503 (12) | −0.0043 (10) | 0.0058 (10) | 0.0039 (10) |
| Co1—O4 | 2.0364 (15) | C6—H6 | 0.9300 |
| Co1—N3 | 2.1033 (16) | C7—H7 | 0.9300 |
| Co1—N1 | 2.1050 (16) | C8—C9 | 1.494 (3) |
| Co1—O1 | 2.1426 (18) | C9—C10 | 1.383 (3) |
| Co1—O2 | 2.2340 (17) | C9—C14 | 1.386 (3) |
| Co1—O3 | 2.4016 (17) | C10—C11 | 1.378 (4) |
| N1—C20 | 1.348 (2) | C10—H10 | 0.9300 |
| N1—C24 | 1.357 (3) | C11—C12 | 1.374 (4) |
| N2—C20 | 1.341 (3) | C11—H11 | 0.9300 |
| N2—H2A | 0.8600 | C12—C13 | 1.364 (5) |
| N2—H2B | 0.8600 | C12—H12 | 0.9300 |
| N3—C19 | 1.345 (3) | C13—C14 | 1.379 (4) |
| N3—C15 | 1.356 (3) | C13—H13 | 0.9300 |
| N4—C19 | 1.344 (3) | C14—H14 | 0.9300 |
| N4—H4A | 0.8600 | C15—C16 | 1.360 (3) |
| N4—H4B | 0.8600 | C15—H15 | 0.9300 |
| O1—C8 | 1.260 (3) | C16—C17 | 1.384 (4) |
| O2—C8 | 1.249 (3) | C16—H16 | 0.9300 |
| O3—C1 | 1.240 (2) | C17—C18 | 1.350 (4) |
| O4—C1 | 1.274 (2) | C17—H17 | 0.9300 |
| C1—C2 | 1.493 (3) | C18—C19 | 1.408 (3) |
| C2—C3 | 1.375 (3) | C18—H18 | 0.9300 |
| C2—C7 | 1.385 (3) | C20—C21 | 1.411 (3) |
| C3—C4 | 1.395 (4) | C21—C22 | 1.355 (3) |
| C3—H3 | 0.9300 | C21—H21 | 0.9300 |
| C4—C5 | 1.359 (6) | C22—C23 | 1.396 (3) |
| C4—H4 | 0.9300 | C22—H22 | 0.9300 |
| C5—C6 | 1.345 (5) | C23—C24 | 1.358 (3) |
| C5—H5 | 0.9300 | C23—H23 | 0.9300 |
| C6—C7 | 1.389 (4) | C24—H24 | 0.9300 |
| O4—Co1—N3 | 102.55 (6) | O2—C8—O1 | 119.5 (2) |
| O4—Co1—N1 | 100.77 (7) | O2—C8—C9 | 121.34 (19) |
| N3—Co1—N1 | 99.40 (6) | O1—C8—C9 | 119.2 (2) |
| O4—Co1—O1 | 149.63 (7) | C10—C9—C14 | 118.9 (2) |
| N3—Co1—O1 | 95.25 (7) | C10—C9—C8 | 120.1 (2) |
| N1—Co1—O1 | 100.34 (6) | C14—C9—C8 | 121.0 (2) |
| O4—Co1—O2 | 93.20 (7) | C11—C10—C9 | 120.3 (3) |
| N3—Co1—O2 | 99.72 (7) | C11—C10—H10 | 119.8 |
| N1—Co1—O2 | 153.21 (7) | C9—C10—H10 | 119.8 |
| O1—Co1—O2 | 59.31 (6) | C12—C11—C10 | 120.1 (3) |
| O4—Co1—O3 | 57.88 (5) | C12—C11—H11 | 120.0 |
| N3—Co1—O3 | 160.43 (6) | C10—C11—H11 | 120.0 |
| N1—Co1—O3 | 85.79 (6) | C13—C12—C11 | 120.2 (3) |
| O1—Co1—O3 | 102.40 (6) | C13—C12—H12 | 119.9 |
| O2—Co1—O3 | 82.44 (6) | C11—C12—H12 | 119.9 |
| C20—N1—C24 | 117.60 (18) | C12—C13—C14 | 120.2 (3) |
| C20—N1—Co1 | 126.75 (13) | C12—C13—H13 | 119.9 |
| C24—N1—Co1 | 114.33 (13) | C14—C13—H13 | 119.9 |
| C20—N2—H2A | 120.0 | C13—C14—C9 | 120.3 (3) |
| C20—N2—H2B | 120.0 | C13—C14—H14 | 119.8 |
| H2A—N2—H2B | 120.0 | C9—C14—H14 | 119.8 |
| C19—N3—C15 | 117.26 (17) | N3—C15—C16 | 124.0 (2) |
| C19—N3—Co1 | 126.38 (14) | N3—C15—H15 | 118.0 |
| C15—N3—Co1 | 116.35 (13) | C16—C15—H15 | 118.0 |
| C19—N4—H4A | 120.0 | C15—C16—C17 | 118.2 (2) |
| C19—N4—H4B | 120.0 | C15—C16—H16 | 120.9 |
| H4A—N4—H4B | 120.0 | C17—C16—H16 | 120.9 |
| C8—O1—Co1 | 92.57 (15) | C18—C17—C16 | 119.7 (2) |
| C8—O2—Co1 | 88.66 (13) | C18—C17—H17 | 120.2 |
| C1—O3—Co1 | 83.32 (13) | C16—C17—H17 | 120.2 |
| C1—O4—Co1 | 99.33 (12) | C17—C18—C19 | 119.8 (2) |
| O3—C1—O4 | 119.41 (19) | C17—C18—H18 | 120.1 |
| O3—C1—C2 | 122.31 (19) | C19—C18—H18 | 120.1 |
| O4—C1—C2 | 118.28 (18) | N4—C19—N3 | 118.84 (18) |
| C3—C2—C7 | 120.1 (2) | N4—C19—C18 | 120.1 (2) |
| C3—C2—C1 | 120.5 (2) | N3—C19—C18 | 121.1 (2) |
| C7—C2—C1 | 119.4 (2) | N2—C20—N1 | 118.69 (18) |
| C2—C3—C4 | 119.1 (3) | N2—C20—C21 | 120.54 (18) |
| C2—C3—H3 | 120.4 | N1—C20—C21 | 120.77 (19) |
| C4—C3—H3 | 120.4 | C22—C21—C20 | 119.9 (2) |
| C5—C4—C3 | 119.8 (4) | C22—C21—H21 | 120.1 |
| C5—C4—H4 | 120.1 | C20—C21—H21 | 120.1 |
| C3—C4—H4 | 120.1 | C21—C22—C23 | 119.5 (2) |
| C4—C5—C6 | 121.7 (3) | C21—C22—H22 | 120.3 |
| C4—C5—H5 | 119.1 | C23—C22—H22 | 120.3 |
| C6—C5—H5 | 119.2 | C24—C23—C22 | 118.0 (2) |
| C5—C6—C7 | 119.7 (3) | C24—C23—H23 | 121.0 |
| C5—C6—H6 | 120.1 | C22—C23—H23 | 121.0 |
| C7—C6—H6 | 120.1 | C23—C24—N1 | 124.2 (2) |
| C2—C7—C6 | 119.5 (3) | C23—C24—H24 | 117.9 |
| C2—C7—H7 | 120.2 | N1—C24—H24 | 117.9 |
| C6—C7—H7 | 120.2 |
| H··· | ||||
| N2—H2A···O1 | 0.86 | 2.03 | 2.866 (2) | 163 |
| N2—H2B···O3i | 0.86 | 2.07 | 2.891 (2) | 158 |
| N4—H4A···O4 | 0.86 | 1.99 | 2.810 (2) | 160 |
| N4—H4B···O2ii | 0.86 | 2.14 | 2.980 (2) | 167 |
| C—H···Cga | H···Cg | C···Cg | γb | C—H···Cg |
| C13—H13···Cg(N1→C24)iii | 2.95 | 3.719 (3) | 6.07 | 141 |
| π–π contacts | Cg···Cg | αa( | βb | Cg···Plane |
| Cg(N3→C19)···Cg(C2→C7)iv | 3.7145 (16) | 6.30 | 16.02 | 3.535 |
| Cg(C2→C7)···Cg(N3→C19)v | 3.7145 (16) | 6.30 | 17.87 | 3.570 |
| Co1—O4 | 2.0364 (15) |
| Co1—N3 | 2.1033 (16) |
| Co1—N1 | 2.1050 (16) |
| Co1—O1 | 2.1426 (18) |
| Co1—O2 | 2.2340 (17) |
| Co1—O3 | 2.4016 (17) |
| O4—Co1—N3 | 102.55 (6) |
| O4—Co1—N1 | 100.77 (7) |
| N3—Co1—N1 | 99.40 (6) |
| N3—Co1—O1 | 95.25 (7) |
| N1—Co1—O1 | 100.34 (6) |
| O4—Co1—O2 | 93.20 (7) |
| N3—Co1—O2 | 99.72 (7) |
| N1—Co1—O2 | 153.21 (7) |
| O1—Co1—O2 | 59.31 (6) |
| O4—Co1—O3 | 57.88 (5) |
| N3—Co1—O3 | 160.43 (6) |
| N1—Co1—O3 | 85.79 (6) |
| O1—Co1—O3 | 102.40 (6) |
| O2—Co1—O3 | 82.44 (6) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N2—H2 | 0.86 | 2.03 | 2.866 (2) | 163 |
| N2—H2 | 0.86 | 2.07 | 2.891 (2) | 158 |
| N4—H4 | 0.86 | 1.99 | 2.810 (2) | 160 |
| N4—H4 | 0.86 | 2.14 | 2.980 (2) | 167 |
| C13—H13⋯ | 0.93 | 2.95 | 3.719 (3) | 141 |
Symmetry codes: (i) ; (ii) ; (iii) −x, 1 − y, −z. Cg1 is the centroid of the N1/C20–C24 ring.
π–π Interactions (Å, °)
| π–π Contacts | α | β | ||
|---|---|---|---|---|
| 3.7145 (16) | 6.3 | 16.0 | 3.535 | |
| 3.7145 (16) | 6.3 | 17.9 | 3.570 |
Notes: αa = angle between planes of two aromatic rings. βb = angle between Cg⋯Cg line and normal to the plane of the first aromatic ring. Symmetry codes: (iv) −1 + x, y, z; (v) 1 + x, y, z.