| Literature DB >> 21200613 |
Chun-Wei Yeh1, Chia-Her Lin, Jhy-Der Chen.
Abstract
The title compound, (C(8)H(8)N(5))(2)[Mo(6)O(19)], was prepared by reaction of Mo(CO)(6) and dipyrimidylamine in refluxing toluene. The hexa-nuclear polyoxomolybdate anions lie on centres of inversion. Each 2-(pyrimidin-2-ylamino)pyrimidinium cation forms an intra-molecular N-H⋯N hydrogen bond and the cations are linked through self-complementary pairs of N-H⋯N hydrogen bonds into dimers across centres of inversion. The cations and anions are inter-linked through C-H⋯O contacts.Entities:
Year: 2007 PMID: 21200613 PMCID: PMC2914927 DOI: 10.1107/S1600536807062897
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| (C8H8N5)2[Mo6O19] | |
| Monoclinic, | Mo |
| Hall symbol: -P 2yn | Cell parameters from 31 reflections |
| θ = 4.8–12.5º | |
| µ = 2.48 mm−1 | |
| β = 105.471 (13)º | Plate, green |
| 0.40 × 0.20 × 0.05 mm | |
| Bruker P4 diffractometer | |
| Radiation source: fine-focus sealed tube | θmax = 25.0º |
| Monochromator: graphite | θmin = 2.4º |
| ω scans | |
| Absorption correction: ψ scan(North | |
| 3 standard reflections | |
| 3399 measured reflections | every 97 reflections |
| 2660 independent reflections | intensity decay: none |
| 1833 reflections with |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H-atom parameters constrained | |
| | |
| (Δ/σ)max < 0.001 | |
| 2660 reflections | Δρmax = 0.91 e Å−3 |
| 232 parameters | Δρmin = −1.78 e Å−3 |
| Primary atom site location: structure-invariant direct methods | Extinction correction: none |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Mo1 | 0.06601 (9) | 0.95848 (7) | 0.32376 (8) | 0.0380 (3) | |
| Mo2 | −0.15184 (9) | 0.87281 (7) | 0.46013 (9) | 0.0418 (3) | |
| Mo3 | 0.16049 (9) | 0.89727 (7) | 0.61876 (9) | 0.0434 (3) | |
| N1 | 0.4384 (8) | 0.9695 (6) | 0.3239 (8) | 0.040 (2) | |
| H1N | 0.4607 | 1.0166 | 0.3764 | 0.048* | |
| N2 | 0.4053 (10) | 1.0908 (7) | 0.1792 (9) | 0.052 (2) | |
| N3 | 0.3659 (9) | 0.9281 (7) | 0.1128 (8) | 0.043 (2) | |
| H3N | 0.3676 | 0.8676 | 0.1331 | 0.052* | |
| N4 | 0.4025 (9) | 0.8036 (6) | 0.2961 (9) | 0.046 (2) | |
| N5 | 0.4845 (8) | 0.8709 (6) | 0.4968 (9) | 0.040 (2) | |
| O1 | 0.1142 (7) | 0.9318 (7) | 0.1952 (7) | 0.065 (2) | |
| O2 | −0.2622 (8) | 0.7811 (6) | 0.4336 (9) | 0.072 (3) | |
| O3 | 0.2743 (9) | 0.8222 (7) | 0.7019 (9) | 0.076 (3) | |
| O4 | 0.0000 | 1.0000 | 0.5000 | 0.0286 (19) | |
| O5 | −0.0732 (7) | 0.8658 (5) | 0.3211 (7) | 0.052 (2) | |
| O6 | 0.1775 (7) | 1.0683 (5) | 0.3902 (7) | 0.0414 (17) | |
| O7 | 0.1797 (7) | 0.8825 (5) | 0.4514 (7) | 0.0446 (18) | |
| O8 | 0.0033 (7) | 0.8138 (5) | 0.5623 (8) | 0.056 (2) | |
| O9 | −0.0736 (7) | 1.0520 (6) | 0.2626 (6) | 0.052 (2) | |
| O10 | −0.2525 (6) | 0.9816 (6) | 0.3719 (6) | 0.0465 (19) | |
| C1 | 0.4034 (10) | 0.9955 (8) | 0.1993 (9) | 0.041 (3) | |
| C2 | 0.3673 (12) | 1.1171 (10) | 0.0578 (12) | 0.060 (3) | |
| H2 | 0.3699 | 1.1827 | 0.0376 | 0.072* | |
| C3 | 0.3249 (13) | 1.0509 (11) | −0.0372 (12) | 0.064 (4) | |
| H3 | 0.2968 | 1.0711 | −0.1202 | 0.077* | |
| C4 | 0.3252 (12) | 0.9553 (10) | −0.0069 (11) | 0.055 (3) | |
| H4 | 0.2971 | 0.9089 | −0.0694 | 0.066* | |
| C5 | 0.4425 (9) | 0.8789 (7) | 0.3750 (10) | 0.037 (2) | |
| C6 | 0.4060 (12) | 0.7135 (9) | 0.3495 (12) | 0.054 (3) | |
| H6 | 0.3774 | 0.6596 | 0.2987 | 0.064* | |
| C7 | 0.4491 (11) | 0.7019 (8) | 0.4714 (11) | 0.048 (3) | |
| H7 | 0.4537 | 0.6402 | 0.5068 | 0.057* | |
| C8 | 0.4876 (10) | 0.7831 (8) | 0.5462 (10) | 0.046 (3) | |
| H8 | 0.5161 | 0.7758 | 0.6327 | 0.055* |
| Mo1 | 0.0374 (5) | 0.0496 (6) | 0.0324 (5) | −0.0021 (4) | 0.0188 (4) | −0.0061 (4) |
| Mo2 | 0.0393 (5) | 0.0414 (5) | 0.0508 (6) | −0.0114 (4) | 0.0228 (4) | −0.0095 (4) |
| Mo3 | 0.0400 (5) | 0.0502 (6) | 0.0424 (6) | 0.0122 (4) | 0.0151 (4) | 0.0098 (5) |
| N1 | 0.043 (5) | 0.041 (5) | 0.035 (5) | −0.002 (4) | 0.009 (4) | −0.005 (4) |
| N2 | 0.059 (6) | 0.049 (6) | 0.048 (6) | −0.006 (5) | 0.016 (5) | 0.000 (5) |
| N3 | 0.053 (5) | 0.046 (5) | 0.034 (5) | 0.004 (4) | 0.016 (4) | −0.005 (4) |
| N4 | 0.047 (5) | 0.042 (5) | 0.051 (6) | 0.003 (4) | 0.018 (4) | −0.007 (5) |
| N5 | 0.036 (5) | 0.045 (5) | 0.038 (5) | 0.004 (4) | 0.009 (4) | 0.001 (4) |
| O1 | 0.046 (4) | 0.120 (7) | 0.036 (4) | −0.014 (5) | 0.023 (4) | −0.025 (5) |
| O2 | 0.069 (6) | 0.067 (6) | 0.100 (7) | −0.029 (5) | 0.054 (5) | −0.034 (5) |
| O3 | 0.067 (6) | 0.088 (7) | 0.075 (6) | 0.035 (5) | 0.026 (5) | 0.038 (5) |
| O4 | 0.024 (4) | 0.037 (5) | 0.029 (5) | −0.002 (4) | 0.014 (4) | −0.009 (4) |
| O5 | 0.047 (4) | 0.055 (5) | 0.061 (5) | −0.024 (4) | 0.029 (4) | −0.029 (4) |
| O6 | 0.040 (4) | 0.042 (4) | 0.049 (4) | 0.004 (3) | 0.025 (3) | 0.003 (3) |
| O7 | 0.042 (4) | 0.042 (4) | 0.058 (5) | 0.012 (3) | 0.028 (4) | 0.003 (4) |
| O8 | 0.062 (5) | 0.032 (4) | 0.085 (6) | 0.012 (4) | 0.037 (5) | 0.014 (4) |
| O9 | 0.042 (4) | 0.083 (6) | 0.034 (4) | 0.013 (4) | 0.017 (3) | 0.016 (4) |
| O10 | 0.028 (3) | 0.077 (5) | 0.035 (4) | −0.003 (4) | 0.009 (3) | −0.002 (4) |
| C1 | 0.046 (6) | 0.047 (7) | 0.034 (6) | −0.002 (5) | 0.018 (5) | 0.004 (5) |
| C2 | 0.063 (8) | 0.066 (8) | 0.053 (8) | 0.001 (7) | 0.021 (7) | 0.007 (7) |
| C3 | 0.067 (8) | 0.085 (10) | 0.039 (7) | −0.007 (7) | 0.011 (6) | 0.010 (7) |
| C4 | 0.055 (7) | 0.066 (8) | 0.046 (8) | 0.004 (6) | 0.017 (6) | −0.005 (6) |
| C5 | 0.025 (5) | 0.047 (6) | 0.038 (6) | −0.001 (4) | 0.008 (4) | −0.012 (5) |
| C6 | 0.061 (7) | 0.044 (7) | 0.060 (9) | 0.002 (6) | 0.023 (6) | −0.012 (6) |
| C7 | 0.058 (7) | 0.035 (6) | 0.048 (8) | 0.000 (5) | 0.011 (6) | −0.002 (5) |
| C8 | 0.051 (7) | 0.052 (7) | 0.041 (7) | 0.007 (5) | 0.023 (5) | 0.008 (6) |
| Mo1—O1 | 1.673 (7) | N3—C1 | 1.315 (13) |
| Mo1—O7 | 1.897 (7) | N3—C4 | 1.333 (14) |
| Mo1—O9 | 1.926 (7) | N3—H3N | 0.860 |
| Mo1—O5 | 1.926 (7) | N4—C5 | 1.347 (13) |
| Mo1—O6 | 1.927 (7) | N4—C6 | 1.369 (15) |
| Mo1—O4 | 2.3087 (9) | N5—C5 | 1.308 (13) |
| Mo2—O2 | 1.680 (8) | N5—C8 | 1.321 (13) |
| Mo2—O8 | 1.892 (8) | O4—Mo1i | 2.3087 (9) |
| Mo2—O6i | 1.927 (7) | O4—Mo3i | 2.3137 (9) |
| Mo2—O5 | 1.931 (8) | O4—Mo2i | 2.3210 (9) |
| Mo2—O10 | 1.935 (7) | O6—Mo2i | 1.927 (7) |
| Mo2—O4 | 2.3210 (9) | O9—Mo3i | 1.916 (7) |
| Mo3—O3 | 1.655 (8) | O10—Mo3i | 1.911 (8) |
| Mo3—O10i | 1.911 (8) | C2—C3 | 1.372 (18) |
| Mo3—O9i | 1.916 (7) | C2—H2 | 0.930 |
| Mo3—O7 | 1.928 (8) | C3—C4 | 1.356 (19) |
| Mo3—O8 | 1.963 (8) | C3—H3 | 0.930 |
| Mo3—O4 | 2.3137 (9) | C4—H4 | 0.930 |
| N1—C5 | 1.364 (13) | C6—C7 | 1.314 (16) |
| N1—C1 | 1.378 (13) | C6—H6 | 0.930 |
| N1—H1N | 0.860 | C7—C8 | 1.384 (15) |
| N2—C1 | 1.329 (14) | C7—H7 | 0.930 |
| N2—C2 | 1.347 (15) | C8—H8 | 0.930 |
| O1—Mo1—O7 | 104.1 (4) | C1—N3—H3N | 120.6 |
| O1—Mo1—O9 | 102.6 (4) | C4—N3—H3N | 120.6 |
| O7—Mo1—O9 | 153.3 (3) | C5—N4—C6 | 116.5 (10) |
| O1—Mo1—O5 | 103.8 (4) | C5—N5—C8 | 117.9 (9) |
| O7—Mo1—O5 | 88.1 (3) | Mo1i—O4—Mo1 | 180.0 |
| O9—Mo1—O5 | 86.5 (4) | Mo1i—O4—Mo3 | 90.22 (4) |
| O1—Mo1—O6 | 102.0 (4) | Mo1—O4—Mo3 | 89.78 (4) |
| O7—Mo1—O6 | 87.3 (3) | Mo1i—O4—Mo3i | 89.78 (4) |
| O9—Mo1—O6 | 86.2 (3) | Mo1—O4—Mo3i | 90.22 (4) |
| O5—Mo1—O6 | 154.1 (3) | Mo3—O4—Mo3i | 180.0 |
| O1—Mo1—O4 | 178.3 (4) | Mo1i—O4—Mo2 | 90.27 (3) |
| O7—Mo1—O4 | 76.9 (2) | Mo1—O4—Mo2 | 89.73 (3) |
| O9—Mo1—O4 | 76.4 (2) | Mo3—O4—Mo2 | 90.14 (4) |
| O5—Mo1—O4 | 77.4 (2) | Mo3i—O4—Mo2 | 89.86 (4) |
| O6—Mo1—O4 | 76.7 (2) | Mo1i—O4—Mo2i | 89.73 (3) |
| O2—Mo2—O8 | 102.7 (4) | Mo1—O4—Mo2i | 90.27 (3) |
| O2—Mo2—O6i | 102.7 (4) | Mo3—O4—Mo2i | 89.86 (4) |
| O8—Mo2—O6i | 87.6 (3) | Mo3i—O4—Mo2i | 90.14 (4) |
| O2—Mo2—O5 | 103.9 (3) | Mo2—O4—Mo2i | 180.0 |
| O8—Mo2—O5 | 88.8 (4) | Mo1—O5—Mo2 | 115.7 (3) |
| O6i—Mo2—O5 | 153.3 (3) | Mo2i—O6—Mo1 | 116.7 (3) |
| O2—Mo2—O10 | 103.7 (4) | Mo1—O7—Mo3 | 117.0 (3) |
| O8—Mo2—O10 | 153.6 (3) | Mo2—O8—Mo3 | 116.7 (3) |
| O6i—Mo2—O10 | 85.9 (3) | Mo3i—O9—Mo1 | 116.9 (3) |
| O5—Mo2—O10 | 85.6 (3) | Mo3i—O10—Mo2 | 116.6 (3) |
| O2—Mo2—O4 | 179.1 (3) | N3—C1—N2 | 125.9 (10) |
| O8—Mo2—O4 | 77.2 (2) | N3—C1—N1 | 119.6 (10) |
| O6i—Mo2—O4 | 76.4 (2) | N2—C1—N1 | 114.3 (10) |
| O5—Mo2—O4 | 77.0 (2) | N2—C2—C3 | 122.4 (13) |
| O10—Mo2—O4 | 76.4 (2) | N2—C2—H2 | 118.8 |
| O3—Mo3—O10i | 103.7 (4) | C3—C2—H2 | 118.8 |
| O3—Mo3—O9i | 104.2 (4) | C4—C3—C2 | 118.3 (12) |
| O10i—Mo3—O9i | 88.2 (3) | C4—C3—H3 | 120.9 |
| O3—Mo3—O7 | 103.1 (4) | C2—C3—H3 | 120.9 |
| O10i—Mo3—O7 | 88.0 (3) | N3—C4—C3 | 119.8 (12) |
| O9i—Mo3—O7 | 152.6 (3) | N3—C4—H4 | 120.1 |
| O3—Mo3—O8 | 103.1 (4) | C3—C4—H4 | 120.1 |
| O10i—Mo3—O8 | 153.1 (3) | N5—C5—N4 | 124.5 (10) |
| O9i—Mo3—O8 | 85.6 (3) | N5—C5—N1 | 118.0 (9) |
| O7—Mo3—O8 | 85.7 (3) | N4—C5—N1 | 117.5 (9) |
| O3—Mo3—O4 | 179.0 (4) | C7—C6—N4 | 121.1 (11) |
| O10i—Mo3—O4 | 77.1 (2) | C7—C6—H6 | 119.5 |
| O9i—Mo3—O4 | 76.4 (2) | N4—C6—H6 | 119.5 |
| O7—Mo3—O4 | 76.2 (2) | C6—C7—C8 | 118.8 (11) |
| O8—Mo3—O4 | 76.0 (2) | C6—C7—H7 | 120.6 |
| C5—N1—C1 | 128.6 (9) | C8—C7—H7 | 120.6 |
| C5—N1—H1N | 115.7 | N5—C8—C7 | 121.2 (10) |
| C1—N1—H1N | 115.7 | N5—C8—H8 | 119.4 |
| C1—N2—C2 | 114.8 (10) | C7—C8—H8 | 119.4 |
| C1—N3—C4 | 118.7 (10) |
| H··· | ||||
| N3—H3N···N4 | 0.86 | 1.95 | 2.605 (12) | 132 |
| N1—H1N···N5ii | 0.86 | 2.07 | 2.924 (13) | 180 |
| C2—H2···O8iii | 0.93 | 2.65 | 3.444 (14) | 144 |
| C4—H4···O2iv | 0.93 | 2.69 | 3.391 (14) | 133 |
| C6—H6···O6v | 0.93 | 2.38 | 3.250 (15) | 157 |
| C7—H7···O1vi | 0.93 | 2.51 | 3.196 (14) | 131 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N3—H3N⋯N4 | 0.86 | 1.95 | 2.605 (12) | 132 |
| N1—H1N⋯N5i | 0.86 | 2.07 | 2.924 (13) | 180 |
| C2—H2⋯O8ii | 0.93 | 2.65 | 3.444 (14) | 144 |
| C4—H4⋯O2iii | 0.93 | 2.69 | 3.391 (14) | 133 |
| C6—H6⋯O6iv | 0.93 | 2.38 | 3.250 (15) | 157 |
| C7—H7⋯O1v | 0.93 | 2.51 | 3.196 (14) | 131 |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) .