Literature DB >> 21200602

catena-Poly[[(nitrato-κO)(1,10-phenanthroline-κN,N')manganese(II)]-μ-nitrato-κO:O'].

T Liu, J Y Zhu.   

Abstract

In the crystal structure of the title compound, [Mn(NO(3))(2)(C(12)H(8)N(2))](n), the Mn(II) atoms are linked by nitrate ligands to form a chain. Each Mn(II) atom is five-coordinated by two N atoms of a 1,10-phenanthroline ligand and three O atoms of two nitrates within a trigonal-bipyramidal coordination geometry. In the crystal structure, the chains are linked by hydrogen bonds into a polymeric ribbon structure.

Entities:  

Year:  2007        PMID: 21200602      PMCID: PMC2914918          DOI: 10.1107/S160053680706254X

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For general background, see: Desiraju (1995 ▶, 1997 ▶); Braga et al. (1998 ▶); Wu et al. (2003 ▶); Pan & Xu (2004 ▶); Liu et al. (2004 ▶); Li et al. (2005 ▶). For bond-length data, see: Allen et al. (1987 ▶).

Experimental

Crystal data

[Mn(NO3)2(C12H8N2)] M = 359.16 Monoclinic, a = 8.7116 (13) Å b = 9.1824 (11) Å c = 17.1183 (17) Å β = 102.159 (4)° V = 1338.6 (3) Å3 Z = 4 Mo Kα radiation μ = 1.03 mm−1 T = 273 (2) K 0.42 × 0.23 × 0.20 mm

Data collection

Bruker APEXII area-detector diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.672, T max = 0.819 8124 measured reflections 2545 independent reflections 2194 reflections with I > 2σ(I) R int = 0.017

Refinement

R[F 2 > 2σ(F 2)] = 0.033 wR(F 2) = 0.093 S = 1.01 2545 reflections 209 parameters H-atom parameters constrained Δρmax = 0.36 e Å−3 Δρmin = −0.29 e Å−3 Data collection: APEX2 (Bruker, 2005 ▶); cell refinement: SAINT (Siemens, 1996 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 1997 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997 ▶); molecular graphics: SHELXTL (Siemens, 1996 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks I, global. DOI: 10.1107/S160053680706254X/at2505sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S160053680706254X/at2505Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Mn(NO3)2(C12H8N2)]F000 = 724
Mr = 359.16Dx = 1.782 Mg m3
Monoclinic, P21/nMo Kα radiation λ = 0.71073 Å
Hall symbol: -p 2ynCell parameters from 5711 reflections
a = 8.7116 (13) Åθ = 2.1–27.1º
b = 9.1824 (11) ŵ = 1.03 mm1
c = 17.1183 (17) ÅT = 273 (2) K
β = 102.159 (4)ºPrism, colourless
V = 1338.6 (3) Å30.42 × 0.23 × 0.20 mm
Z = 4
Bruker APEXII area-detector diffractometer2545 independent reflections
Radiation source: fine-focus sealed tube2194 reflections with I > 2σ(I)
Monochromator: graphiteRint = 0.017
T = 273(2) Kθmax = 26.1º
φ and ω scansθmin = 2.4º
Absorption correction: multi-scan(SADABS; Sheldrick, 1996)h = −10→10
Tmin = 0.672, Tmax = 0.819k = −11→11
8124 measured reflectionsl = −21→21
Refinement on F2Hydrogen site location: inferred from neighbouring sites
Least-squares matrix: fullH-atom parameters constrained
R[F2 > 2σ(F2)] = 0.033  w = 1/[σ2(Fo2) + (0.0602P)2 + 0.5483P] where P = (Fo2 + 2Fc2)/3
wR(F2) = 0.093(Δ/σ)max = 0.001
S = 1.01Δρmax = 0.36 e Å3
2545 reflectionsΔρmin = −0.29 e Å3
209 parametersExtinction correction: SHELXL, Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.0179 (16)
Secondary atom site location: difference Fourier map
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Mn10.66502 (3)0.92794 (3)0.803177 (16)0.03141 (15)
O10.6879 (2)0.73412 (19)0.75168 (10)0.0520 (4)
O20.5484 (2)1.0052 (2)0.70206 (11)0.0587 (5)
O30.3466 (3)0.9003 (3)0.72914 (16)0.0906 (8)
O40.3287 (3)1.0285 (3)0.62191 (14)0.0772 (6)
O50.6208 (2)0.5057 (2)0.74824 (12)0.0593 (5)
O60.5458 (3)0.6518 (2)0.83135 (14)0.0755 (6)
N10.6080 (2)1.0941 (2)0.86880 (13)0.0464 (5)
N20.7953 (2)0.8670 (2)0.90779 (12)0.0452 (4)
N30.6159 (2)0.6285 (2)0.77856 (13)0.0470 (5)
N40.4025 (3)0.9772 (3)0.68402 (13)0.0516 (5)
C10.5211 (3)1.2101 (3)0.84667 (17)0.0538 (6)
H10.48291.22630.79240.065*
C20.4835 (3)1.3108 (3)0.90171 (19)0.0600 (7)
H20.42271.39220.88380.072*
C30.5365 (3)1.2882 (3)0.98057 (19)0.0601 (7)
H30.51001.35231.01760.072*
C40.6324 (3)1.1667 (3)1.00645 (15)0.0488 (6)
C50.6988 (3)1.1334 (3)1.08805 (16)0.0568 (6)
H50.67491.19191.12820.068*
C60.7949 (3)1.0191 (3)1.10763 (16)0.0553 (6)
H60.83611.00001.16130.066*
C70.8364 (3)0.9249 (3)1.04801 (15)0.0466 (5)
C80.9424 (3)0.8080 (3)1.06332 (15)0.0537 (6)
H80.99240.78631.11560.064*
C90.9722 (3)0.7263 (3)1.00167 (17)0.0564 (6)
H91.04380.64991.01160.068*
C100.8953 (3)0.7578 (3)0.92411 (16)0.0522 (6)
H100.91460.70040.88250.063*
C110.7670 (3)0.9514 (3)0.96834 (14)0.0420 (5)
C120.6658 (3)1.0727 (2)0.94761 (15)0.0428 (5)
U11U22U33U12U13U23
Mn10.0374 (2)0.0301 (2)0.02529 (19)0.00252 (12)0.00320 (13)0.00100 (11)
O10.0628 (10)0.0482 (10)0.0459 (9)−0.0052 (8)0.0131 (8)−0.0007 (7)
O20.0537 (10)0.0658 (13)0.0514 (10)−0.0071 (9)−0.0008 (8)0.0128 (9)
O30.0735 (14)0.130 (2)0.0678 (14)−0.0247 (14)0.0136 (12)0.0269 (15)
O40.0677 (12)0.0828 (14)0.0691 (14)−0.0060 (11)−0.0129 (11)0.0214 (12)
O50.0581 (10)0.0475 (11)0.0722 (12)−0.0049 (8)0.0134 (9)−0.0144 (9)
O60.0910 (15)0.0644 (13)0.0845 (15)−0.0048 (11)0.0492 (13)−0.0075 (11)
N10.0483 (11)0.0441 (11)0.0460 (11)0.0003 (9)0.0084 (9)0.0041 (9)
N20.0508 (11)0.0414 (10)0.0424 (10)0.0015 (9)0.0074 (8)−0.0026 (8)
N30.0473 (10)0.0451 (11)0.0493 (11)0.0015 (9)0.0116 (9)−0.0043 (9)
N40.0535 (12)0.0524 (12)0.0466 (11)−0.0017 (10)0.0053 (10)0.0018 (10)
C10.0558 (14)0.0469 (14)0.0563 (14)0.0055 (12)0.0066 (12)0.0070 (12)
C20.0587 (15)0.0467 (14)0.0740 (18)0.0118 (12)0.0123 (13)0.0039 (13)
C30.0628 (16)0.0506 (15)0.0707 (17)0.0072 (12)0.0227 (14)−0.0085 (13)
C40.0494 (13)0.0478 (13)0.0526 (13)−0.0020 (11)0.0185 (11)−0.0032 (11)
C50.0626 (15)0.0618 (16)0.0490 (14)−0.0020 (13)0.0187 (12)−0.0102 (12)
C60.0608 (15)0.0638 (16)0.0419 (13)0.0004 (13)0.0121 (11)−0.0010 (12)
C70.0505 (13)0.0471 (13)0.0419 (12)−0.0048 (10)0.0087 (10)0.0029 (10)
C80.0596 (14)0.0527 (14)0.0449 (13)−0.0003 (12)0.0025 (11)0.0060 (11)
C90.0594 (15)0.0464 (14)0.0592 (15)0.0089 (12)0.0026 (12)0.0028 (12)
C100.0589 (14)0.0439 (13)0.0519 (14)0.0078 (11)0.0072 (12)−0.0025 (11)
C110.0445 (12)0.0393 (11)0.0431 (12)−0.0042 (9)0.0114 (10)−0.0007 (9)
C120.0428 (11)0.0400 (12)0.0468 (12)−0.0047 (9)0.0119 (10)0.0017 (9)
Mn1—O12.0145 (18)C2—C31.348 (4)
Mn1—O21.9470 (17)C2—H20.9300
Mn1—O5i2.3361 (19)C3—C41.408 (4)
Mn1—N12.018 (2)C3—H30.9300
Mn1—N21.988 (2)C4—C121.403 (3)
O1—N31.291 (3)C4—C51.428 (4)
O2—N41.269 (3)C5—C61.341 (4)
O3—N41.221 (3)C5—H50.9300
O4—N41.216 (3)C6—C71.441 (4)
O5—N31.246 (3)C6—H60.9300
O5—Mn1ii2.3362 (19)C7—C111.392 (4)
O6—N31.212 (3)C7—C81.404 (4)
N1—C11.316 (3)C8—C91.364 (4)
N1—C121.351 (3)C8—H80.9300
N2—C101.319 (3)C9—C101.386 (4)
N2—C111.358 (3)C9—H90.9300
C1—C21.407 (4)C10—H100.9300
C1—H10.9300C11—C121.419 (3)
O1—Mn1—O5i86.83 (7)C2—C3—C4119.5 (3)
O2—Mn1—O5i82.09 (7)C2—C3—H3120.2
O1—Mn1—N1165.99 (8)C4—C3—H3120.2
O1—Mn1—N293.16 (8)C12—C4—C3117.4 (2)
O2—Mn1—N194.35 (9)C12—C4—C5117.9 (2)
O2—Mn1—N2174.52 (8)C3—C4—C5124.7 (2)
O5—Mn1—N1i138.26 (3)C6—C5—C4121.0 (2)
O5—Mn1—N2i125.23 (4)C6—C5—H5119.5
N1—Mn1—N282.65 (8)C4—C5—H5119.5
N3—O1—Mn1114.06 (14)C5—C6—C7122.0 (2)
N4—O2—Mn1116.78 (15)C5—C6—H6119.0
N3—O5—Mn1ii122.25 (15)C7—C6—H6119.0
C1—N1—C12118.4 (2)C11—C7—C8116.7 (2)
C1—N1—Mn1130.26 (19)C11—C7—C6117.8 (2)
C12—N1—Mn1111.27 (16)C8—C7—C6125.4 (2)
C10—N2—C11119.4 (2)C9—C8—C7120.1 (2)
C10—N2—Mn1129.13 (17)C9—C8—H8120.0
C11—N2—Mn1111.47 (16)C7—C8—H8120.0
O6—N3—O5122.5 (2)C8—C9—C10119.6 (2)
O6—N3—O1119.4 (2)C8—C9—H9120.2
O5—N3—O1118.0 (2)C10—C9—H9120.2
O4—N4—O3124.7 (2)N2—C10—C9121.7 (2)
O4—N4—O2116.9 (2)N2—C10—H10119.1
O3—N4—O2118.4 (2)C9—C10—H10119.1
N1—C1—C2122.7 (3)N2—C11—C7122.5 (2)
N1—C1—H1118.7N2—C11—C12117.4 (2)
C2—C1—H1118.7C7—C11—C12120.1 (2)
C3—C2—C1119.4 (3)N1—C12—C4122.5 (2)
C3—C2—H2120.3N1—C12—C11116.4 (2)
C1—C2—H2120.3C4—C12—C11121.0 (2)
D—H···AD—HH···AD···AD—H···A
C2—H2···O4iii0.932.513.331 (4)148
C10—H10···O2ii0.932.373.276 (3)165
Mn1—O12.0145 (18)
Mn1—O21.9470 (17)
Mn1—O5i2.3361 (19)
Mn1—N12.018 (2)
Mn1—N21.988 (2)
O1—Mn1—O5i86.83 (7)
O2—Mn1—O5i82.09 (7)
O1—Mn1—N1165.99 (8)
O1—Mn1—N293.16 (8)
O2—Mn1—N194.35 (9)
O2—Mn1—N2174.52 (8)
O5—Mn1—N1i138.26 (3)
O5—Mn1—N2i125.23 (4)
N1—Mn1—N282.65 (8)

Symmetry code: (i) .

Table 2

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C2—H2⋯O4ii0.932.513.331 (4)148
C10—H10⋯O2iii0.932.373.276 (3)165

Symmetry codes: (ii) ; (iii) .

  3 in total

1.  Crystal Engineering and Organometallic Architecture.

Authors:  Dario Braga; Fabrizia Grepioni; Gautam R. Desiraju
Journal:  Chem Rev       Date:  1998-06-18       Impact factor: 60.622

2.  catena-Poly[[bis(1H-benzimidazole-kappaN3)(salicylato-kappaO)copper(II)]-mu-salicylato-O,O':O''].

Authors:  Hong Li; Kai-Liang Yin; Duan-Jun Xu
Journal:  Acta Crystallogr C       Date:  2004-12-11       Impact factor: 1.172

3.  Catena-poly[[[aquabis(1H-benzimidazole-kappaN(3))cadmium(II)]-micro-phthalato-kappa(3)O,O':O"] hemihydrate].

Authors:  Bing Xin Liu; Jian Rong Su; Duan Jun Xu
Journal:  Acta Crystallogr C       Date:  2004-03-31       Impact factor: 1.172

  3 in total

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