Literature DB >> 21200571

Poly[μ(3)-aqua-μ(2)-2,4-dinitro-phenolato-rubidium(I)].

Zhangqin Yang1, Mancheng Hu, Xiuhang Wang.   

Abstract

The asymmetric unit of the title compound, [Rb(C(6)H(3)N(2)O(5))(H(2)O)](n), comprises a rubidium cation, a 2,4-dinitro-phenoxide anion and a water mol-ecule. The Rb(+) cation is 11-coordinated by O atoms from 2,4-dinitro-phenolate anions and water mol-ecules. The metal centre is firstly coordinated by two μ(3)-H(2)O to form a one-dimensional ladder-shaped unit, [Rb(2)(μ(3)-H(2)O)(2)], which is further linked by 2,4-dinitro-phenolate to give the three-dimensional framework of the title compound. The crystal structure involves O-H⋯O hydrogen bonds.

Entities:  

Year:  2007        PMID: 21200571      PMCID: PMC2915150          DOI: 10.1107/S1600536807066792

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related literature, see: Abrahams et al. (1998 ▶); Brill et al. (2000 ▶); Cametti et al. (2005 ▶); Cole & Holt (1986 ▶); Devi & Vidyasagar (2000 ▶); Harrowfield et al. (1995 ▶); Hu et al. (2005 ▶); Klaui et al. (1987 ▶); Shannon (1976 ▶); von Prondzinski et al. (2007 ▶); Weinert et al. (2003 ▶).

Experimental

Crystal data

[Rb(C6H3N2O5)(H2O)] M = 286.59 Monoclinic, a = 5.8519 (18) Å b = 20.846 (7) Å c = 7.412 (2) Å β = 93.148 (5)° V = 902.8 (5) Å3 Z = 4 Mo Kα radiation μ = 5.50 mm−1 T = 293 (2) K 0.40 × 0.35 × 0.30 mm

Data collection

Bruker APEXII CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.125, T max = 0.202 4449 measured reflections 1599 independent reflections 1214 reflections with I > 2σ(I) R int = 0.063

Refinement

R[F 2 > 2σ(F 2)] = 0.037 wR(F 2) = 0.101 S = 1.00 1599 reflections 143 parameters 3 restraints H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.50 e Å−3 Δρmin = −0.71 e Å−3 Data collection: APEX2 (Bruker, 2006 ▶); cell refinement: APEX2; data reduction: SAINT (Bruker, 2005 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 1997a ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997a ▶); molecular graphics: SHELXTL (Sheldrick, 1997b ▶) and DIAMOND (Brandenburg & Brendt, 2001 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536807066792/pk2074sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536807066792/pk2074Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Rb(C6H3N2O5)(H2O)]F000 = 560
Mr = 286.59Dx = 2.109 Mg m3
Monoclinic, P21/cMo Kα radiation λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 1599 reflections
a = 5.8519 (18) Åθ = 2.0–25.1º
b = 20.846 (7) ŵ = 5.50 mm1
c = 7.412 (2) ÅT = 293 (2) K
β = 93.148 (5)ºBlock, yellow
V = 902.8 (5) Å30.40 × 0.35 × 0.30 mm
Z = 4
Bruker APEXII CCD area-detector diffractometer1599 independent reflections
Radiation source: fine-focus sealed tube1214 reflections with I > 2σ(I)
Monochromator: graphiteRint = 0.063
T = 293(2) Kθmax = 25.1º
φ and ω scansθmin = 2.0º
Absorption correction: multi-scan(SADABS; Sheldrick, 1996)h = −6→6
Tmin = 0.125, Tmax = 0.202k = −20→24
4449 measured reflectionsl = −7→8
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.037H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.101  w = 1/[σ2(Fo2) + (0.0556P)2 + 0.12P] where P = (Fo2 + 2Fc2)/3
S = 1.00(Δ/σ)max = 0.002
1599 reflectionsΔρmax = 0.50 e Å3
143 parametersΔρmin = −0.71 e Å3
3 restraintsExtinction correction: SHELXL97 (Sheldrick, 1997a), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.0120 (18)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Rb10.18947 (8)1.00955 (2)0.24241 (6)0.0381 (2)
O1−0.0671 (5)0.91314 (15)0.4428 (4)0.0404 (8)
O20.3775 (6)0.93503 (16)0.5483 (5)0.0580 (11)
O30.5150 (5)0.86504 (16)0.7365 (4)0.0456 (9)
O40.3512 (6)0.64498 (16)0.6287 (5)0.0537 (10)
O50.0559 (6)0.61696 (16)0.4603 (5)0.0562 (10)
O60.3268 (7)1.03788 (18)−0.1415 (5)0.0526 (9)
H6A0.382 (10)1.0686 (17)−0.086 (6)0.079*
H6B0.281 (10)1.053 (2)−0.239 (4)0.079*
N10.3753 (6)0.88137 (18)0.6150 (5)0.0331 (9)
N20.1790 (7)0.65827 (18)0.5345 (5)0.0373 (9)
C1−0.0063 (7)0.8557 (2)0.4619 (5)0.0290 (10)
C20.2080 (7)0.8349 (2)0.5482 (5)0.0261 (10)
C30.2641 (7)0.7709 (2)0.5735 (5)0.0269 (10)
H30.40190.75940.63330.032*
C40.1145 (7)0.7246 (2)0.5096 (5)0.0289 (10)
C5−0.0968 (7)0.7407 (2)0.4243 (6)0.0346 (11)
H5−0.19730.70880.38300.042*
C6−0.1537 (7)0.8033 (2)0.4023 (6)0.0357 (11)
H6−0.29520.81310.34580.043*
U11U22U33U12U13U23
Rb10.0429 (3)0.0320 (4)0.0387 (3)−0.0036 (2)−0.0061 (2)0.00384 (19)
O10.0411 (18)0.029 (2)0.050 (2)0.0061 (15)−0.0026 (16)0.0050 (15)
O20.069 (2)0.030 (2)0.071 (3)−0.0178 (18)−0.032 (2)0.0149 (18)
O30.0428 (19)0.038 (2)0.054 (2)−0.0031 (15)−0.0188 (17)0.0056 (16)
O40.067 (2)0.031 (2)0.061 (3)0.0131 (17)−0.016 (2)0.0011 (17)
O50.067 (2)0.028 (2)0.073 (3)−0.0102 (18)−0.003 (2)−0.0112 (18)
O60.054 (2)0.050 (2)0.053 (2)−0.005 (2)−0.0014 (19)0.0058 (19)
N10.032 (2)0.031 (2)0.036 (2)−0.0009 (17)−0.0042 (17)0.0016 (17)
N20.049 (2)0.026 (2)0.038 (2)−0.0007 (18)0.0042 (19)−0.0026 (17)
C10.029 (2)0.030 (3)0.028 (3)0.0015 (19)0.0013 (19)0.0044 (19)
C20.026 (2)0.023 (2)0.029 (2)−0.0053 (17)−0.0047 (18)−0.0001 (17)
C30.027 (2)0.031 (3)0.022 (2)0.0001 (19)−0.0010 (18)0.0022 (18)
C40.036 (2)0.023 (2)0.027 (2)0.000 (2)0.0044 (18)−0.0015 (18)
C50.035 (2)0.035 (3)0.034 (3)−0.006 (2)−0.001 (2)−0.003 (2)
C60.027 (2)0.045 (3)0.035 (3)0.001 (2)−0.0053 (19)−0.005 (2)
Rb1—O22.914 (3)O4—Rb1vii3.474 (4)
Rb1—O1i2.956 (3)O5—N21.232 (5)
Rb1—O12.957 (3)O5—Rb1viii3.016 (3)
Rb1—O5ii3.016 (3)O5—Rb1vii3.429 (4)
Rb1—O63.057 (4)O6—Rb1iv3.127 (4)
Rb1—O2iii3.119 (3)O6—Rb1v3.228 (4)
Rb1—O6iv3.127 (4)O6—H6A0.818 (10)
Rb1—O3iii3.134 (3)O6—H6B0.820 (10)
Rb1—O6v3.228 (4)N1—C21.446 (5)
Rb1—O5vi3.429 (4)N1—Rb1iii3.533 (4)
Rb1—O4vi3.474 (4)N2—C41.443 (5)
Rb1—N1iii3.533 (4)C1—C21.443 (5)
Rb1—H6A3.00 (5)C1—C61.446 (6)
O1—C11.255 (5)C2—C31.384 (6)
O1—Rb1i2.956 (3)C3—C41.369 (6)
O2—N11.223 (5)C3—H30.9300
O2—Rb1iii3.119 (3)C4—C51.398 (6)
O3—N11.231 (4)C5—C61.353 (6)
O3—Rb1iii3.134 (3)C5—H50.9300
O4—N21.226 (5)C6—H60.9300
O2—Rb1—O1i76.94 (10)O6v—Rb1—N1iii156.48 (9)
O2—Rb1—O155.06 (9)O5vi—Rb1—N1iii144.49 (9)
O1i—Rb1—O179.77 (10)O4vi—Rb1—N1iii117.89 (9)
O2—Rb1—O5ii158.84 (11)O2—Rb1—H6A135.0 (11)
O1i—Rb1—O5ii81.90 (10)O1i—Rb1—H6A122.3 (6)
O1—Rb1—O5ii120.93 (10)O1—Rb1—H6A155.4 (2)
O2—Rb1—O6136.06 (12)O5ii—Rb1—H6A58.7 (11)
O1i—Rb1—O6135.80 (9)O6—Rb1—H6A15.5 (2)
O1—Rb1—O6139.96 (10)O2iii—Rb1—H6A85.5 (6)
O5ii—Rb1—O662.29 (11)O6iv—Rb1—H6A63.4 (11)
O2—Rb1—O2iii63.18 (11)O3iii—Rb1—H6A57.8 (2)
O1i—Rb1—O2iii68.35 (10)O6v—Rb1—H6A109.0 (8)
O1—Rb1—O2iii115.03 (9)O5vi—Rb1—H6A84.5 (3)
O5ii—Rb1—O2iii108.92 (10)O4vi—Rb1—H6A93.7 (8)
O6—Rb1—O2iii98.24 (10)N1iii—Rb1—H6A71.5 (4)
O2—Rb1—O6iv73.11 (11)C1—O1—Rb1i120.7 (3)
O1i—Rb1—O6iv128.52 (9)C1—O1—Rb1123.8 (3)
O1—Rb1—O6iv113.35 (9)Rb1i—O1—Rb1100.23 (10)
O5ii—Rb1—O6iv121.87 (11)N1—O2—Rb1142.2 (3)
O6—Rb1—O6iv63.31 (11)N1—O2—Rb1iii99.5 (2)
O2iii—Rb1—O6iv60.97 (10)Rb1—O2—Rb1iii116.82 (11)
O2—Rb1—O3iii102.84 (9)N1—O3—Rb1iii98.5 (2)
O1i—Rb1—O3iii70.30 (9)N2—O4—Rb1vii97.0 (3)
O1—Rb1—O3iii146.73 (9)N2—O5—Rb1viii172.5 (3)
O5ii—Rb1—O3iii69.62 (9)N2—O5—Rb1vii99.1 (3)
O6—Rb1—O3iii73.29 (9)Rb1viii—O5—Rb1vii79.58 (8)
O2iii—Rb1—O3iii40.11 (8)Rb1—O6—Rb1iv116.69 (11)
O6iv—Rb1—O3iii76.78 (9)Rb1—O6—Rb1v82.29 (9)
O2—Rb1—O6v109.00 (9)Rb1iv—O6—Rb1v134.09 (13)
O1i—Rb1—O6v94.91 (10)Rb1—O6—H6A78 (4)
O1—Rb1—O6v54.09 (9)Rb1iv—O6—H6A92 (4)
O5ii—Rb1—O6v72.43 (10)Rb1v—O6—H6A134 (4)
O6—Rb1—O6v97.71 (9)Rb1—O6—H6B144 (4)
O2iii—Rb1—O6v162.41 (11)Rb1iv—O6—H6B100 (4)
O6iv—Rb1—O6v134.09 (13)Rb1v—O6—H6B70 (4)
O3iii—Rb1—O6v140.73 (9)H6A—O6—H6B104.1 (17)
O2—Rb1—O5vi97.36 (9)O2—N1—O3121.8 (4)
O1i—Rb1—O5vi147.52 (9)O2—N1—C2119.8 (3)
O1—Rb1—O5vi71.24 (9)O3—N1—C2118.4 (4)
O5ii—Rb1—O5vi100.42 (8)O2—N1—Rb1iii60.6 (2)
O6—Rb1—O5vi69.13 (9)O3—N1—Rb1iii61.3 (2)
O2iii—Rb1—O5vi137.72 (10)C2—N1—Rb1iii176.1 (3)
O6iv—Rb1—O5vi77.88 (10)O4—N2—O5122.6 (4)
O3iii—Rb1—O5vi141.14 (9)O4—N2—C4119.4 (4)
O6v—Rb1—O5vi56.22 (10)O5—N2—C4118.1 (4)
O2—Rb1—O4vi66.31 (9)O1—C1—C2124.8 (4)
O1i—Rb1—O4vi141.08 (9)O1—C1—C6121.7 (4)
O1—Rb1—O4vi69.16 (9)C2—C1—C6113.4 (4)
O5ii—Rb1—O4vi134.11 (9)C3—C2—C1123.0 (4)
O6—Rb1—O4vi82.20 (10)C3—C2—N1116.7 (3)
O2iii—Rb1—O4vi103.85 (9)C1—C2—N1120.4 (4)
O6iv—Rb1—O4vi52.17 (9)C4—C3—C2119.3 (4)
O3iii—Rb1—O4vi128.95 (9)C4—C3—H3120.3
O6v—Rb1—O4vi85.63 (9)C2—C3—H3120.3
O5vi—Rb1—O4vi36.39 (8)C3—C4—C5121.3 (4)
O2—Rb1—N1iii82.82 (9)C3—C4—N2118.2 (4)
O1i—Rb1—N1iii67.35 (9)C5—C4—N2120.5 (4)
O1—Rb1—N1iii131.67 (9)C6—C5—C4119.5 (4)
O5ii—Rb1—N1iii89.25 (10)C6—C5—H5120.3
O6—Rb1—N1iii86.10 (9)C4—C5—H5120.3
O2iii—Rb1—N1iii19.97 (8)C5—C6—C1123.5 (4)
O6iv—Rb1—N1iii68.15 (9)C5—C6—H6118.2
O3iii—Rb1—N1iii20.16 (8)C1—C6—H6118.2
O2—Rb1—O1—C1−57.1 (3)O6v—Rb1—O6—Rb1iv−135.87 (16)
O1i—Rb1—O1—C1−138.2 (4)O5vi—Rb1—O6—Rb1iv−86.57 (13)
O5ii—Rb1—O1—C1147.8 (3)O4vi—Rb1—O6—Rb1iv−51.39 (12)
O6—Rb1—O1—C165.2 (4)N1iii—Rb1—O6—Rb1iv67.47 (12)
O2iii—Rb1—O1—C1−78.1 (3)O2—Rb1—O6—Rb1v127.89 (11)
O6iv—Rb1—O1—C1−10.5 (3)O1i—Rb1—O6—Rb1v−105.25 (12)
O3iii—Rb1—O1—C1−112.3 (3)O1—Rb1—O6—Rb1v40.64 (17)
O6v—Rb1—O1—C1118.0 (4)O5ii—Rb1—O6—Rb1v−65.46 (10)
O5vi—Rb1—O1—C156.7 (3)O2iii—Rb1—O6—Rb1v−172.56 (9)
O4vi—Rb1—O1—C118.0 (3)O6iv—Rb1—O6—Rb1v135.87 (16)
N1iii—Rb1—O1—C1−91.4 (3)O3iii—Rb1—O6—Rb1v−140.81 (10)
O2—Rb1—O1—Rb1i81.14 (12)O6v—Rb1—O6—Rb1v0.0
O1i—Rb1—O1—Rb1i0.0O5vi—Rb1—O6—Rb1v49.30 (8)
O5ii—Rb1—O1—Rb1i−74.03 (13)O4vi—Rb1—O6—Rb1v84.48 (8)
O6—Rb1—O1—Rb1i−156.60 (12)N1iii—Rb1—O6—Rb1v−156.66 (9)
O2iii—Rb1—O1—Rb1i60.13 (12)Rb1—O2—N1—O3167.0 (4)
O6iv—Rb1—O1—Rb1i127.69 (9)Rb1iii—O2—N1—O33.2 (5)
O3iii—Rb1—O1—Rb1i25.93 (19)Rb1—O2—N1—C2−11.7 (7)
O6v—Rb1—O1—Rb1i−103.77 (13)Rb1iii—O2—N1—C2−175.5 (3)
O5vi—Rb1—O1—Rb1i−165.14 (11)Rb1—O2—N1—Rb1iii163.8 (6)
O4vi—Rb1—O1—Rb1i156.16 (11)Rb1iii—O3—N1—O2−3.2 (5)
N1iii—Rb1—O1—Rb1i46.81 (14)Rb1iii—O3—N1—C2175.5 (3)
O1i—Rb1—O2—N1125.8 (5)Rb1vii—O4—N2—O5−23.8 (5)
O1—Rb1—O2—N139.3 (5)Rb1vii—O4—N2—C4155.5 (3)
O5ii—Rb1—O2—N1125.4 (5)Rb1vii—O5—N2—O424.3 (5)
O6—Rb1—O2—N1−89.1 (5)Rb1vii—O5—N2—C4−155.1 (3)
O2iii—Rb1—O2—N1−162.0 (6)Rb1i—O1—C1—C2−70.6 (5)
O6iv—Rb1—O2—N1−96.5 (5)Rb1—O1—C1—C259.7 (5)
O3iii—Rb1—O2—N1−168.2 (5)Rb1i—O1—C1—C6107.4 (4)
O6v—Rb1—O2—N135.1 (5)Rb1—O1—C1—C6−122.3 (4)
O5vi—Rb1—O2—N1−21.6 (5)O1—C1—C2—C3177.1 (4)
O4vi—Rb1—O2—N1−41.1 (5)C6—C1—C2—C3−1.0 (6)
N1iii—Rb1—O2—N1−165.8 (5)O1—C1—C2—N1−2.2 (7)
O1i—Rb1—O2—Rb1iii−72.12 (14)C6—C1—C2—N1179.7 (4)
O1—Rb1—O2—Rb1iii−158.66 (19)O2—N1—C2—C3155.4 (4)
O5ii—Rb1—O2—Rb1iii−72.6 (3)O3—N1—C2—C3−23.3 (6)
O6—Rb1—O2—Rb1iii72.95 (19)O2—N1—C2—C1−25.2 (6)
O2iii—Rb1—O2—Rb1iii0.0O3—N1—C2—C1156.0 (4)
O6iv—Rb1—O2—Rb1iii65.50 (14)C1—C2—C3—C42.1 (7)
O3iii—Rb1—O2—Rb1iii−6.18 (17)N1—C2—C3—C4−178.6 (4)
O6v—Rb1—O2—Rb1iii−162.86 (13)C2—C3—C4—C5−2.0 (6)
O5vi—Rb1—O2—Rb1iii140.40 (14)C2—C3—C4—N2178.8 (4)
O4vi—Rb1—O2—Rb1iii120.98 (17)O4—N2—C4—C38.2 (6)
N1iii—Rb1—O2—Rb1iii−3.78 (13)O5—N2—C4—C3−172.4 (4)
O2—Rb1—O6—Rb1iv−8.0 (2)O4—N2—C4—C5−171.0 (4)
O1i—Rb1—O6—Rb1iv118.88 (14)O5—N2—C4—C58.3 (7)
O1—Rb1—O6—Rb1iv−95.23 (16)C3—C4—C5—C60.8 (7)
O5ii—Rb1—O6—Rb1iv158.67 (17)N2—C4—C5—C6−180.0 (4)
O2iii—Rb1—O6—Rb1iv51.57 (14)C4—C5—C6—C10.3 (7)
O6iv—Rb1—O6—Rb1iv0.0O1—C1—C6—C5−178.4 (4)
O3iii—Rb1—O6—Rb1iv83.33 (12)C2—C1—C6—C5−0.2 (6)
D—H···AD—HH···AD···AD—H···A
O6—H6B···O1v0.820 (10)2.03 (2)2.822 (5)161 (6)
O6—H6A···O4ix0.818 (10)2.27 (4)2.919 (5)137 (5)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O6—H6B⋯O1i0.820 (10)2.03 (2)2.822 (5)161 (6)
O6—H6A⋯O4ii0.818 (10)2.27 (4)2.919 (5)137 (5)

Symmetry codes: (i) ; (ii) .

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3.  Solid-state synthesis and characterization of novel aluminophosphates, A3Al2P3O12 (A = Na, K, Rb, Tl): influence of A+ ions on the coordination of aluminum.

Authors:  R N Devi; K Vidyasagar
Journal:  Inorg Chem       Date:  2000-05-29       Impact factor: 5.165

  3 in total
  1 in total

1.  catena-Poly[[diaqua-rubidium(I)](μ(2)-3-carboxy-pyrazine-2-carboxyl-ato)(μ(2)-pyrazine-2,3-dicarboxylic acid)].

Authors:  Mustafa Tombul; Kutalmis Guven
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-01-23
  1 in total

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