| Literature DB >> 21200515 |
Wan Xing Wei, Wen-Jie Feng, Bo-Jiöng Zheng, Ying Chen, Zhi-Min Jin.
Abstract
The title compound, (C(11)H(14)N(4)O(4))[SbCl(4)]·H(2)O, comprises a protonated doxofyllinium cation [7-(1,3-dioxolan-2-ylmeth-yl)-1,3-dimethyl-2,6-dioxo-3,7-dihydro-1H-purin-9-ium], an [SbCl(4)](-) anion and a water mol-ecule linked by N-H⋯O and O-H⋯Cl hydrogen bonds: the [SbCl(4)](-) anions form centrosymmetric dimers via weak Sb⋯Cl inter-actions [Sb⋯Cl = 3.1159 (9) Å]. The geometrical arrangement in the crystal structure is characterized by slipped π-π stacking of the parallel purine ring systems, with an inter-planar separation of 3.32 Å.Entities:
Year: 2007 PMID: 21200515 PMCID: PMC2915103 DOI: 10.1107/S1600536807065774
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| (C11H14N4O4)[SbCl4]·H2O | |
| Triclinic, | |
| Hall symbol: -P 1 | Mo |
| Cell parameters from 4733 reflections | |
| θ = 2.1–26.9º | |
| µ = 2.03 mm−1 | |
| α = 68.7550 (10)º | |
| β = 82.671 (2)º | Block, colourless |
| γ = 88.228 (2)º | 0.33 × 0.28 × 0.27 mm |
| Bruker APEX diffractometer | 4399 independent reflections |
| Radiation source: fine-focus sealed tube | 4151 reflections with |
| Monochromator: graphite | |
| θmax = 27.5º | |
| φ and ω scan | θmin = 3.1º |
| Absorption correction: multi-scan(SADABS; Bruker, 2000) | |
| 9490 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H atoms treated by a mixture of independent and constrained refinement | |
| | |
| (Δ/σ)max = 0.001 | |
| 4399 reflections | Δρmax = 1.40 e Å−3 |
| 236 parameters | Δρmin = −2.97 e Å−3 |
| 3 restraints | Extinction correction: none |
| Primary atom site location: structure-invariant direct methods |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Sb1 | 0.603006 (19) | 0.947081 (18) | 0.845084 (16) | 0.01708 (9) | |
| Cl1 | 0.50253 (10) | 0.84549 (9) | 0.69342 (9) | 0.03132 (19) | |
| Cl2 | 0.85111 (8) | 0.95551 (8) | 0.72752 (7) | 0.02636 (17) | |
| Cl3 | 0.70926 (9) | 1.07637 (8) | 0.98807 (8) | 0.02720 (17) | |
| Cl4 | 0.53886 (10) | 1.16845 (8) | 0.70074 (8) | 0.02833 (18) | |
| O3 | 0.7285 (2) | 0.7066 (2) | 0.0265 (2) | 0.0210 (4) | |
| N4 | 1.0810 (3) | 0.6651 (3) | 0.4722 (2) | 0.0167 (5) | |
| N3 | 1.2424 (3) | 0.5255 (2) | 0.3864 (2) | 0.0162 (5) | |
| C11 | 1.1991 (3) | 0.5734 (3) | 0.4877 (3) | 0.0173 (5) | |
| C8 | 1.0212 (3) | 0.7064 (3) | 0.3567 (3) | 0.0153 (5) | |
| C1 | 1.1882 (3) | 0.5670 (3) | 0.2638 (3) | 0.0153 (5) | |
| C2 | 1.0676 (3) | 0.6614 (3) | 0.2569 (3) | 0.0149 (5) | |
| O1 | 1.2388 (2) | 0.5233 (2) | 0.1794 (2) | 0.0226 (5) | |
| N1 | 0.9061 (3) | 0.7955 (3) | 0.3204 (2) | 0.0182 (5) | |
| N2 | 0.9814 (3) | 0.7279 (3) | 0.1570 (2) | 0.0164 (5) | |
| O2 | 1.2588 (2) | 0.5340 (2) | 0.5875 (2) | 0.0247 (5) | |
| C7 | 0.8856 (3) | 0.8068 (3) | 0.1984 (3) | 0.0199 (6) | |
| H7 | 0.8145 | 0.8619 | 0.1501 | 0.024* | |
| C12 | 1.3671 (3) | 0.4282 (3) | 0.4072 (3) | 0.0233 (6) | |
| H12A | 1.3891 | 0.4014 | 0.3325 | 0.035* | |
| H12B | 1.3390 | 0.3488 | 0.4840 | 0.035* | |
| H12C | 1.4544 | 0.4711 | 0.4188 | 0.035* | |
| O4 | 0.8543 (2) | 0.5081 (2) | 0.1080 (2) | 0.0221 (4) | |
| C3 | 0.9963 (3) | 0.7182 (3) | 0.0266 (3) | 0.0186 (6) | |
| H3A | 1.0894 | 0.6729 | 0.0131 | 0.022* | |
| H3B | 1.0012 | 0.8097 | −0.0395 | 0.022* | |
| C4 | 0.8666 (3) | 0.6396 (3) | 0.0103 (3) | 0.0170 (5) | |
| H4 | 0.8816 | 0.6326 | −0.0766 | 0.020* | |
| C5 | 0.6971 (4) | 0.4720 (3) | 0.1295 (3) | 0.0254 (6) | |
| H5A | 0.6695 | 0.4048 | 0.2166 | 0.030* | |
| H5B | 0.6713 | 0.4361 | 0.0652 | 0.030* | |
| C6 | 0.6219 (4) | 0.6067 (4) | 0.1140 (4) | 0.0362 (8) | |
| H6A | 0.5284 | 0.6123 | 0.0770 | 0.043* | |
| H6B | 0.6014 | 0.6188 | 0.1975 | 0.043* | |
| C10 | 1.0375 (4) | 0.7258 (3) | 0.5723 (3) | 0.0230 (6) | |
| H10A | 1.0918 | 0.6828 | 0.6458 | 0.035* | |
| H10B | 0.9316 | 0.7121 | 0.6004 | 0.035* | |
| H10C | 1.0607 | 0.8222 | 0.5359 | 0.035* | |
| O5 | 0.7621 (3) | 0.9581 (3) | 0.4328 (2) | 0.0308 (5) | |
| H1 | 0.857 (4) | 0.845 (4) | 0.367 (4) | 0.024 (9)* | |
| H5C | 0.731 (4) | 0.907 (3) | 0.5067 (18) | 0.029* | |
| H5D | 0.699 (3) | 1.004 (3) | 0.390 (3) | 0.029* |
| Sb1 | 0.01524 (12) | 0.01761 (13) | 0.01647 (12) | 0.00463 (8) | −0.00456 (8) | −0.00337 (9) |
| Cl1 | 0.0308 (4) | 0.0267 (4) | 0.0434 (5) | 0.0035 (3) | −0.0099 (3) | −0.0195 (4) |
| Cl2 | 0.0185 (3) | 0.0339 (4) | 0.0231 (3) | 0.0024 (3) | −0.0001 (3) | −0.0070 (3) |
| Cl3 | 0.0209 (4) | 0.0285 (4) | 0.0289 (4) | −0.0004 (3) | −0.0088 (3) | −0.0045 (3) |
| Cl4 | 0.0357 (4) | 0.0188 (4) | 0.0285 (4) | 0.0071 (3) | −0.0144 (3) | −0.0031 (3) |
| O3 | 0.0136 (9) | 0.0262 (11) | 0.0211 (10) | 0.0040 (8) | −0.0060 (8) | −0.0051 (9) |
| N4 | 0.0172 (11) | 0.0215 (12) | 0.0123 (10) | 0.0048 (9) | −0.0057 (9) | −0.0063 (9) |
| N3 | 0.0149 (11) | 0.0191 (12) | 0.0146 (10) | 0.0056 (9) | −0.0061 (9) | −0.0052 (9) |
| C11 | 0.0158 (12) | 0.0212 (14) | 0.0148 (12) | 0.0024 (10) | −0.0044 (10) | −0.0057 (11) |
| C8 | 0.0141 (12) | 0.0180 (13) | 0.0141 (12) | 0.0029 (10) | −0.0055 (10) | −0.0050 (10) |
| C1 | 0.0124 (12) | 0.0190 (13) | 0.0140 (12) | −0.0004 (10) | −0.0038 (10) | −0.0048 (11) |
| C2 | 0.0133 (12) | 0.0200 (13) | 0.0115 (11) | 0.0023 (10) | −0.0060 (9) | −0.0042 (10) |
| O1 | 0.0219 (11) | 0.0312 (12) | 0.0189 (10) | 0.0091 (9) | −0.0056 (8) | −0.0139 (9) |
| N1 | 0.0171 (11) | 0.0205 (12) | 0.0188 (11) | 0.0067 (9) | −0.0069 (9) | −0.0082 (10) |
| N2 | 0.0151 (11) | 0.0206 (12) | 0.0137 (10) | 0.0026 (9) | −0.0075 (9) | −0.0047 (9) |
| O2 | 0.0234 (11) | 0.0353 (13) | 0.0155 (9) | 0.0084 (9) | −0.0107 (8) | −0.0070 (9) |
| C7 | 0.0168 (13) | 0.0237 (15) | 0.0215 (13) | 0.0053 (11) | −0.0084 (11) | −0.0093 (12) |
| C12 | 0.0209 (14) | 0.0281 (16) | 0.0201 (13) | 0.0135 (12) | −0.0081 (11) | −0.0068 (12) |
| O4 | 0.0227 (11) | 0.0215 (11) | 0.0203 (10) | 0.0024 (8) | −0.0035 (8) | −0.0052 (9) |
| C3 | 0.0171 (13) | 0.0276 (15) | 0.0117 (12) | 0.0020 (11) | −0.0046 (10) | −0.0071 (11) |
| C4 | 0.0154 (13) | 0.0218 (14) | 0.0149 (12) | 0.0049 (11) | −0.0056 (10) | −0.0071 (11) |
| C5 | 0.0277 (16) | 0.0304 (17) | 0.0179 (13) | −0.0070 (13) | 0.0006 (12) | −0.0091 (13) |
| C6 | 0.0223 (16) | 0.037 (2) | 0.0401 (19) | −0.0003 (14) | −0.0018 (14) | −0.0035 (16) |
| C10 | 0.0269 (15) | 0.0301 (17) | 0.0159 (13) | 0.0065 (12) | −0.0065 (11) | −0.0122 (12) |
| O5 | 0.0291 (12) | 0.0417 (15) | 0.0262 (11) | 0.0164 (11) | −0.0078 (9) | −0.0176 (11) |
| Sb1—Cl4 | 2.3915 (7) | N2—C3 | 1.468 (3) |
| Sb1—Cl2 | 2.4176 (7) | C7—H7 | 0.9300 |
| Sb1—Cl1 | 2.5460 (9) | C12—H12A | 0.9600 |
| Sb1—Cl3 | 2.6917 (9) | C12—H12B | 0.9600 |
| O3—C6 | 1.428 (4) | C12—H12C | 0.9600 |
| O3—C4 | 1.429 (3) | O4—C4 | 1.405 (3) |
| N4—C8 | 1.364 (3) | O4—C5 | 1.440 (4) |
| N4—C11 | 1.392 (3) | C3—C4 | 1.512 (4) |
| N4—C10 | 1.470 (4) | C3—H3A | 0.9700 |
| N3—C11 | 1.392 (4) | C3—H3B | 0.9700 |
| N3—C1 | 1.409 (3) | C4—H4 | 0.9800 |
| N3—C12 | 1.473 (3) | C5—C6 | 1.507 (5) |
| C11—O2 | 1.216 (4) | C5—H5A | 0.9700 |
| C8—C2 | 1.362 (4) | C5—H5B | 0.9700 |
| C8—N1 | 1.369 (3) | C6—H6A | 0.9700 |
| C1—O1 | 1.213 (3) | C6—H6B | 0.9700 |
| C1—C2 | 1.434 (4) | C10—H10A | 0.9600 |
| C2—N2 | 1.388 (3) | C10—H10B | 0.9600 |
| N1—C7 | 1.344 (4) | C10—H10C | 0.9600 |
| N1—H1 | 0.92 (4) | O5—H5C | 0.81 (3) |
| N2—C7 | 1.327 (4) | O5—H5D | 0.81 (3) |
| Cl4—Sb1—Cl2 | 93.49 (3) | H12A—C12—H12B | 109.5 |
| Cl4—Sb1—Cl1 | 88.23 (3) | N3—C12—H12C | 109.5 |
| Cl2—Sb1—Cl1 | 88.95 (3) | H12A—C12—H12C | 109.5 |
| Cl4—Sb1—Cl3 | 86.84 (3) | H12B—C12—H12C | 109.5 |
| Cl2—Sb1—Cl3 | 90.02 (3) | C4—O4—C5 | 105.2 (2) |
| Cl1—Sb1—Cl3 | 174.90 (3) | N2—C3—C4 | 112.1 (2) |
| C6—O3—C4 | 108.5 (2) | N2—C3—H3A | 109.2 |
| C8—N4—C11 | 117.8 (2) | C4—C3—H3A | 109.2 |
| C8—N4—C10 | 122.3 (2) | N2—C3—H3B | 109.2 |
| C11—N4—C10 | 119.4 (2) | C4—C3—H3B | 109.2 |
| C11—N3—C1 | 127.4 (2) | H3A—C3—H3B | 107.9 |
| C11—N3—C12 | 115.5 (2) | O4—C4—O3 | 106.6 (2) |
| C1—N3—C12 | 116.9 (2) | O4—C4—C3 | 110.1 (2) |
| O2—C11—N3 | 121.5 (3) | O3—C4—C3 | 110.1 (2) |
| O2—C11—N4 | 121.2 (3) | O4—C4—H4 | 110.0 |
| N3—C11—N4 | 117.3 (2) | O3—C4—H4 | 110.0 |
| C2—C8—N4 | 124.1 (2) | C3—C4—H4 | 110.0 |
| C2—C8—N1 | 108.2 (2) | O4—C5—C6 | 102.8 (3) |
| N4—C8—N1 | 127.7 (2) | O4—C5—H5A | 111.2 |
| O1—C1—N3 | 122.2 (2) | C6—C5—H5A | 111.2 |
| O1—C1—C2 | 126.7 (3) | O4—C5—H5B | 111.2 |
| N3—C1—C2 | 111.1 (2) | C6—C5—H5B | 111.2 |
| C8—C2—N2 | 106.7 (2) | H5A—C5—H5B | 109.1 |
| C8—C2—C1 | 122.1 (2) | O3—C6—C5 | 103.9 (3) |
| N2—C2—C1 | 131.2 (2) | O3—C6—H6A | 111.0 |
| C7—N1—C8 | 107.2 (2) | C5—C6—H6A | 111.0 |
| C7—N1—H1 | 125 (2) | O3—C6—H6B | 111.0 |
| C8—N1—H1 | 127 (2) | C5—C6—H6B | 111.0 |
| C7—N2—C2 | 107.7 (2) | H6A—C6—H6B | 109.0 |
| C7—N2—C3 | 125.6 (2) | N4—C10—H10A | 109.5 |
| C2—N2—C3 | 126.7 (2) | N4—C10—H10B | 109.5 |
| N2—C7—N1 | 110.1 (2) | H10A—C10—H10B | 109.5 |
| N2—C7—H7 | 125.0 | N4—C10—H10C | 109.5 |
| N1—C7—H7 | 125.0 | H10A—C10—H10C | 109.5 |
| N3—C12—H12A | 109.5 | H10B—C10—H10C | 109.5 |
| N3—C12—H12B | 109.5 | H5C—O5—H5D | 116.0 (19) |
| C1—N3—C11—O2 | −176.7 (3) | O1—C1—C2—N2 | −1.4 (5) |
| C12—N3—C11—O2 | −1.7 (4) | N3—C1—C2—N2 | −180.0 (3) |
| C1—N3—C11—N4 | 5.3 (4) | C2—C8—N1—C7 | −1.4 (3) |
| C12—N3—C11—N4 | −179.7 (3) | N4—C8—N1—C7 | 179.5 (3) |
| C8—N4—C11—O2 | 179.0 (3) | C8—C2—N2—C7 | −1.3 (3) |
| C10—N4—C11—O2 | 6.1 (4) | C1—C2—N2—C7 | −178.8 (3) |
| C8—N4—C11—N3 | −3.1 (4) | C8—C2—N2—C3 | 176.4 (3) |
| C10—N4—C11—N3 | −175.9 (3) | C1—C2—N2—C3 | −1.1 (5) |
| C11—N4—C8—C2 | 1.4 (4) | C2—N2—C7—N1 | 0.5 (3) |
| C10—N4—C8—C2 | 174.1 (3) | C3—N2—C7—N1 | −177.3 (3) |
| C11—N4—C8—N1 | −179.7 (3) | C8—N1—C7—N2 | 0.6 (3) |
| C10—N4—C8—N1 | −7.0 (5) | C7—N2—C3—C4 | −73.4 (4) |
| C11—N3—C1—O1 | 176.4 (3) | C2—N2—C3—C4 | 109.3 (3) |
| C12—N3—C1—O1 | 1.4 (4) | C5—O4—C4—O3 | 31.0 (3) |
| C11—N3—C1—C2 | −5.0 (4) | C5—O4—C4—C3 | 150.4 (2) |
| C12—N3—C1—C2 | −180.0 (3) | C6—O3—C4—O4 | −12.6 (3) |
| N4—C8—C2—N2 | −179.2 (3) | C6—O3—C4—C3 | −132.0 (3) |
| N1—C8—C2—N2 | 1.7 (3) | N2—C3—C4—O4 | −56.9 (3) |
| N4—C8—C2—C1 | −1.4 (5) | N2—C3—C4—O3 | 60.4 (3) |
| N1—C8—C2—C1 | 179.5 (3) | C4—O4—C5—C6 | −36.3 (3) |
| O1—C1—C2—C8 | −178.6 (3) | C4—O3—C6—C5 | −9.9 (4) |
| N3—C1—C2—C8 | 2.9 (4) | O4—C5—C6—O3 | 28.0 (3) |
| H··· | ||||
| N1—H1···O5 | 0.92 (4) | 1.75 (4) | 2.663 (4) | 172 (4) |
| O5—H5C···Cl1 | 0.81 (3) | 2.65 (2) | 3.332 (3) | 142 (2) |
| O5—H5D···Cl1i | 0.81 (3) | 2.41 (2) | 3.205 (3) | 166 (5) |
| C3—H3A···O1 | 0.97 | 2.45 | 3.145 (8) | 128 |
| C7—H7···Cl3ii | 0.93 | 2.56 | 3.432 (3) | 157 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N1—H1⋯O5 | 0.92 (4) | 1.75 (4) | 2.663 (4) | 172 (4) |
| O5—H5 | 0.81 (3) | 2.65 (2) | 3.332 (3) | 142 (2) |
| O5—H5 | 0.81 (3) | 2.41 (2) | 3.205 (3) | 166 (5) |
| C3—H3 | 0.97 | 2.45 | 3.145 (8) | 128 |
| C7—H7⋯Cl3ii | 0.93 | 2.56 | 3.432 (3) | 157 |
Symmetry codes: (i) ; (ii) .