Literature DB >> 21200470

catena-Poly[[silver(I)-μ-N-(3-pyridyl-meth-yl)pyridine-4-carboxamide] nitrate monohydrate].

Yu-Tao Ma1, Qi-Hua Zhao.   

Abstract

In the title compound, {[Ag(C(12)H(11)N(3)O)]NO(3)·H(2)O}(n), the Ag atom is coordinated by two N atoms from the heterocyclic ligand, giving a linear polycationic chain. Two long Ag⋯O(nitrate) inter-actions [2.667 (3) and 2.840 (3) Å] result in a three-dimensional network. The water mol-ecule consolidates the network structure by forming hydrogen bonds, one to the polycationic chain and one to the nitrate anion.

Entities:  

Year:  2007        PMID: 21200470      PMCID: PMC2915063          DOI: 10.1107/S1600536807064744

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related literature, see: Cordes & Hanton (2007 ▶); Kumar et al. (2006 ▶); Tong et al. (2002 ▶).

Experimental

Crystal data

[Ag(C12H11N3O)]NO3·H2O M = 401.13 Monoclinic, a = 12.177 (2) Å b = 13.022 (3) Å c = 8.9109 (18) Å β = 94.21 (3)° V = 1409.2 (5) Å3 Z = 4 Mo Kα radiation μ = 1.46 mm−1 T = 293 (2) K 0.6 × 0.4 × 0.2 mm

Data collection

Rigaku Mercury CCD diffractometer Absorption correction: multi-scan (CrystalClear; Rigaku/MSC, 2003 ▶) T min = 0.503, T max = 0.742 14304 measured reflections 3230 independent reflections 2399 reflections with I > 2σ(I) R int = 0.065

Refinement

R[F 2 > 2σ(F 2)] = 0.042 wR(F 2) = 0.101 S = 1.06 3230 reflections 199 parameters H-atom parameters constrained Δρmax = 0.35 e Å−3 Δρmin = −0.43 e Å−3 Data collection: CrystalClear (Rigaku/MSC, 2003 ▶); cell refinement: CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXS97 (Sheldrick, 1997 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997 ▶); molecular graphics: SHELXTL (Sheldrick, 1999 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536807064744/pk2069sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536807064744/pk2069Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Ag(C12H11N3O)]NO3·H2OF000 = 800
Mr = 401.13Dx = 1.891 Mg m3
Monoclinic, P21/cMo Kα radiation λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 5866 reflections
a = 12.177 (2) Åθ = 3.2–27.5º
b = 13.022 (3) ŵ = 1.46 mm1
c = 8.9109 (18) ÅT = 293 (2) K
β = 94.21 (3)ºBlock, colorless
V = 1409.2 (5) Å30.6 × 0.4 × 0.2 mm
Z = 4
Rigaku Mercury CCD diffractometer3230 independent reflections
Radiation source: fine-focus sealed tube2399 reflections with I > 2σ(I)
Monochromator: graphiteRint = 0.065
T = 293(2) Kθmax = 27.5º
ω scansθmin = 3.1º
Absorption correction: multi-scan(CrystalClear; Rigaku/MSC, 2003)h = −15→15
Tmin = 0.503, Tmax = 0.742k = −16→16
14304 measured reflectionsl = −11→11
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.042H-atom parameters constrained
wR(F2) = 0.101  w = 1/[σ2(Fo2) + (0.0433P)2 + 0.2355P] where P = (Fo2 + 2Fc2)/3
S = 1.06(Δ/σ)max < 0.001
3230 reflectionsΔρmax = 0.35 e Å3
199 parametersΔρmin = −0.43 e Å3
Primary atom site location: structure-invariant direct methodsExtinction correction: none
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Ag1−0.01568 (2)0.32484 (2)0.11987 (4)0.04917 (14)
N30.1306 (2)0.3030 (2)0.0011 (3)0.0377 (7)
C90.1867 (3)0.3832 (3)−0.0444 (4)0.0453 (9)
H9A0.16440.4486−0.01760.054*
C70.2524 (3)0.1954 (3)−0.1219 (4)0.0426 (9)
H7A0.27310.1291−0.14670.051*
C80.1637 (3)0.2107 (3)−0.0387 (4)0.0448 (9)
H8A0.12490.1537−0.00870.054*
C110.3109 (3)0.2785 (3)−0.1690 (4)0.0321 (7)
C100.2755 (3)0.3746 (3)−0.1283 (4)0.0418 (9)
H10A0.31200.4331−0.15800.050*
C120.4107 (3)0.2716 (3)−0.2571 (4)0.0348 (8)
N40.4370 (2)0.1789 (2)−0.3061 (3)0.0396 (7)
H4A0.39620.1273−0.28720.047*
C130.5327 (3)0.1630 (3)−0.3904 (4)0.0444 (9)
H13A0.54310.2231−0.45200.053*
H13B0.51880.1051−0.45760.053*
C40.6375 (3)0.1431 (3)−0.2938 (4)0.0335 (8)
C50.7368 (3)0.1578 (3)−0.3533 (4)0.0358 (8)
H5A0.73650.1849−0.44990.043*
N10.8337 (2)0.1358 (2)−0.2817 (3)0.0387 (7)
C10.8340 (3)0.0972 (3)−0.1428 (4)0.0472 (9)
H1B0.90070.0798−0.09170.057*
C20.7385 (3)0.0825 (3)−0.0737 (4)0.0485 (10)
H2A0.74100.05770.02430.058*
C30.6391 (3)0.1044 (3)−0.1492 (4)0.0413 (9)
H3A0.57380.0933−0.10380.050*
O10.4653 (2)0.3480 (2)−0.2803 (3)0.0550 (8)
O2−0.0055 (2)0.1263 (3)0.1929 (4)0.0669 (8)
N2−0.0802 (3)0.0813 (3)0.2490 (3)0.0427 (7)
O3−0.1439 (3)0.1264 (3)0.3279 (4)0.0735 (9)
O1W0.6452 (2)0.4755 (2)−0.2057 (4)0.0624 (8)
H1WA0.59320.4332−0.22670.075*
H1WB0.70330.4393−0.19280.075*
O4−0.0959 (3)−0.0117 (2)0.2228 (4)0.0702 (9)
U11U22U33U12U13U23
Ag10.03123 (18)0.0563 (2)0.0621 (2)0.00455 (13)0.01775 (14)−0.00438 (15)
N30.0300 (16)0.0400 (18)0.0435 (18)0.0011 (13)0.0066 (13)−0.0052 (13)
C90.042 (2)0.034 (2)0.061 (3)0.0054 (17)0.0109 (19)−0.0029 (18)
C70.041 (2)0.033 (2)0.057 (2)−0.0023 (16)0.0209 (18)−0.0077 (16)
C80.039 (2)0.043 (2)0.055 (2)−0.0071 (17)0.0197 (18)−0.0027 (18)
C110.0277 (17)0.0366 (19)0.0319 (18)0.0012 (15)0.0013 (14)0.0008 (14)
C100.039 (2)0.035 (2)0.053 (2)−0.0021 (17)0.0105 (17)0.0004 (17)
C120.0267 (18)0.042 (2)0.0363 (19)−0.0045 (16)0.0048 (14)−0.0007 (16)
N40.0270 (15)0.0483 (19)0.0448 (18)−0.0020 (13)0.0127 (13)−0.0045 (14)
C130.032 (2)0.062 (3)0.041 (2)0.0028 (18)0.0105 (16)−0.0027 (17)
C40.0324 (19)0.0360 (18)0.0324 (18)0.0020 (15)0.0060 (15)−0.0046 (14)
C50.0305 (18)0.041 (2)0.0373 (19)0.0019 (15)0.0103 (15)0.0014 (15)
N10.0285 (16)0.0443 (17)0.0447 (18)−0.0018 (14)0.0108 (13)0.0025 (14)
C10.036 (2)0.056 (3)0.050 (2)0.0012 (18)0.0028 (17)0.0017 (19)
C20.045 (2)0.066 (3)0.036 (2)0.002 (2)0.0075 (17)0.0058 (18)
C30.037 (2)0.048 (2)0.041 (2)−0.0032 (17)0.0150 (16)−0.0004 (17)
O10.0404 (16)0.0537 (17)0.073 (2)−0.0142 (13)0.0212 (14)−0.0028 (14)
O20.055 (2)0.068 (2)0.080 (2)−0.0126 (16)0.0235 (16)0.0100 (18)
N20.0371 (18)0.050 (2)0.0413 (18)−0.0045 (15)0.0028 (14)0.0039 (15)
O30.066 (2)0.076 (2)0.082 (2)−0.0028 (18)0.0310 (18)−0.0178 (18)
O1W0.0471 (17)0.0461 (17)0.094 (2)−0.0057 (14)0.0067 (15)−0.0046 (15)
O40.068 (2)0.0443 (18)0.098 (3)−0.0020 (16)0.0053 (18)0.0006 (16)
Ag1—N1i2.152 (3)C13—H13A0.9700
Ag1—N32.157 (3)C13—H13B0.9700
N3—C81.324 (5)C4—C51.369 (5)
N3—C91.328 (5)C4—C31.382 (5)
C9—C101.363 (5)C5—N11.331 (4)
C9—H9A0.9300C5—H5A0.9300
C7—C81.369 (5)N1—C11.336 (5)
C7—C111.378 (5)N1—Ag1ii2.152 (3)
C7—H7A0.9300C1—C21.368 (5)
C8—H8A0.9300C1—H1B0.9300
C11—C101.381 (5)C2—C31.370 (5)
C11—C121.497 (5)C2—H2A0.9300
C10—H10A0.9300C3—H3A0.9300
C12—O11.222 (4)O2—N21.220 (4)
C12—N41.331 (4)N2—O31.234 (4)
N4—C131.447 (5)N2—O41.245 (4)
N4—H4A0.8600O1W—H1WA0.8499
C13—C41.508 (5)O1W—H1WB0.8500
N1i—Ag1—N3172.19 (11)C4—C13—H13A108.7
C8—N3—C9117.3 (3)N4—C13—H13B108.7
C8—N3—Ag1122.0 (2)C4—C13—H13B108.7
C9—N3—Ag1120.5 (2)H13A—C13—H13B107.6
N3—C9—C10123.3 (3)C5—C4—C3117.3 (3)
N3—C9—H9A118.3C5—C4—C13119.3 (3)
C10—C9—H9A118.3C3—C4—C13123.3 (3)
C8—C7—C11119.8 (3)N1—C5—C4124.2 (3)
C8—C7—H7A120.1N1—C5—H5A117.9
C11—C7—H7A120.1C4—C5—H5A117.9
N3—C8—C7123.0 (3)C5—N1—C1117.8 (3)
N3—C8—H8A118.5C5—N1—Ag1ii120.4 (2)
C7—C8—H8A118.5C1—N1—Ag1ii121.6 (2)
C7—C11—C10117.0 (3)N1—C1—C2121.7 (4)
C7—C11—C12124.8 (3)N1—C1—H1B119.2
C10—C11—C12118.3 (3)C2—C1—H1B119.2
C9—C10—C11119.6 (4)C1—C2—C3120.0 (4)
C9—C10—H10A120.2C1—C2—H2A120.0
C11—C10—H10A120.2C3—C2—H2A120.0
O1—C12—N4122.4 (3)C2—C3—C4119.0 (3)
O1—C12—C11120.8 (3)C2—C3—H3A120.5
N4—C12—C11116.8 (3)C4—C3—H3A120.5
C12—N4—C13121.5 (3)O2—N2—O3121.6 (4)
C12—N4—H4A119.2O2—N2—O4119.9 (4)
C13—N4—H4A119.2O3—N2—O4118.4 (3)
N4—C13—C4114.1 (3)H1WA—O1W—H1WB105.6
N4—C13—H13A108.7
C8—N3—C9—C10−0.2 (6)C11—C12—N4—C13−179.1 (3)
Ag1—N3—C9—C10−175.6 (3)C12—N4—C13—C487.7 (4)
C9—N3—C8—C70.6 (6)N4—C13—C4—C5−160.2 (3)
Ag1—N3—C8—C7175.9 (3)N4—C13—C4—C323.9 (5)
C11—C7—C8—N3−0.5 (7)C3—C4—C5—N11.0 (5)
C8—C7—C11—C10−0.1 (6)C13—C4—C5—N1−175.1 (3)
C8—C7—C11—C12178.4 (4)C4—C5—N1—C1−0.2 (5)
N3—C9—C10—C11−0.3 (6)C4—C5—N1—Ag1ii−174.5 (3)
C7—C11—C10—C90.4 (6)C5—N1—C1—C2−1.5 (6)
C12—C11—C10—C9−178.1 (3)Ag1ii—N1—C1—C2172.8 (3)
C7—C11—C12—O1−171.7 (4)N1—C1—C2—C32.2 (6)
C10—C11—C12—O16.7 (5)C1—C2—C3—C4−1.3 (6)
C7—C11—C12—N47.3 (6)C5—C4—C3—C2−0.3 (5)
C10—C11—C12—N4−174.2 (3)C13—C4—C3—C2175.7 (4)
O1—C12—N4—C130.0 (6)
D—H···AD—HH···AD···AD—H···A
N4—H4A···O1Wiii0.862.042.837 (4)154
O1W—H1WA···O10.851.942.790 (4)174
O1W—H1WB···O3ii0.852.042.886 (4)171
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N4—H4A⋯O1Wi0.862.042.837 (4)154
O1W—H1WA⋯O10.851.942.790 (4)174
O1W—H1WB⋯O3ii0.852.042.886 (4)171

Symmetry codes: (i) ; (ii) .

  2 in total

1.  Pseudo-polyrotaxane and beta-sheet layer-based three-dimensional coordination polymers constructed with silver salts and flexible pyridyl-type ligands.

Authors:  Ming-Liang Tong; Yin-Miao Wu; Jie Ru; Xiao-Ming Chen; Ho-Chol Chang; Susumu Kitagawa
Journal:  Inorg Chem       Date:  2002-09-23       Impact factor: 5.165

2.  Structural invariance in silver(I) coordination networks formed using flexible four-armed thiopyridine ligands.

Authors:  David B Cordes; Lyall R Hanton
Journal:  Inorg Chem       Date:  2007-02-03       Impact factor: 5.165

  2 in total

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