Literature DB >> 21195621

Assortment and packaging of the segmented rotavirus genome.

Sarah M McDonald1, John T Patton.   

Abstract

The rotavirus (RV) genome comprises 11 segments of double-stranded RNA (dsRNA) and is contained within a non-enveloped, icosahedral particle. During assembly, a highly coordinated selective packaging mechanism ensures that progeny RV virions contain one of each genome segment. Cis-acting signals thought to mediate assortment and packaging are associated with putative panhandle structures formed by base-pairing of the ends of RV plus-strand RNAs (+RNAs). Viral polymerases within assembling core particles convert the 11 distinct +RNAs to dsRNA genome segments. It remains unclear whether RV +RNAs are assorted before or during encapsidation, and the functions of viral proteins during these processes are not resolved. However, as reviewed here, recent insights gained from the study of RV and two other segmented RNA viruses, influenza A virus and bacteriophage Φ6, reveal potential mechanisms of RV assortment and packaging. Published by Elsevier Ltd.

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Year:  2010        PMID: 21195621      PMCID: PMC3072067          DOI: 10.1016/j.tim.2010.12.002

Source DB:  PubMed          Journal:  Trends Microbiol        ISSN: 0966-842X            Impact factor:   17.079


  87 in total

1.  Synthesis of plus- and minus-strand RNA in rotavirus-infected cells.

Authors:  S Stacy-Phipps; J T Patton
Journal:  J Virol       Date:  1987-11       Impact factor: 5.103

2.  Rotavirus RNA replication: single-stranded RNA extends from the replicase particle.

Authors:  J T Patton; C O Gallegos
Journal:  J Gen Virol       Date:  1990-05       Impact factor: 3.891

3.  Completion of the genomic sequence of the simian rotavirus SA11: nucleotide sequences of segments 1, 2, and 3.

Authors:  D B Mitchell; G W Both
Journal:  Virology       Date:  1990-07       Impact factor: 3.616

4.  Characterization of rotavirus replication intermediates: a model for the assembly of single-shelled particles.

Authors:  C O Gallegos; J T Patton
Journal:  Virology       Date:  1989-10       Impact factor: 3.616

5.  Molecular biology of rotaviruses. VIII. Quantitative analysis of regulation of gene expression during virus replication.

Authors:  M A Johnson; M A McCrae
Journal:  J Virol       Date:  1989-05       Impact factor: 5.103

6.  Structure and protein composition of the rotavirus replicase particle.

Authors:  J T Patton; C O Gallegos
Journal:  Virology       Date:  1988-10       Impact factor: 3.616

7.  Genome rearrangements of bovine rotavirus after serial passage at high multiplicity of infection.

Authors:  F Hundley; B Biryahwaho; M Gow; U Desselberger
Journal:  Virology       Date:  1985-05       Impact factor: 3.616

8.  Characterization of subviral particles in cells infected with simian rotavirus SA11.

Authors:  M Helmberger-Jones; J T Patton
Journal:  Virology       Date:  1986-12       Impact factor: 3.616

9.  Three-dimensional structure of rotavirus.

Authors:  B V Prasad; G J Wang; J P Clerx; W Chiu
Journal:  J Mol Biol       Date:  1988-01-20       Impact factor: 5.469

10.  Three-dimensional structure of rhesus rotavirus by cryoelectron microscopy and image reconstruction.

Authors:  M Yeager; K A Dryden; N H Olson; H B Greenberg; T S Baker
Journal:  J Cell Biol       Date:  1990-06       Impact factor: 10.539

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  55 in total

1.  In situ Structure of Rotavirus VP1 RNA-Dependent RNA Polymerase.

Authors:  Simon Jenni; Eric N Salgado; Tobias Herrmann; Zongli Li; Timothy Grant; Nikolaus Grigorieff; Stefano Trapani; Leandro F Estrozi; Stephen C Harrison
Journal:  J Mol Biol       Date:  2019-06-21       Impact factor: 5.469

2.  Stepwise expansion of the bacteriophage ϕ6 procapsid: possible packaging intermediates.

Authors:  Daniel Nemecek; Naiqian Cheng; Jian Qiao; Leonard Mindich; Alasdair C Steven; J Bernard Heymann
Journal:  J Mol Biol       Date:  2011-10-12       Impact factor: 5.469

3.  Stability of local secondary structure determines selectivity of viral RNA chaperones.

Authors:  Jack P K Bravo; Alexander Borodavka; Anders Barth; Antonio N Calabrese; Peter Mojzes; Joseph J B Cockburn; Don C Lamb; Roman Tuma
Journal:  Nucleic Acids Res       Date:  2018-09-06       Impact factor: 16.971

4.  Profiling of rotavirus 3'UTR-binding proteins reveals the ATP synthase subunit ATP5B as a host factor that supports late-stage virus replication.

Authors:  Lili Ren; Siyuan Ding; Yanhua Song; Bin Li; Muthukumar Ramanathan; Julia Co; Manuel R Amieva; Paul A Khavari; Harry B Greenberg
Journal:  J Biol Chem       Date:  2019-02-15       Impact factor: 5.157

5.  Development of Stable Rotavirus Reporter Expression Systems.

Authors:  Yuta Kanai; Takahiro Kawagishi; Ryotaro Nouda; Misa Onishi; Pimfhun Pannacha; Jeffery A Nurdin; Keiichiro Nomura; Yoshiharu Matsuura; Takeshi Kobayashi
Journal:  J Virol       Date:  2019-02-05       Impact factor: 5.103

6.  A novel mosquito-borne reassortant orbivirus isolated from Xishuangbanna, China.

Authors:  Shaozhen Xing; Xiaofang Guo; Xianglilan Zhang; Qiumin Zhao; Lingli Li; Shuqing Zuo; Xiaoping An; Guangqian Pei; Qiang Sun; Shi Cheng; Yunfei Wang; Hang Fan; Zhiqiang Mi; Yong Huang; Zhiyi Zhang; Hongning Zhou; Jiusong Zhang; Yigang Tong
Journal:  Virol Sin       Date:  2017-04       Impact factor: 4.327

7.  Generation of genetically stable recombinant rotaviruses containing novel genome rearrangements and heterologous sequences by reverse genetics.

Authors:  Aitor Navarro; Shane D Trask; John T Patton
Journal:  J Virol       Date:  2013-03-27       Impact factor: 5.103

8.  Packaging accessory protein P7 and polymerase P2 have mutually occluding binding sites inside the bacteriophage 6 procapsid.

Authors:  Daniel Nemecek; Jian Qiao; Leonard Mindich; Alasdair C Steven; J Bernard Heymann
Journal:  J Virol       Date:  2012-08-15       Impact factor: 5.103

9.  Reverse Genetics Approach for Developing Rotavirus Vaccine Candidates Carrying VP4 and VP7 Genes Cloned from Clinical Isolates of Human Rotavirus.

Authors:  Yuta Kanai; Misa Onishi; Takahiro Kawagishi; Pimfhun Pannacha; Jeffery A Nurdin; Ryotaro Nouda; Moeko Yamasaki; Tina Lusiany; Pattara Khamrin; Shoko Okitsu; Satoshi Hayakawa; Hirotaka Ebina; Hiroshi Ushijima; Takeshi Kobayashi
Journal:  J Virol       Date:  2020-12-22       Impact factor: 5.103

10.  Reovirus Nonstructural Protein σNS Acts as an RNA Stability Factor Promoting Viral Genome Replication.

Authors:  Paula F Zamora; Liya Hu; Jonathan J Knowlton; Roni M Lahr; Rodolfo A Moreno; Andrea J Berman; B V Venkataram Prasad; Terence S Dermody
Journal:  J Virol       Date:  2018-07-17       Impact factor: 5.103

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