Literature DB >> 21195181

Serine recombinases as tools for genome engineering.

William R A Brown1, Nicholas C O Lee, Zhengyao Xu, Margaret C M Smith.   

Abstract

The serine recombinases differ mechanistically from the tyrosine recombinases and include proteins such as ϕC31 integrase which, unlike Cre and Flp, promote unidirectional reactions. The serine recombinase family is large and includes many other proteins besides ϕC31 integrase with the potential to be widely used in genome engineering. Here we review the details of the mechanism of the reactions promoted by the serine recombinases and discuss how these not only limit the utility of this class of recombinase but also creates opportunities for the engineering of new enzymes. We discuss the unanswered questions posed by genome engineering experiments in a variety of systems in which the serine recombinases have been used and finally describe more recently discovered serine recombinases that have the potential to be used in genome engineering.
Copyright © 2010 Elsevier Inc. All rights reserved.

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Year:  2010        PMID: 21195181     DOI: 10.1016/j.ymeth.2010.12.031

Source DB:  PubMed          Journal:  Methods        ISSN: 1046-2023            Impact factor:   3.608


  39 in total

Review 1.  Streptomyces temperate bacteriophage integration systems for stable genetic engineering of actinomycetes (and other organisms).

Authors:  Richard H Baltz
Journal:  J Ind Microbiol Biotechnol       Date:  2011-12-13       Impact factor: 3.346

Review 2.  The ins and outs of serine integrase site-specific recombination.

Authors:  Karen Rutherford; Gregory D Van Duyne
Journal:  Curr Opin Struct Biol       Date:  2014-02-11       Impact factor: 6.809

Review 3.  Improved mouse models and advanced genetic and genomic technologies for the study of neutrophils.

Authors:  Vishnu Hosur; Daniel A Skelly; Christopher Francis; Benjamin E Low; Vivek Kohar; Lisa M Burzenski; Mansoor M Amiji; Leonard D Shultz; Michael V Wiles
Journal:  Drug Discov Today       Date:  2020-05-05       Impact factor: 7.851

4.  Control of Recombination Directionality by the Listeria Phage A118 Protein Gp44 and the Coiled-Coil Motif of Its Serine Integrase.

Authors:  Sridhar Mandali; Kushol Gupta; Anthony R Dawson; Gregory D Van Duyne; Reid C Johnson
Journal:  J Bacteriol       Date:  2017-05-09       Impact factor: 3.490

5.  Site-specific bacterial chromosome engineering: ΦC31 integrase mediated cassette exchange (IMCE).

Authors:  John R Heil; Jiujun Cheng; Trevor C Charles
Journal:  J Vis Exp       Date:  2012-03-16       Impact factor: 1.355

6.  Coiled-coil interactions mediate serine integrase directionality.

Authors:  Kushol Gupta; Robert Sharp; Jimmy B Yuan; Huiguang Li; Gregory D Van Duyne
Journal:  Nucleic Acids Res       Date:  2017-07-07       Impact factor: 16.971

Review 7.  Genome engineering: Drosophila melanogaster and beyond.

Authors:  Koen J T Venken; Alejandro Sarrion-Perdigones; Paul J Vandeventer; Nicholas S Abel; Audrey E Christiansen; Kristi L Hoffman
Journal:  Wiley Interdiscip Rev Dev Biol       Date:  2015-10-08       Impact factor: 5.814

8.  Serine Integrase attP Binding and Specificity.

Authors:  Huiguang Li; Robert Sharp; Karen Rutherford; Kushol Gupta; Gregory D Van Duyne
Journal:  J Mol Biol       Date:  2018-09-15       Impact factor: 5.469

9.  Gated rotation mechanism of site-specific recombination by ϕC31 integrase.

Authors:  Femi J Olorunniji; Dorothy E Buck; Sean D Colloms; Andrew R McEwan; Margaret C M Smith; W Marshall Stark; Susan J Rosser
Journal:  Proc Natl Acad Sci U S A       Date:  2012-11-12       Impact factor: 11.205

10.  High-throughput 5' UTR engineering for enhanced protein production in non-viral gene therapies.

Authors:  Jicong Cao; Eva Maria Novoa; Zhizhuo Zhang; William C W Chen; Dianbo Liu; Gigi C G Choi; Alan S L Wong; Claudia Wehrspaun; Manolis Kellis; Timothy K Lu
Journal:  Nat Commun       Date:  2021-07-06       Impact factor: 14.919

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