Literature DB >> 21195141

Global genome organization mediated by RNA polymerase III-transcribed genes in fission yeast.

Osamu Iwasaki1, Ken-ichi Noma.   

Abstract

Eukaryotic genomes exist as an elaborate three-dimensional structure in the nucleus. Recent studies have shown that this higher-order organization of the chromatin fiber is coupled to various nuclear processes including transcription. In fission yeast, we demonstrated that RNA polymerase III (Pol III)-transcribed genes such as tRNA and 5S rRNA genes, dispersed throughout chromosomal arm regions, localize to centromeres in interphase. This centromeric association of Pol III genes, mediated by the condensin complex, becomes prominent during mitosis. Here, we discuss potential roles of the Pol III gene-mediated genome organization during interphase and mitosis, and hypothesize that the interphase genome structure serves as a scaffold for the efficient assembly of condensed mitotic chromosomes and that tethering of chromosomal arm regions to centromeres allows chromosomes to properly segregate along the spindle microtubules during anaphase.
Copyright © 2010 Elsevier B.V. All rights reserved.

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Year:  2010        PMID: 21195141      PMCID: PMC3115467          DOI: 10.1016/j.gene.2010.12.011

Source DB:  PubMed          Journal:  Gene        ISSN: 0378-1119            Impact factor:   3.688


  72 in total

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Journal:  Nucleic Acids Res       Date:  2001-07-01       Impact factor: 16.971

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Journal:  Annu Rev Cell Dev Biol       Date:  1996       Impact factor: 13.827

6.  The spindle pole body of Schizosaccharomyces pombe enters and leaves the nuclear envelope as the cell cycle proceeds.

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Journal:  Mol Biol Cell       Date:  1997-08       Impact factor: 4.138

7.  Nucleolar localization of early tRNA processing.

Authors:  E Bertrand; F Houser-Scott; A Kendall; R H Singer; D R Engelke
Journal:  Genes Dev       Date:  1998-08-15       Impact factor: 11.361

Review 8.  Fission yeast cut mutations revisited: control of anaphase.

Authors:  M Yanagida
Journal:  Trends Cell Biol       Date:  1998-04       Impact factor: 20.808

9.  Fission yeast cut3 and cut14, members of a ubiquitous protein family, are required for chromosome condensation and segregation in mitosis.

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Journal:  EMBO J       Date:  1994-10-17       Impact factor: 11.598

10.  A perinucleolar compartment contains several RNA polymerase III transcripts as well as the polypyrimidine tract-binding protein, hnRNP I.

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Journal:  J Cell Biol       Date:  1995-06       Impact factor: 10.539

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  14 in total

1.  Inhibition of activated pericentromeric SINE/Alu repeat transcription in senescent human adult stem cells reinstates self-renewal.

Authors:  Jianrong Wang; Glenn J Geesman; Sirkka Liisa Hostikka; Michelle Atallah; Benjamin Blackwell; Elbert Lee; Peter J Cook; Bogdan Pasaniuc; Goli Shariat; Eran Halperin; Marek Dobke; Michael G Rosenfeld; I King Jordan; Victoria V Lunyak
Journal:  Cell Cycle       Date:  2011-09-01       Impact factor: 4.534

2.  tRNA Genes Affect Chromosome Structure and Function via Local Effects.

Authors:  Omar Hamdani; Namrita Dhillon; Tsung-Han S Hsieh; Takahiro Fujita; Josefina Ocampo; Jacob G Kirkland; Josh Lawrimore; Tetsuya J Kobayashi; Brandon Friedman; Derek Fulton; Kenneth Y Wu; Răzvan V Chereji; Masaya Oki; Kerry Bloom; David J Clark; Oliver J Rando; Rohinton T Kamakaka
Journal:  Mol Cell Biol       Date:  2019-04-02       Impact factor: 4.272

Review 3.  Potential roles of condensin in genome organization and beyond in fission yeast.

Authors:  Kyoung-Dong Kim
Journal:  J Microbiol       Date:  2021-04-20       Impact factor: 3.422

4.  Profiling of the Chromatin-associated Proteome Identifies HP1BP3 as a Novel Regulator of Cell Cycle Progression.

Authors:  Bamaprasad Dutta; Yan Ren; Piliang Hao; Kae Hwan Sim; Esther Cheow; Sunil Adav; James P Tam; Siu Kwan Sze
Journal:  Mol Cell Proteomics       Date:  2014-05-15       Impact factor: 5.911

Review 5.  Unravelling global genome organization by 3C-seq.

Authors:  Hideki Tanizawa; Ken-ichi Noma
Journal:  Semin Cell Dev Biol       Date:  2011-11-18       Impact factor: 7.727

Review 6.  Chromosome domain architecture and dynamic organization of the fission yeast genome.

Authors:  Takeshi Mizuguchi; Jemima Barrowman; Shiv I S Grewal
Journal:  FEBS Lett       Date:  2015-06-19       Impact factor: 4.124

7.  CTCF Recruits Centromeric Protein CENP-E to the Pericentromeric/Centromeric Regions of Chromosomes through Unusual CTCF-Binding Sites.

Authors:  Tiaojiang Xiao; Patompon Wongtrakoongate; Cecelia Trainor; Gary Felsenfeld
Journal:  Cell Rep       Date:  2015-08-28       Impact factor: 9.423

8.  tRNA gene identity affects nuclear positioning.

Authors:  Chris D M Rodley; Dave A Pai; Tyrone A Mills; David R Engelke; Justin M O'Sullivan
Journal:  PLoS One       Date:  2011-12-19       Impact factor: 3.240

9.  Complete DNA sequence of Kuraishia capsulata illustrates novel genomic features among budding yeasts (Saccharomycotina).

Authors:  Lucia Morales; Benjamin Noel; Betina Porcel; Marina Marcet-Houben; Marie-Francoise Hullo; Christine Sacerdot; Fredj Tekaia; Véronique Leh-Louis; Laurence Despons; Varun Khanna; Jean-Marc Aury; Valérie Barbe; Arnaud Couloux; Karen Labadie; Eric Pelletier; Jean-Luc Souciet; Teun Boekhout; Toni Gabaldon; Patrick Wincker; Bernard Dujon
Journal:  Genome Biol Evol       Date:  2013       Impact factor: 3.416

10.  RNA polymerase III-specific general transcription factor IIIC contains a heterodimer resembling TFIIF Rap30/Rap74.

Authors:  Nicholas M I Taylor; Florence Baudin; Gudrun von Scheven; Christoph W Müller
Journal:  Nucleic Acids Res       Date:  2013-08-05       Impact factor: 16.971

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