Literature DB >> 21194954

Syntheses, structures and antibiotic activities of LpxC inhibitors based on the diacetylene scaffold.

Xiaofei Liang1, Chul-Jin Lee, Xin Chen, Hak Suk Chung, Daina Zeng, Christian R H Raetz, Yaoxian Li, Pei Zhou, Eric J Toone.   

Abstract

Compounds inhibiting LpxC in the lipid A biosynthetic pathway are promising leads for novel antibiotics against multidrug-resistant Gram-negative pathogens. We report the syntheses and structural and biochemical characterizations of LpxC inhibitors based on a diphenyl-diacetylene (1,4-diphenyl-1,3-butadiyne) threonyl-hydroxamate scaffold. These studies provide a molecular interpretation for the differential antibiotic activities of compounds with a substituted distal phenyl ring as well as the absolute stereochemical requirement at the C2, but not C3, position of the threonyl group. Copyright Â
© 2010 Elsevier Ltd. All rights reserved.

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Year:  2010        PMID: 21194954      PMCID: PMC3035996          DOI: 10.1016/j.bmc.2010.12.017

Source DB:  PubMed          Journal:  Bioorg Med Chem        ISSN: 0968-0896            Impact factor:   3.641


  21 in total

Review 1.  Lipopolysaccharide endotoxins.

Authors:  Christian R H Raetz; Chris Whitfield
Journal:  Annu Rev Biochem       Date:  2001-11-09       Impact factor: 23.643

2.  Coot: model-building tools for molecular graphics.

Authors:  Paul Emsley; Kevin Cowtan
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2004-11-26

3.  On the attribution and additivity of binding energies.

Authors:  W P Jencks
Journal:  Proc Natl Acad Sci U S A       Date:  1981-07       Impact factor: 11.205

4.  Binding of uridine 5'-diphosphate in the "basic patch" of the zinc deacetylase LpxC and implications for substrate binding.

Authors:  Heather A Gennadios; David W Christianson
Journal:  Biochemistry       Date:  2006-11-30       Impact factor: 3.162

5.  A slow, tight-binding inhibitor of the zinc-dependent deacetylase LpxC of lipid A biosynthesis with antibiotic activity comparable to ciprofloxacin.

Authors:  Amanda L McClerren; Stephanie Endsley; Jason L Bowman; Niels H Andersen; Ziqiang Guan; Johannes Rudolph; Christian R H Raetz
Journal:  Biochemistry       Date:  2005-12-20       Impact factor: 3.162

6.  Site-directed mutagenesis of the bacterial metalloamidase UDP-(3-O-acyl)-N-acetylglucosamine deacetylase (LpxC). Identification of the zinc binding site.

Authors:  J E Jackman; C R Raetz; C A Fierke
Journal:  Biochemistry       Date:  2001-01-16       Impact factor: 3.162

7.  Preparation and Use of Aziridino Alcohols as Promoters for the Enantioselective Addition of Dialkylzinc Reagents to N-(Diphenylphosphinoyl) Imines.

Authors:  Pher G. Andersson; David Guijarro; David Tanner
Journal:  J Org Chem       Date:  1997-10-17       Impact factor: 4.354

8.  Potent, novel in vitro inhibitors of the Pseudomonas aeruginosa deacetylase LpxC.

Authors:  Toni Kline; Niels H Andersen; Eric A Harwood; Jason Bowman; Andre Malanda; Stephanie Endsley; Alice L Erwin; Michael Doyle; Susan Fong; Alex L Harris; Brian Mendelsohn; Khisimuzi Mdluli; Christian R H Raetz; C Kendall Stover; Pamela R Witte; Asha Yabannavar; Shuguang Zhu
Journal:  J Med Chem       Date:  2002-07-04       Impact factor: 7.446

9.  High-throughput catch-and-release synthesis of oxazoline hydroxamates. Structure-activity relationships in novel inhibitors of Escherichia coli LpxC: in vitro enzyme inhibition and antibacterial properties.

Authors:  Michael C Pirrung; L Nathan Tumey; Amanda L McClerren; Christian R H Raetz
Journal:  J Am Chem Soc       Date:  2003-02-12       Impact factor: 15.419

10.  The nucleotide-binding site of Aquifex aeolicus LpxC.

Authors:  Lori Buetow; Alice Dawson; William N Hunter
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2006-10-25
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  28 in total

1.  Disrupting Gram-Negative Bacterial Outer Membrane Biosynthesis through Inhibition of the Lipopolysaccharide Transporter MsbA.

Authors:  Mary Kate Alexander; Anh Miu; Angela Oh; Mike Reichelt; Hoangdung Ho; Cecile Chalouni; Sharada Labadie; Lan Wang; Jun Liang; Nicholas N Nickerson; Huiyong Hu; Lan Yu; Miaofen Du; Donghong Yan; Summer Park; Janice Kim; Min Xu; Benjamin D Sellers; Hans E Purkey; Nicholas J Skelton; Michael F T Koehler; Jian Payandeh; Vishal Verma; Yiming Xu; Christopher M Koth; Mireille Nishiyama
Journal:  Antimicrob Agents Chemother       Date:  2018-10-24       Impact factor: 5.191

Review 2.  Targeting Metalloenzymes for Therapeutic Intervention.

Authors:  Allie Y Chen; Rebecca N Adamek; Benjamin L Dick; Cy V Credille; Christine N Morrison; Seth M Cohen
Journal:  Chem Rev       Date:  2018-09-07       Impact factor: 60.622

3.  Structural basis of the promiscuous inhibitor susceptibility of Escherichia coli LpxC.

Authors:  Chul-Jin Lee; Xiaofei Liang; Ramesh Gopalaswamy; Javaria Najeeb; Eugene D Ark; Eric J Toone; Pei Zhou
Journal:  ACS Chem Biol       Date:  2013-10-31       Impact factor: 5.100

4.  LpxC Inhibitors: Design, Synthesis, and Biological Evaluation of Oxazolidinones as Gram-negative Antibacterial Agents.

Authors:  Haruaki Kurasaki; Kosuke Tsuda; Mariko Shinoyama; Noriko Takaya; Yuko Yamaguchi; Ryuta Kishii; Kazuhiko Iwase; Naoki Ando; Masahiro Nomura; Yasushi Kohno
Journal:  ACS Med Chem Lett       Date:  2016-04-05       Impact factor: 4.345

5.  Synthesis, Structure, and SAR of Tetrahydropyran-Based LpxC Inhibitors.

Authors:  Kerry E Murphy-Benenato; Nelson Olivier; Allison Choy; Philip L Ross; Matthew D Miller; Jason Thresher; Ning Gao; Michael R Hale
Journal:  ACS Med Chem Lett       Date:  2014-09-23       Impact factor: 4.345

Review 6.  Antibacterial Drug Discovery Targeting the Lipopolysaccharide Biosynthetic Enzyme LpxC.

Authors:  Alice L Erwin
Journal:  Cold Spring Harb Perspect Med       Date:  2016-07-01       Impact factor: 6.915

7.  Lipooligosaccharide is required for the generation of infectious elementary bodies in Chlamydia trachomatis.

Authors:  Bidong D Nguyen; Doreen Cunningham; Xiaofei Liang; Xin Chen; Eric J Toone; Christian R H Raetz; Pei Zhou; Raphael H Valdivia
Journal:  Proc Natl Acad Sci U S A       Date:  2011-05-31       Impact factor: 11.205

Review 8.  Structure, inhibition, and regulation of essential lipid A enzymes.

Authors:  Pei Zhou; Jinshi Zhao
Journal:  Biochim Biophys Acta Mol Cell Biol Lipids       Date:  2016-12-09       Impact factor: 4.698

9.  Mutants resistant to LpxC inhibitors by rebalancing cellular homeostasis.

Authors:  Daina Zeng; Jinshi Zhao; Hak Suk Chung; Ziqiang Guan; Christian R H Raetz; Pei Zhou
Journal:  J Biol Chem       Date:  2013-01-11       Impact factor: 5.157

10.  A Scalable Synthesis of the Difluoromethyl-allo-threonyl Hydroxamate-Based LpxC Inhibitor LPC-058.

Authors:  Xiaofei Liang; Ramesh Gopalaswamy; Frank Navas; Eric J Toone; Pei Zhou
Journal:  J Org Chem       Date:  2016-05-06       Impact factor: 4.354

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