Literature DB >> 21192676

The proapoptotic G41S mutation to human cytochrome c alters the heme electronic structure and increases the electron self-exchange rate.

Matthew D Liptak1, Robert D Fagerlund, Elizabeth C Ledgerwood, Sigurd M Wilbanks, Kara L Bren.   

Abstract

The naturally occurring G41S mutation to human (Hs) cytochrome (cyt) c enhances apoptotic activity based upon previous in vitro and in vivo studies, but the molecular mechanism underlying this enhancement remains unknown. Here, X-ray crystallography, nuclear magnetic resonance (NMR) spectroscopy, and density functional theory (DFT) calculations have been used to identify the structural and electronic differences between wild-type (WT) and G41S Hs cyt c. S41 is part of the hydrogen bonding network for propionate 7 of heme pyrrole ring A in the X-ray structure of G41S Hs cyt c and, compared to WT, G41S Hs cyt c has increased spin density on pyrrole ring C and a faster electron self-exchange rate. DFT calculations illustrate an electronic mechanism where structural changes near ring A can result in electronic changes at ring C. Since ring C is part of the solvent-exposed protein surface, we propose that this heme electronic structure change may ultimately be responsible for the enhanced proapoptotic activity of G41S Hs cyt c.

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Year:  2010        PMID: 21192676      PMCID: PMC3034155          DOI: 10.1021/ja106328k

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  12 in total

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Authors:  L Banci; I Bertini; A Rosato; G Varani
Journal:  J Biol Inorg Chem       Date:  1999-12       Impact factor: 3.358

2.  Electrostatic and steric control of electron self-exchange in cytochromes c, c551, and b5.

Authors:  D W Dixon; X Hong; S E Woehler
Journal:  Biophys J       Date:  1989-08       Impact factor: 4.033

3.  Stability and apoptotic activity of recombinant human cytochrome c.

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4.  Specific ablation of the apoptotic functions of cytochrome C reveals a differential requirement for cytochrome C and Apaf-1 in apoptosis.

Authors:  Zhenyue Hao; Gordon S Duncan; Chia-Che Chang; Andrew Elia; Min Fang; Andrew Wakeham; Hitoshi Okada; Thomas Calzascia; YingJu Jang; Annick You-Ten; Wen-Chen Yeh; Pamela Ohashi; Xiaodong Wang; Tak W Mak
Journal:  Cell       Date:  2005-05-20       Impact factor: 41.582

5.  Optimization of magnetization transfer experiments to measure first-order rate constants and spin-lattice relaxation times.

Authors:  H Katki; G H Weiss; J E Kiefer; H Taitelbaum; R G Spencer
Journal:  NMR Biomed       Date:  1996-05       Impact factor: 4.044

6.  Expression and characterization of recombinant human cytochrome c in E. coli.

Authors:  Wen-Yih Jeng; Chiu-Yueh Chen; Hsien-Chang Chang; Woei-Jer Chuang
Journal:  J Bioenerg Biomembr       Date:  2002-12       Impact factor: 2.945

7.  Conformation change of cytochrome c. I. Ferrocytochrome c structure refined at 1.5 A resolution.

Authors:  T Takano; R E Dickerson
Journal:  J Mol Biol       Date:  1981-11-25       Impact factor: 5.469

8.  Structure of an apoptosome-procaspase-9 CARD complex.

Authors:  Shujun Yuan; Xinchao Yu; Maya Topf; Steven J Ludtke; Xiaodong Wang; Christopher W Akey
Journal:  Structure       Date:  2010-05-12       Impact factor: 5.006

9.  A mutation of human cytochrome c enhances the intrinsic apoptotic pathway but causes only thrombocytopenia.

Authors:  Ian M Morison; Elisabeth M Cramer Bordé; Emma J Cheesman; Pak Leng Cheong; Andrew J Holyoake; Serge Fichelson; Robert J Weeks; Alexandra Lo; Stefan M K Davies; Sigurd M Wilbanks; Robert D Fagerlund; Mathew W Ludgate; Fernanda M da Silva Tatley; Melanie S A Coker; Nicholas A Bockett; Gillian Hughes; Diana A Pippig; Mark P Smith; Claude Capron; Elizabeth C Ledgerwood
Journal:  Nat Genet       Date:  2008-03-16       Impact factor: 38.330

Review 10.  Regulation of apoptosis by the redox state of cytochrome c.

Authors:  Guy C Brown; Vilmante Borutaite
Journal:  Biochim Biophys Acta       Date:  2008-04-03
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  14 in total

Review 1.  Cytochrome c: the Achilles' heel in apoptosis.

Authors:  A V Kulikov; E S Shilov; I A Mufazalov; V Gogvadze; S A Nedospasov; B Zhivotovsky
Journal:  Cell Mol Life Sci       Date:  2011-12-17       Impact factor: 9.261

2.  Naturally Occurring A51V Variant of Human Cytochrome c Destabilizes the Native State and Enhances Peroxidase Activity.

Authors:  Haotian Lei; Bruce E Bowler
Journal:  J Phys Chem B       Date:  2019-10-14       Impact factor: 2.991

3.  Remote Perturbations in Tertiary Contacts Trigger Ligation of Lysine to the Heme Iron in Cytochrome c.

Authors:  Jie Gu; Dong-Woo Shin; Ekaterina V Pletneva
Journal:  Biochemistry       Date:  2017-05-31       Impact factor: 3.162

4.  Effect of a K72A Mutation on the Structure, Stability, Dynamics, and Peroxidase Activity of Human Cytochrome c.

Authors:  Shiloh M Nold; Haotian Lei; Tung-Chung Mou; Bruce E Bowler
Journal:  Biochemistry       Date:  2017-06-21       Impact factor: 3.162

5.  The K79G Mutation Reshapes the Heme Crevice and Alters Redox Properties of Cytochrome c.

Authors:  Yunling Deng; Fangfang Zhong; Stephanie L Alden; Kevin R Hoke; Ekaterina V Pletneva
Journal:  Biochemistry       Date:  2018-09-24       Impact factor: 3.162

6.  Conformational change and human cytochrome c function: mutation of residue 41 modulates caspase activation and destabilizes Met-80 coordination.

Authors:  Tracy M Josephs; Matthew D Liptak; Gillian Hughes; Alexandra Lo; Rebecca M Smith; Sigurd M Wilbanks; Kara L Bren; Elizabeth C Ledgerwood
Journal:  J Biol Inorg Chem       Date:  2013-01-19       Impact factor: 3.358

7.  Interspecies Variation in the Functional Consequences of Mutation of Cytochrome c.

Authors:  Tracy M Josephs; Moira E Hibbs; Lily Ong; Ian M Morison; Elizabeth C Ledgerwood
Journal:  PLoS One       Date:  2015-06-18       Impact factor: 3.240

8.  Lysine carbonylation is a previously unrecognized contributor to peroxidase activation of cytochrome c by chloramine-T.

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9.  The selective interaction between silica nanoparticles and enzymes from molecular dynamics simulations.

Authors:  Xiaotian Sun; Zhiwei Feng; Liling Zhang; Tingjun Hou; Youyong Li
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10.  Increased dynamics in the 40-57 Ω-loop of the G41S variant of human cytochrome c promote its pro-apoptotic conformation.

Authors:  Andreas Ioannis Karsisiotis; Oliver M Deacon; Michael T Wilson; Colin Macdonald; Tharin M A Blumenschein; Geoffrey R Moore; Jonathan A R Worrall
Journal:  Sci Rep       Date:  2016-07-27       Impact factor: 4.379

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