Literature DB >> 21191383

Biclustering of adverse drug events in the FDA's spontaneous reporting system.

R Harpaz1, H Perez, H S Chase, R Rabadan, G Hripcsak, C Friedman.   

Abstract

In this article, we present a new pharmacovigilance data mining technique based on the biclustering paradigm, which is designed to identify drug groups that share a common set of adverse events (AEs) in the spontaneous reporting system (SRS) of the US Food and Drug Administration (FDA). A taxonomy of biclusters is developed, revealing that a significant number of bona fide adverse drug event (ADE) biclusters have been identified. Statistical tests indicate that it is extremely unlikely that the bicluster structures thus discovered, as well as their content, could have arisen by mere chance. Some of the biclusters classified as indeterminate provide support for previously unrecognized and potentially novel ADEs. In addition, we demonstrate the potential importance of the proposed methodology in several important aspects of pharmacovigilance such as providing insight into the etiology of ADEs, facilitating the identification of novel ADEs, suggesting methods and a rationale for aggregating terminologies, highlighting areas of focus, and providing an exploratory tool for data mining.

Entities:  

Mesh:

Year:  2010        PMID: 21191383      PMCID: PMC3282185          DOI: 10.1038/clpt.2010.285

Source DB:  PubMed          Journal:  Clin Pharmacol Ther        ISSN: 0009-9236            Impact factor:   6.875


  18 in total

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  26 in total

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5.  Finding Causal Mechanistic Drug-Drug Interactions from Observational Data.

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Review 8.  Novel data-mining methodologies for adverse drug event discovery and analysis.

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9.  Mining Directional Drug Interaction Effects on Myopathy Using the FAERS Database.

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