Literature DB >> 21189841

Engineering a novel self-powering electrochemical biosensor.

X Gu, M Trybiło, S Ramsay, M Jensen, R Fulton, S Rosser, D Gilbert.   

Abstract

This paper records the efforts of a multi-disciplinary team of undergraduate students from Glasgow University to collectively design and carry out a 10 week project in Synthetic Biology as part of the international Genetic Engineered Machine competition (iGEM). The aim of the project was to design and build a self-powering electrochemical biosensor called 'ElectrEcoBlu'. The novelty of this engineered machine lies in coupling a biosensor with a microbial fuel cell to transduce a pollution input into an easily measurable electrical output signal. The device consists of two components; the sensor element which is modular, allowing for customisation to detect a range of input signals as required, and the universal reporter element which is responsible for generating an electrical signal as an output. The genetic components produce pyocyanin, a competitive electron mediator for microbial fuel cells, thus enabling the generation of an electrical current in the presence of target chemical pollutants. The pollutants tested in our implementation were toluene and salicylate. ElectrEcoBlu is expected to drive forward the development of a new generation of biosensors. Our approach exploited a range of state-of-the-art modelling techniques in a unified framework of qualitative, stochastic and continuous approaches to support the design and guide the construction of this novel biological machine. This work shows that integrating engineering techniques with scientific methodologies can provide new insights into genetic regulation and can be considered as a reference framework for the development of biochemical systems in synthetic biology.

Entities:  

Keywords:  Biosensor; Computational modelling; Genetic engineering; Synthetic biology

Year:  2010        PMID: 21189841      PMCID: PMC2955201          DOI: 10.1007/s11693-010-9063-2

Source DB:  PubMed          Journal:  Syst Synth Biol        ISSN: 1872-5325


  21 in total

1.  Intracellular production of superoxide radical and of hydrogen peroxide by redox active compounds.

Authors:  H M Hassan; I Fridovich
Journal:  Arch Biochem Biophys       Date:  1979-09       Impact factor: 4.013

2.  Recent advances in biosensor techniques for environmental monitoring.

Authors:  K R Rogers
Journal:  Anal Chim Acta       Date:  2006-02-15       Impact factor: 6.558

3.  Snoopy--a unifying Petri net framework to investigate biomolecular networks.

Authors:  Christian Rohr; Wolfgang Marwan; Monika Heiner
Journal:  Bioinformatics       Date:  2010-02-07       Impact factor: 6.937

4.  Determination of the dissociation constants for recombinant c-Myc, Max, and DNA complexes: the inhibitory effect of linoleic acid on the DNA-binding step.

Authors:  Kyung Chae Jung; Ho Sung Rhee; Chi Hoon Park; Chul-Hak Yang
Journal:  Biochem Biophys Res Commun       Date:  2005-08-19       Impact factor: 3.575

5.  Nucleotide sequence of the regulatory gene xylR of the TOL plasmid from Pseudomonas putida.

Authors:  S Inouye; A Nakazawa; T Nakazawa
Journal:  Gene       Date:  1988-06-30       Impact factor: 3.688

6.  Protein degradation in Escherichia coli. I. Measurement of rapidly and slowly decaying components.

Authors:  K Nath; A L Koch
Journal:  J Biol Chem       Date:  1970-06-10       Impact factor: 5.157

7.  Functional analysis of genes for biosynthesis of pyocyanin and phenazine-1-carboxamide from Pseudomonas aeruginosa PAO1.

Authors:  D V Mavrodi; R F Bonsall; S M Delaney; M J Soule; G Phillips; L S Thomashow
Journal:  J Bacteriol       Date:  2001-11       Impact factor: 3.490

8.  2,4-Dinitrotoluene dioxygenase from Burkholderia sp. strain DNT: similarity to naphthalene dioxygenase.

Authors:  W C Suen; B E Haigler; J C Spain
Journal:  J Bacteriol       Date:  1996-08       Impact factor: 3.490

9.  Development and testing of a bacterial biosensor for toluene-based environmental contaminants.

Authors:  B M Willardson; J F Wilkins; T A Rand; J M Schupp; K K Hill; P Keim; P J Jackson
Journal:  Appl Environ Microbiol       Date:  1998-03       Impact factor: 4.792

Review 10.  Dinitrotoluene: acute toxicity, oncogenicity, genotoxicity, and metabolism.

Authors:  D E Rickert; B E Butterworth; J A Popp
Journal:  Crit Rev Toxicol       Date:  1984       Impact factor: 5.635

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  1 in total

1.  Modular design of artificial tissue homeostasis: robust control through synthetic cellular heterogeneity.

Authors:  Miles Miller; Marc Hafner; Eduardo Sontag; Noah Davidsohn; Sairam Subramanian; Priscilla E M Purnick; Douglas Lauffenburger; Ron Weiss
Journal:  PLoS Comput Biol       Date:  2012-07-19       Impact factor: 4.475

  1 in total

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