Literature DB >> 2118960

Sixteen discrete RNA components in the cytoplasmic ribosome of Euglena gracilis.

M N Schnare1, M W Gray.   

Abstract

We have isolated cytoplasmic ribosomes from Euglena gracilis and characterized the RNA components of these particles. We show here that instead of the four rRNAs (17-19 S, 25-28 S, 5.8 S and 5 S) found in typical eukaryotic ribosomes, Euglena cytoplasmic ribosomes contain 16 RNA components. Three of these Euglena rRNAs are the structural equivalents of the 17-19 S, 5.8 S and 5 S rRNAs of other eukaryotes. However, the equivalent of 25-28 S rRNA is found in Euglena as 13 separate RNA species. We demonstrate that together with 5 S and 5.8 S rRNA, these 13 RNAs are all components of the large ribosomal subunit, while a 19 S RNA is the sole RNA component of the small ribosomal subunit. Two of the 13 pieces of 25-28 S rRNA are not tightly bound to the large ribosomal subunit and are released at low (0 to 0.1 mM) magnesium ion concentrations. We present here the complete primary sequences of each of the 14 RNA components (including 5.8 S rRNA) of Euglena large subunit rRNA. Sequence comparisons and secondary structure modeling indicate that these 14 RNAs exist as a non-covalent network that together must perform the functions attributed to the covalently continuous, high molecular weight, large subunit rRNA from other systems.

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Year:  1990        PMID: 2118960     DOI: 10.1016/S0022-2836(05)80096-8

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  35 in total

1.  Analysis of intergenic spacer transcripts suggests 'read-around' transcription of the extrachromosomal circular rDNA in Euglena gracilis.

Authors:  S J Greenwood; M N Schnare; J R Cook; M W Gray
Journal:  Nucleic Acids Res       Date:  2001-05-15       Impact factor: 16.971

2.  A compilation of large subunit (23S- and 23S-like) ribosomal RNA structures.

Authors:  R R Gutell; M N Schnare; M W Gray
Journal:  Nucleic Acids Res       Date:  1992-05-11       Impact factor: 16.971

3.  A genome-wide analysis of C/D and H/ACA-like small nucleolar RNAs in Trypanosoma brucei reveals a trypanosome-specific pattern of rRNA modification.

Authors:  Xue-Hai Liang; Shai Uliel; Avraham Hury; Sarit Barth; Tirza Doniger; Ron Unger; Shulamit Michaeli
Journal:  RNA       Date:  2005-05       Impact factor: 4.942

4.  Reconstitution of enzymatic activity from fragments of M1 RNA.

Authors:  C Guerrier-Takada; S Altman
Journal:  Proc Natl Acad Sci U S A       Date:  1992-02-15       Impact factor: 11.205

5.  In Euglena, spliced-leader RNA (SL-RNA) and 5S rRNA genes are tandemly repeated.

Authors:  M Keller; L H Tessier; R L Chan; J H Weil; P Imbault
Journal:  Nucleic Acids Res       Date:  1992-04-11       Impact factor: 16.971

6.  Identification of additional rRNA fragments encoded by the Plasmodium falciparum 6 kb element.

Authors:  J E Feagin; B L Mericle; E Werner; M Morris
Journal:  Nucleic Acids Res       Date:  1997-01-15       Impact factor: 16.971

7.  Genome-wide analysis of small nucleolar RNAs of Leishmania major reveals a rich repertoire of RNAs involved in modification and processing of rRNA.

Authors:  Dror Eliaz; Tirza Doniger; Itai Dov Tkacz; Viplov Kumar Biswas; Sachin Kumar Gupta; Nikolay G Kolev; Ron Unger; Elisabetta Ullu; Christian Tschudi; Shulamit Michaeli
Journal:  RNA Biol       Date:  2015-05-13       Impact factor: 4.652

8.  Evolutionary appearance of genes encoding proteins associated with box H/ACA snoRNAs: cbf5p in Euglena gracilis, an early diverging eukaryote, and candidate Gar1p and Nop10p homologs in archaebacteria.

Authors:  Y Watanabe; M W Gray
Journal:  Nucleic Acids Res       Date:  2000-06-15       Impact factor: 16.971

9.  An rRNA variable region has an evolutionarily conserved essential role despite sequence divergence.

Authors:  R Sweeney; L Chen; M C Yao
Journal:  Mol Cell Biol       Date:  1994-06       Impact factor: 4.272

10.  U3 snoRNA genes are multi-copy and frequently linked to U5 snRNA genes in Euglena gracilis.

Authors:  J Michael Charette; Michael W Gray
Journal:  BMC Genomics       Date:  2009-11-16       Impact factor: 3.969

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