Literature DB >> 21187076

Solution structure of Rap1 BRCT domain from Saccharomyces cerevisiae reveals a novel fold.

Wen Zhang1, Jiahai Zhang, Xuecheng Zhang, Chao Xu, Xiaoming Tu.   

Abstract

Rap1 (repressor-activator protein 1) from Saccharomyces cerevisiae, containing a BRCT domain at its N-terminus, is a multifunctional protein that controls telomere function, silencing, and the activation of glycolytic and ribosomal protein genes. In this work, we determined the solution structure of Rap1 BRCT domain, which contains three β-strands and three α-helices. Structural comparison indicated that Rap1 BRCT domain adopts a global fold similar to other BRCT domains, implying some common structural aspects of BRCT domain family. On the other hand, Rap1 BRCT domain displays structural characteristics significantly different from other BRCT domains in that Rap1 BRCT domain adopts a rather flexible conformation with less secondary structure elements, revealing a novel fold of the BRCT domain family. Crown
Copyright © 2010. Published by Elsevier Inc. All rights reserved.

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Year:  2010        PMID: 21187076     DOI: 10.1016/j.bbrc.2010.12.109

Source DB:  PubMed          Journal:  Biochem Biophys Res Commun        ISSN: 0006-291X            Impact factor:   3.575


  8 in total

1.  Identification of a transcriptional activation domain in yeast repressor activator protein 1 (Rap1) using an altered DNA-binding specificity variant.

Authors:  Amanda N Johnson; P Anthony Weil
Journal:  J Biol Chem       Date:  2017-02-14       Impact factor: 5.157

Review 2.  Telomerase and telomere-associated proteins: structural insights into mechanism and evolution.

Authors:  Karen A Lewis; Deborah S Wuttke
Journal:  Structure       Date:  2012-01-11       Impact factor: 5.006

3.  Molecular Dynamics Simulation of Rap1 Myb-type domain in Saccharomyces cerevisiae.

Authors:  Koel Mukherjee; Dev Mani Pandey; Ambarish Saran Vidyarthi
Journal:  Bioinformation       Date:  2012-09-21

4.  The orientation of the C-terminal domain of the Saccharomyces cerevisiae Rap1 protein is determined by its binding to DNA.

Authors:  Béatrice Matot; Yann-Vaï Le Bihan; Rachel Lescasse; Javier Pérez; Simona Miron; Gabriel David; Bertrand Castaing; Patrick Weber; Bertrand Raynal; Sophie Zinn-Justin; Sylvaine Gasparini; Marie-Hélène Le Du
Journal:  Nucleic Acids Res       Date:  2011-12-01       Impact factor: 16.971

5.  Heterochromatin formation via recruitment of DNA repair proteins.

Authors:  Jacob G Kirkland; Misty R Peterson; Christopher D Still; Leo Brueggeman; Namrita Dhillon; Rohinton T Kamakaka
Journal:  Mol Biol Cell       Date:  2015-01-28       Impact factor: 4.138

6.  IUPred3: prediction of protein disorder enhanced with unambiguous experimental annotation and visualization of evolutionary conservation.

Authors:  Gábor Erdős; Mátyás Pajkos; Zsuzsanna Dosztányi
Journal:  Nucleic Acids Res       Date:  2021-07-02       Impact factor: 16.971

7.  A higher-order entity formed by the flexible assembly of RAP1 with TRF2.

Authors:  Guillaume Gaullier; Simona Miron; Sabrina Pisano; Rémi Buisson; Yann-Vaï Le Bihan; Carine Tellier-Lebègue; Wala Messaoud; Pierre Roblin; Beatriz G Guimarães; Robert Thai; Marie-Josèphe Giraud-Panis; Eric Gilson; Marie-Hélène Le Du
Journal:  Nucleic Acids Res       Date:  2016-01-08       Impact factor: 16.971

8.  Dependence of Protein Structure on Environment: FOD Model Applied to Membrane Proteins.

Authors:  Irena Roterman; Katarzyna Stapor; Krzysztof Gądek; Tomasz Gubała; Piotr Nowakowski; Piotr Fabian; Leszek Konieczny
Journal:  Membranes (Basel)       Date:  2021-12-30
  8 in total

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